*2026/01/14 14:49:58.36 *IOS HEADER VERSION 2.0 2016/04/28 2016/06/13 IVF16 *FILE START TIME : UTC 2024/10/23 20:38:25.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 15 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : 63C5323E NUMBER OF CHANNELS : 25 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- ---------------------------- --------------- -------------- -------------- 1 Bottle_Number n/a 1 15 2 Bottle:Firing_Sequence n/a 1 15 3 Pressure decibar 1.789 401.4 4 Depth metres 1.773 397.475 5 Temperature:Secondary 'deg C (ITS90)' 7.1758 11.0272 6 Transmissivity %/metre 42.3 51.2 7 Transmissivity:Green %/metre 61.1 89.4 8 Fluorescence:URU:Seapoint mg/m^3 0.134 0.546 9 Fluorescence:URU:Wetlabs mg/m^3 0.5E-01 0.818 10 Salinity:T1:C1 PSS-78 24.0409 33.0558 11 Oxygen:Dissolved:SBE mL/L 0.716 5.196 12 Conductivity:Secondary S/m 2.750448 3.477772 13 Number_of_bin_records n/a 30 241 14 Sample_Number n/a 410 424 15 Salinity:Bottle PSS-78 23.442 33.054 16 Flag:Salinity:Bottle n/a 17 Chlorophyll:Extracted mg/m^3 0.4E-01 0.41 18 Flag:Chlorophyll:Extracted n/a 19 Phaeo-Pigment:Extracted mg/m^3 0.8E-01 0.16 20 Nitrate_plus_Nitrite umol/L 14.63 31.93 21 Flag:Nitrate_plus_Nitrite n/a 22 Silicate umol/L 29.41 81.49 23 Flag:Silicate n/a 24 Phosphate umol/L 1.222 3.09 25 Flag:Phosphate n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 3 I I 0 2 -99 ' ' 3 I I 0 3 -99 ' ' 7 F ' ' 1 4 -99 ' ' 7 F ' ' 1 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 6 F ' ' 1 7 -99 ' ' 6 F ' ' 1 8 -99 ' ' 8 F ' ' 3 9 -99 ' ' 8 F ' ' 3 10 -99 ' ' 9 F ' ' 4 11 -99 ' ' 7 F ' ' 2 12 -99 ' ' 10 F ' ' 5 13 -99 ' ' 5 I I 0 14 -99 ' ' 5 I I 0 15 -99 ' ' 9 F R4 4 16 0 ' ' 3 NQ C ' ' 17 -99 ' ' 7 F R4 2 18 0 ' ' 3 NQ C ' ' 19 -99 ' ' 7 F R4 2 20 -99 ' ' 7 F R4 2 21 0 ' ' 3 NQ C ' ' 22 -99 ' ' 7 F R4 2 23 0 ' ' 3 NQ C ' ' 24 -99 ' ' 8 F R4 3 25 0 ' ' 3 NQ C ' ' $END $REMARKS Quality flags have the following significance: ---------------------------------------------------------------------------------- 0 = Acceptable measurement with no header comment 1 = Sample for this measurement was collected but not analyzed. Sample lost. 2 = Acceptable measurement with header comment 3 = Questionable measurement (Probably Good) 4 = Poor measurement (Probably Bad) 5 = Measurement not reported (Bad) 6 = Mean of replicate measurements 7 = Manual chromatographic peak measurement 8 = Irregular digital chromatographic peak integration 9 = Sample was planned for this measurement from this bottle but was not collected ---------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2024-066 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : Inlets SCIENTIST : Spear D. PLATFORM : Vector *LOCATION GEOGRAPHIC AREA : B.C. Inlets STATION : KY1 EVENT NUMBER : 89 LATITUDE : 52 45.06000 N ! (deg min) LONGITUDE : 127 59.55000 W ! (deg min) WATER DEPTH : 406 ALTIMETER (M) : 5.05 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 1453 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------------- -------------- ---------- Temperature ' ' 2023 Conductivity ' ' 3500 'Pressure:Digiquartz with TC' ' ' 1453 Temperature:2 ' ' 6565 Conductivity:2 ' ' 5043 'Oxygen:SBE 43' ' ' 1438 Fluorometer:Seapoint ' ' 3640 Altimeter ' ' 73171 'Fluorometer:WET Labs ECO-AFL/FL' ' ' FLRTD-2216 'Transmissometer:WET Labs C-Star' ' ' 1185DR 'Transmissometer:WET Labs C-Star:2' ' ' 1883DG $END $REMARKS Software Version Seasave V 7.26.7.121 Comments from secondary file: E:\Telework\2024-066\Processing\hydro\2024-066-0089.mrgcln1s ------------------------------------------------------------ Software Version Seasave V 7.26.7.121 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 4.3 2025/12/09 13:27:29 2582 2582 CLEAN 5.3 2025/12/09 13:27:55 2582 2582 ADDSAMP 3.6 2025/12/09 14:39:53 2582 2582 BINAVE 4.2.1 2025/12/09 14:40:01 2582 15 HDREDIT2 3.2 2025/12/10 11:46:09 ? ? MERGE 3.6 2026/01/08 13:28:41 15 15 CLEAN 5.3 2026/01/08 14:14:25 15 15 CALIB 12.1 2026/01/08 14:14:55 15 15 CALIB 12.1 2026/01/08 14:16:48 15 15 SORT 3.6 2026/01/14 14:04:50 15 15 REMOVECH 8.2 2026/01/14 14:06:34 15 15 CHGUNITS 3.2 2026/01/14 14:49:15 15 15 CHGUNITS 3.2 2026/01/14 14:49:34 15 15 REORDER 1.3.1 2026/01/14 14:49:52 ? ? HDREDIT2 3.2 2026/01/14 14:49:58 ? ? $END $REMARKS -CLEAN functions: 2025/12/09 13:27:47 20 Reset #RECS, MIN & MAX values in header. Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: E:\Telework\2024-066\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -HEADER EDITS: 2025/12/10 11:46:09 Channel 3: Bottle:Firing_Sequence [n/a] Name: Bottle_Number ==> Bottle:Firing_Sequence Channel 2: Bottle_Number [n/a] Name: Bottle:Position ==> Bottle_Number -The following MERGE parameters were used: 2026/01/08 13:28:41 Merge Channel: Bottle_Number Merge Scheme Used: 4: Add Secondary to Matching Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Phaeo-Pigment:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Temperature:Draw, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate Primary file : E:\Telework\2024-066\Processing\hydro\2024-066-0089.samavghdr Secondary file: E:\Telework\2024-066\Processing\hydro\2024-066-0089.mrgcln1s 15 secondary records matched to primary records. Comments from secondary file: E:\Telework\2024-066\Processing\hydro\2024-066-0089.mrgcln1s ------------------------------------------------------------ -DATCNV: 2025/12/10 10:48:01 Converted raw CTD cast (.hex) to .ros format. Output contained 2582 records with instrument channels. -CONVERT OXYGEN: 2025/12/10 10:48:02 Converted Oxygen data from Voltage to ml/L and umol/Kg Output contained 2582 records of Oxygen data -AV1: 2025/12/10 10:48:02 Averaged CTD data around each bottle position. Channel 'Number_of_bin_records' was added to file. Records reduced from 2582 to 15 (one row per bottle). -ADDSAMP: 2025/12/10 10:48:04 Merge Sample numbers assigned from Compiled Rosette Sheets into AV1 Niskin# column renamed to bottle position for consistency with AV1. 15 AV1 records successfully annotated with Sample_Number. -RENAME: 2025/12/10 10:48:04 Standardized and reordered channel names for CHE output. 16 Columns renamed and reordered successfully -MERGE: 2025/12/10 10:48:04 Merged Lab chemistry data into AV1 output. Merge key: Sample_Number Merge Scheme Used: Add Secondary to Matching Primary Primary Channels to Include: ALL Secondary Channels to Include: Station Salinity:Bottle Flag:Salinity:Bottle Station_CHL Chlorophyll:Extracted Flag:Chlorophyll:Extracted Phaeo-Pigment:Extracted Station_NUTS Depth_NUTS Nitrate_plus_Nitrite Flag:Nitrate_plus_Nitrite Silicate Flag:Silicate Phosphate Flag:Phosphate 15 secondary lab records matched to primary records. -HEADER EDITS: 2025/12/10 12:37:56 Channel 1: Bottle_Number [n/a] Name: Bottle ==> Bottle_Number Units: Number ==> n/a -CLEAN functions: 2025/12/10 12:38:36 20 Reset #RECS, MIN & MAX values in header. Remove Sea-Bird comments from the header. -SORT parameters: 2026/01/08 13:23:21 Sorted in ascending order of channel Sample_Number -CLEAN functions: 2026/01/08 14:14:19 20 Reset #RECS, MIN & MAX values in header. Change character data from " " to "0" in channels Flag:* Set event to last 4 characters of file name Remove Sea-Bird comments from the header. -CALIB parameters: 2026/01/08 14:14:55 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = E:\Telework\2024-066\Processing\doc\2024-066-rcalsil.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 31 Silicate umol/L 120 0.9040000E+00 0.3000000E-02 0.2500000E+02 Salinity:T1:C1 -CALIB parameters: 2026/01/08 14:16:48 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = E:\Telework\2024-066\Processing\doc\2024-066-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 18 Salinity:T0:C0 PSS-78 10 -0.4000000E-02 0.1000000E+01 20 Oxygen:Dissolved:SBE mL/L 10 0.7000000E-02 0.1032400E+01 -SORT parameters: 2026/01/14 14:04:50 Sorted in ascending order of channel Pressure -REMOVECH 2026/01/14 14:06:34 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Status:Pump Altimeter [metres] Salinity:T0:C0 [PSS-78] Flag -CHANGE units: Temperature reference channel: Temperature:Secondary [deg C (ITS90)] Salinity reference channel: Salinity:T1:C1 - No units changed -CHANGE units: Temperature reference channel: Temperature:Draw [deg C (ITS90)] Salinity reference channel: Salinity:T1:C1 - No units changed -HEADER EDITS: 2026/01/14 14:49:58 Applied edit header: E:\Telework\2024-066\Processing\doc\HYDRO\2024-066-bot-hdr.txt Channel 3: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 6: Transmissivity [%/metre] Name: Transmissivity:1 ==> Transmissivity Channel 7: Transmissivity:Green [%/metre] Name: Transmissivity:2 ==> Transmissivity:Green Channel 10: Salinity:T1:C1 [PSS-78] Format: F11.4 ==> F9.4 Channel 11: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 12: Conductivity:Secondary [S/m] Format: F11.6 ==> F10.5 Channel 13: Number_of_bin_records [n/a] Pad: ' ' ==> -99 Channel 15: Salinity:Bottle [PSS-78] Format: F9.3 ==> F9.4 Channel 19: Phaeo-Pigment:Extracted [mg/m^3] Units: n/a ==> mg/m^3 Channel 4: Depth [metres] Name: Depth:Salt_Water ==> Depth Format: F10.3 ==> F7.1 Channel 9: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:URU:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs $END *COMMENTS The Sampling Log for this cast had errors in sample numbers. 2 sample numbers were skipped in the log (414 and 416) but not on the sample labels. The labels are correct. The files were edited to ensure the analysis results are reported for the correct Niskin bottle. Comments originally reported by analysts were simplified as follows: Sample_Number 414: ALL: Listed on rosette sheet as 415. Sample_Number 415: ALL: Listed on rosette sheet as 417. Sample_Number 416: ALL: Listed on rosette sheet as 418. Sample_Number 417: ALL: Listed on rosette sheet as 419. Sample_Number 418: ALL: Listed on rosette sheet as 420 Sample_Number 419: ALL: Listed on rosette sheet as 421. Sample_Number 420: ALL: Listed on rosette sheet as 422. Sample_Number 421: ALL: Listed on rosette sheet as 423. Sample_Number 422: ALL: Listed on rosette sheet as 424. Sample_Number 423: ALL: Listed on rosette sheet as 425. Sample_Number 424: ALL: Listed on rosette sheet as 426. Comments from secondary file: C:/Users/BEDARDJ/Desktop/Data_Processing/bottle_data/2024-066/lab_data/2024-066_CHL.csv ------------------------------------------------------- Sample_Number 421: CHL: large (~20mL) spill due to leaky filtration cup, estimated volume filtered = 275mL; samples appear mislabelled - likely sample #423 on rosette sheet. ---------------------------------------------------------------------------------------------------- Analysis methods: ----------------- Chlorophyll samples were filtered onto 25mm GF/F filters after collection, and immediately frozen and stored in a -80C freezer until analysis. All samples were returned to the Institute of Ocean Sciences and analyzed 3-4 months after collection on a Turner Trilogy7200-000 fluorometer, using methods described in Holm-Hansen et al. (1965). Fluorescence readings taken before and after sample acidification were used to calculate chlorophyll and phaeopigment concentrations. For further details including a precisions analysis, see document QF2024-066_CHL*.xlsx. NOTE: Flags and comments apply to chlorophyll values only. No flags or comments are assigned for Phaeo-Pigment values. Oxygen samples were analyzed at sea using an automated Winkler titration system (Metrohm Dosimat model 876, a UV light source and detector with a 365nm filter controlled by LV02_876 software designed and constructed by Scripps Institution of Oceanography) with modifications based on Carpenter (1965) and adhering to WOCE protocols (Culberson 1991). For details including a precision analysis, see document QF2024-066_OXY*.xlsx. Salinity samples were collected in 200mL or 250mL type ll glass bottles with disposable nylon inserts and screw caps supplied by Ocean Scientific International Limited. They were analyzed in a temperature-controlled lab on a Guildline 8400B Salinometer standardized with IAPSO standard seawater 30-40 days after collection. For details see document QF2024-066_SAL*.xlsx. Nutrient samples were collected in plastic tubes and quick frozen in aluminum blocks stored in a -20C freezer. For samples 400m and deeper a second set of samples are collected and stored cool for silicate analysis. All samples were returned to the Institute of Ocean Sciences and they were analyzed using an Astoria-Pacific Analyzer following methods described in IOS Nutrient Methods (1996) Barwell-Clarke and Whitney. For details including a duplicate analysis, see document QF2024-066nuts*.xlsx. References: 1. Barwell-Clarke, J. and Whitney, F. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. 2. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 3. Culberson, C.H. 1991. Dissolved oxygen. WOCE Hydrographic Programme Operations and Methods (July 1991). 15pp. 4. Holm-Hansen, O., Lorenzen, C.J., Holmes, R.W., and Strickland J.D.H. 1965. Fluorometric Determination of Chlorophyll. J.du Cons. Intl. Pour l’Epl. De la Mer. 30:3-15. * For PDF versions of these papers see folder \\Cruise_Data\DOCUMENTS\Analysis Reference Papers ---------------------------------------------------------------------------------------------------- CTD Data Processing Notes: -------------------------- Conductivity, Fluorescence and Transmissivity data are nominal and unedited except that some records were removed in editing temperature and salinity. For details on the processing see the report: 2024-066_Processing_Report.doc. ---------------------------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- -------- ---- ------ ------------ Silicate umol/L 120 -99 (Salinity:T1:C1) (0.904 0.3E-02 25) Salinity:T0:C0 PSS-78 10 -99 () (-0.4E-02 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (0.7E-02 1.0324) $END !1- 2- --3--- --4--- ---5---- --6-- --7-- ---8--- ---9--- ---10--- --11-- ----12--- -13- -14- ---15--- 16 --17-- 18 --19-- --20-- 21 --22-- 23 ---24-- 25 !Bo Bo Pressu Depth Temperat Trans Trans Fluores Fluores Salinity Oxygen Conductiv Numb Samp Salinity Fl Chloro Fl Phaeo- Nitrat Fl Silica Fl Phospha Fl !tt tt re ure: missi missi cence: cence: :T1:C1 : ity: er_o le_ :Bottle ag phyll: ag Pigmen e_ ag te ag te ag !~u ~u Secondar vity vity: URU: URU: Dissol Secondary ~bin Numb ~o Extrac ~a t: plus_ ~t ~i ~p !mb en y Green Seapoin Wetlabs ved: _rec er tt ted ct Extrac Nitrit ri ca ha !er ce t SBE ords le ed ted e te te te !-- -- ------ ------ -------- ----- ----- ------- ------- -------- ------ --------- ---- ---- -------- -- ------ -- ------ ------ -- ------ -- ------- -- *END OF HEADER 15 15 1.8 1.8 10.5579 42.3 61.1 0.470 0.818 24.0681 5.09 2.75380 241 424 -99.0000 0 -99.00 0 -99.00 -99.00 0 -99.00 0 -99.000 0 14 14 1.8 1.8 10.6053 42.7 62.0 0.496 0.758 24.3014 5.16 2.78131 31 423 -99.0000 0 -99.00 0 -99.00 -99.00 0 -99.00 0 -99.000 0 13 13 1.8 1.8 10.5504 42.8 62.1 0.546 0.715 24.0409 5.20 2.75045 31 422 -99.0000 0 -99.00 0 -99.00 -99.00 0 -99.00 0 -99.000 0 12 12 4.9 4.9 10.8382 46.6 69.9 0.295 0.454 26.7619 4.63 3.05330 241 421 23.4420 2 -99.00 0 -99.00 -99.00 0 -99.00 0 -99.000 0 11 11 10.0 9.9 10.9944 49.0 76.6 0.233 0.333 28.8139 4.33 3.27710 241 420 -99.0000 0 0.41 26 0.16 15.20 2 32.91 2 1.225 2 10 10 25.0 24.7 11.0272 51.2 84.5 0.166 0.175 30.7422 3.71 3.47777 241 419 -99.0000 0 0.13 4 0.11 14.63 2 29.41 2 1.222 2 8 8 50.0 49.5 9.5759 51.1 88.3 0.148 0.088 31.7180 2.76 3.45166 45 417 -99.0000 0 -99.00 0 -99.00 19.48 26 37.28 26 1.682 26 9 9 50.0 49.5 9.5703 51.1 88.4 0.147 0.107 31.7217 2.76 3.45154 241 418 -99.0000 0 0.04 2 0.08 17.57 2 34.52 2 1.481 2 7 7 75.0 74.3 7.5769 51.0 89.4 0.135 0.070 32.7287 0.91 3.37520 241 416 31.9000 2 -99.00 0 -99.00 -99.00 0 -99.00 0 -99.000 0 6 6 100.1 99.2 7.2327 50.4 88.5 0.134 0.073 32.9862 0.72 3.36994 241 415 -99.0000 0 -99.00 0 -99.00 25.58 2 47.44 2 2.262 2 5 5 150.1 148.8 7.1758 50.4 88.1 0.134 0.066 33.0406 0.97 3.37213 241 414 -99.0000 0 -99.00 0 -99.00 31.91 2 81.49 2 3.090 2 4 4 200.0 198.2 7.1772 50.3 88.6 0.134 0.063 33.0463 1.02 3.37495 241 413 -99.0000 0 -99.00 0 -99.00 31.93 2 78.27 2 2.947 2 2 2 401.4 397.5 7.1946 48.0 82.7 0.134 0.052 33.0558 1.07 3.38605 35 411 33.0540 0 -99.00 0 -99.00 -99.00 0 -99.00 0 -99.000 0 3 3 401.4 397.5 7.1946 47.7 82.8 0.139 0.057 33.0558 1.07 3.38604 241 412 -99.0000 0 -99.00 0 -99.00 31.32 2 78.44 2 2.963 2 1 1 401.4 397.5 7.1946 47.5 82.8 0.134 0.050 33.0558 1.07 3.38605 30 410 -99.0000 0 -99.00 0 -99.00 -99.00 0 -99.00 0 -99.000 0