*2025/08/07 16:20:22.85 *IOS HEADER VERSION 2.0 2016/04/28 2016/06/13 IVF16 *FILE START TIME : UTC 2024/07/01 08:42:44.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 16 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : 8766A5BC NUMBER OF CHANNELS : 27 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- ---------------------------- --------------- -------------- -------------- 1 Bottle_Number n/a 1 16 2 Bottle:Firing_Sequence n/a 1 16 3 Pressure decibar 1.22 318.59 4 Depth metres 1.206 315.629 5 Temperature:Primary 'deg C (ITS90)' 9.0236 18.0526 6 Transmissivity %/metre 45.5 61.2 7 Fluorescence:URU:Seapoint mg/m^3 0.154 2.177 8 PAR uE/m^2/sec 0 7.702 9 PAR:Reference uE/m^2/sec 0 0 10 pH:SBE:Nominal n/a 8.462 9.186 11 Salinity:T0:C0 PSS-78 23.4646 31.041 12 Oxygen:Dissolved:SBE mL/L 3.165 6.876 13 Oxygen:Dissolved:SBE umol/kg 138 301.5 14 Conductivity:Primary S/m 3.207332 3.407092 15 Number_of_bin_records n/a 241 241 16 Sample_Number n/a 198 213 17 Salinity:Bottle PSS-78 31.022 31.022 18 Flag:Salinity:Bottle n/a 19 Chlorophyll:Extracted mg/m^3 0.61 2.2 20 Flag:Chlorophyll:Extracted n/a 21 Phaeo-Pigment:Extracted mg/m^3 0.28 1.1 22 Nitrate_plus_Nitrite umol/L 0.1E-01 29.1 23 Flag:Nitrate_plus_Nitrite n/a 24 Silicate umol/L 15.57 65.15 25 Flag:Silicate n/a 26 Phosphate umol/L 0.121 2.62 27 Flag:Phosphate n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 3 I I 0 2 -99 ' ' 3 I I 0 3 -99 ' ' 7 F ' ' 1 4 -99 ' ' 7 F ' ' 1 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 6 F ' ' 1 7 -99 ' ' 8 F ' ' 3 8 -99 ' ' 7 F ' ' 1 9 -99 ' ' 7 F ' ' 1 10 -99 ' ' 8 F ' ' 3 11 -99 ' ' 9 F ' ' 4 12 -99 ' ' 7 F ' ' 2 13 -99 ' ' 6 F ' ' 1 14 -99 ' ' 10 F ' ' 5 15 -99 ' ' 5 I I 0 16 -99 ' ' 5 I I 0 17 -99 ' ' 9 F R4 4 18 0 ' ' 3 NQ C ' ' 19 -99 ' ' 7 F R4 2 20 0 ' ' 3 NQ C ' ' 21 -99 ' ' 7 F R4 2 22 -99 ' ' 7 F R4 2 23 0 ' ' 3 NQ C ' ' 24 -99 ' ' 7 F R4 2 25 0 ' ' 3 NQ C ' ' 26 -99 ' ' 8 F R4 3 27 0 ' ' 3 NQ C ' ' $END $REMARKS Quality flags have the following significance: ---------------------------------------------------------------------------------- 0 = Acceptable measurement with no header comment 1 = Sample for this measurement was collected but not analyzed. Sample lost. 2 = Acceptable measurement with header comment 3 = Questionable measurement (Probably Good) 4 = Poor measurement (Probably Bad) 5 = Measurement not reported (Bad) 6 = Mean of replicate measurements 7 = Manual chromatographic peak measurement 8 = Irregular digital chromatographic peak integration 9 = Sample was planned for this measurement from this bottle but was not collected ---------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2024-007 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : Salish Sea Biophysical Survey SCIENTIST : Du Preez C. PLATFORM : Vector *LOCATION GEOGRAPHIC AREA : Strait of Georgia / Juan de Fuca Strait STATION : 3 EVENT NUMBER : 63 LATITUDE : 49 26.59000 N ! (deg min) LONGITUDE : 124 20.18000 W ! (deg min) WATER DEPTH : 324 ALTIMETER (M) : 4.91 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------------- -------------- ---------- Temperature ' ' 2449 Conductivity ' ' 1764 'Pressure:Digiquartz with TC' ' ' 0585 Temperature:2 ' ' 4484 Conductivity:2 ' ' 2128 'Oxygen:SBE 43' ' ' 1176 Fluorometer:Seapoint ' ' 3950 Altimeter ' ' 73171 pH ' ' 0691 PAR/Irradiance:Biospherical/Licor ' ' 4565 'Transmissometer:WET Labs C-Star' ' ' 1201DR Unavailable ' ' ' ' SPAR:Biospherical/Licor ' ' 20518 $END $REMARKS Software Version Seasave V 7.26.7.121 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 4.3 2025/07/29 15:38:26 3856 3856 CLEAN 5.3 2025/07/29 15:38:40 3856 3856 ADDSAMP 3.6 2025/07/29 16:16:31 3856 3856 BINAVE 4.2.1 2025/07/29 16:17:07 3856 16 MERGE 3.6 2025/07/31 09:16:05 16 16 CLEAN 5.3 2025/07/31 09:16:10 16 16 CALIB 12.1 2025/07/31 16:12:25 16 16 CALIB 12.1 2025/08/07 15:15:21 16 16 SORT 3.6 2025/08/07 16:16:29 16 16 REMOVECH 8.2 2025/08/07 16:16:58 16 16 CHGUNITS 3.2 2025/08/07 16:17:57 16 16 CHGUNITS 3.2 2025/08/07 16:18:02 16 16 REORDER 1.3.1 2025/08/07 16:18:35 ? ? HDREDIT2 3.2 2025/08/07 16:20:22 ? ? $END $REMARKS -CLEAN functions: 2025/07/29 15:38:34 20 Reset #RECS, MIN & MAX values in header. Interpolation by Channel 1: Scan_Number [n/a] in Pressure Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: E:\Telework\2024-007\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2025/07/31 09:16:05 Merge Channel: Bottle_Number Merge Scheme Used: 4: Add Secondary to Matching Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Bottle:Position, Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Phaeo-Pigment:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Temperature:Draw, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Dimethyl_Sulphide, Flag:Dimethyl_Sulphide, Dimethylsulfoniopropionate_Dissolved, Flag:Dimethylsulfoniopropionate_Dissolved, Dimethylsulfoniopropionate_Total, Flag:Dimethylsulfoniopropionate_Total, Ammonium, Flag:Ammonium Primary file : E:\Telework\2024-007\Processing\hydro\2024-007-0063.samavg Secondary file: E:\Telework\2024-007\Processing\hydro\2024-007-0063.mrgcln1s 16 secondary records matched to primary records. Comments from secondary file: E:\Telework\2024-007\Processing\hydro\2024-007-0063.mrgcln1s ------------------------------------------------------------ -SORT parameters: 2025/07/30 13:57:50 Sorted in ascending order of channel Bottle_Number -CLEAN functions: 2025/07/31 09:16:09 20 Reset #RECS, MIN & MAX values in header. Change character data from " " to "0" in channels Flag:* Set event to last 4 characters of file name Remove Sea-Bird comments from the header. -CALIB parameters: 2025/07/31 16:12:25 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = E:\Telework\2024-007\Processing\doc\2024-007-recal-SIL.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 32 Silicate umol/L 120 0.9040000E+00 0.3000000E-02 0.2500000E+02 Salinity:T0:C0 -CALIB parameters: 2025/08/07 15:15:21 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = E:\Telework\2024-007\Processing\doc\2024-007-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 4 Pressure decibar 10 -0.2000000E+00 0.1000000E+01 5 Depth:Salt_Water metres 10 -0.2000000E+00 0.1000000E+01 19 Salinity:T0:C0 PSS-78 10 -0.2000000E-02 0.1000000E+01 20 Salinity:T1:C1 PSS-78 10 -0.3400000E-02 0.1000000E+01 21 Oxygen:Dissolved:SBE mL/L 10 0.0000000E+00 0.1055000E+01 -SORT parameters: 2025/08/07 16:16:29 Sorted in ascending order of channel Pressure -REMOVECH 2025/08/07 16:16:58 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Status:Pump Altimeter [metres] Salinity:T1:C1 [PSS-78] Flag -CHANGE units: Temperature reference channel: Temperature:Primary Salinity reference channel: Salinity:T0:C0 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg -CHANGE units: Temperature reference channel: Temperature:Draw Salinity reference channel: Salinity:T0:C0 - No units changed -HEADER EDITS: 2025/08/07 16:20:22 Applied edit header: E:\Telework\2024-007\Processing\doc\HYDRO\2024-007-bot-hdr.txt Channel 2: Bottle:Firing_Sequence [n/a] Name: Bottle_Number ==> Bottle:Firing_Sequence Channel 1: Bottle_Number [n/a] Name: Bottle:Position ==> Bottle_Number Channel 3: Pressure [decibar] Format: F11.2 ==> F7.1 Channel 6: Transmissivity [%/metre] Name: Transmissivity:1 ==> Transmissivity Channel 12: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 15: Number_of_bin_records [n/a] Pad: ' ' ==> -99 Channel 18: Flag:Salinity:Bottle [n/a] Units: ==> n/a Channel 19: Chlorophyll:Extracted [mg/m^3] Units: PSS-78 ==> mg/m^3 Channel 20: Flag:Chlorophyll:Extracted [n/a] Units: ==> n/a Channel 21: Phaeo-Pigment:Extracted [mg/m^3] Units: ==> mg/m^3 Channel 23: Flag:Nitrate_plus_Nitrite [n/a] Units: ==> n/a Channel 25: Flag:Silicate [n/a] Units: ==> n/a Channel 27: Flag:Phosphate [n/a] Units: ==> n/a Channel 8: PAR [uE/m^2/sec] Units: umol/m^2/sec ==> uE/m^2/sec Format: F11.3 ==> F7.1 Channel 9: PAR:Reference [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 10: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a Channel 14: Conductivity:Primary [S/m] Format: F11.6 ==> F10.5 Channel 4: Depth [metres] Name: Depth:Salt_Water ==> Depth Format: F10.3 ==> F7.1 $END *COMMENTS Comments from secondary file: E:\Telework\2024-007\Processing\hydro\2024-007-0063.mrgcln1s ------------------------------------------------------------ Comments from secondary file: E:\Telework\2024-007\Processing\hydro\2024-007-0063.nut ------------------------------------------------------- Sample_Number 209: NUTS: Values appear out of profile Analysis methods: ----------------- Chlorophyll samples were filtered onto 25mm GF/F filters after collection, and immediately frozen and stored in a -80C freezer until analysis. All samples were returned to the Institute of Ocean Sciences and analyzed less than 1 week after the cruise on a Turner Trilogy 7200-000 fluorometer, using methods described in Holm-Hansen et al (1965). Fluorescence readings taken before and after sample acidification were used to calculate chlorophyll and phaeopigment concentrations. For further details on methodology, see document QF2024-007_CHL*.xlsx Methodology sheet. NOTE: Flags and comments apply to chlorophyll values only. No flags or comments are assigned for Phaeo-Pigment values. Oxygen samples were analyzed at sea using an automated Winkler titration system (Metrohm Dosimat model 876, a UV light source and detector with a 365nm filter controlled by LV02_876 software designed and constructed by Scripps Institution of Oceanography) with modifications based on Carpenter (1965) and adhering to WOCE protocols (Culberson 1991). For details including a precision analysis, see document QF2024-007_OXY*.xlsx. Salinity samples were collected in 200mL or 250mL type ll glass bottles with disposable nylon inserts and screw caps supplied by Ocean Scientific International Limited. They were analyzed in a temperature-controlled lab on a Guildline 8400B Salinometer standardized with IAPSO standard seawater 6-10 days after collection. For details see document QF2024-007_SAL*.xlsx. Nutrient samples were collected in plastic tubes and quick frozen in aluminum blocks stored in a -20C freezer. For samples 400m and deeper a second set of samples are collected and stored cool for silicate analysis. All samples were returned to the Institute of Ocean Sciences and they were analyzed using an Astoria-Pacific Analyzer following methods described in IOS Nutrient Methods (1996) Barwell-Clarke and Whitney. For details including a duplicate analysis, see document QF2024-007nuts*.xlsx. References: 1. Barwell-Clarke, J. and Whitney, F. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. 2. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 3. Culberson, C.H. 1991. Dissolved oxygen. WOCE Hydrographic Programme Operations and Methods (July 1991). 15pp. 4. Holm-Hansen, O., Lorenzen, C.J., Holmes, R.W., and Strickland J.D.H. 1965. Fluorometric Determination of Chlorophyll. J.du Cons. Intl. Pour l’Epl. De la Mer. 30:3-15. * For PDF versions of these papers see folder \\Cruise_Data\DOCUMENTS\Analysis Reference Papers ---------------------------------------------------------------------------------------------------- CTD Data Processing Notes: -------------------------- Conductivity, Fluorescence and Transmissivity data are nominal and unedited except that some records were removed in editing temperature and salinity. For details on the processing see the report: 2024-007_Processing_Report.doc. ---------------------------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- --------- ---- ------ ------------ Silicate umol/L 120 -99 (Salinity:T0:C0) (0.904 0.3E-02 25) Pressure decibar 10 -99 () (-0.2 1) Depth:Salt_Water metres 10 -99 () (-0.2 1) Salinity:T0:C0 PSS-78 10 -99 () (-0.2E-02 1) Salinity:T1:C1 PSS-78 10 -99 () (-0.34E-02 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (0 1.055) $END !1- 2- --3--- --4--- ---5---- --6-- ---7--- --8--- --9--- ---10-- ---11--- --12-- --13- ----14--- -15- -16- ---17--- 18 --19-- 20 --21-- --22-- 23 --24-- 25 ---26-- 27 !Bo Bo Pressu Depth Temperat Trans Fluores PAR PAR: pH:SBE: Salinity Oxygen Oxyge Conductiv Numb Samp Salinity Fl Chloro Fl Phaeo- Nitrat Fl Silica Fl Phospha Fl !tt tt re ure: missi cence: Refere Nominal :T0:C0 : n: ity: er_o le_ :Bottle ag phyll: ag Pigmen e_ ag te ag te ag !~u ~u Primary vity URU: nce Dissol Disso Primary ~bin Numb ~o Extrac ~a t: plus_ ~t ~i ~p !mb en Seapoin ved: lved: _rec er tt ted ct Extrac Nitrit ri ca ha !er ce t SBE SBE ords le ed ted e te te te !-- -- ------ ------ -------- ----- ------- ------ ------ ------- -------- ------ ----- --------- ---- ---- -------- -- ------ -- ------ ------ -- ------ -- ------- -- *END OF HEADER 16 16 1.2 1.2 18.0526 51.5 0.698 7.7 0.0 9.186 23.4646 6.36 279.4 3.20733 241 213 -99.0000 0 0.61 6 0.28 0.01 0 15.57 0 0.121 0 15 15 4.9 4.9 16.2052 45.5 1.766 1.8 0.0 9.154 25.7150 6.88 301.5 3.34368 241 212 -99.0000 0 1.59 0 0.89 0.97 0 19.48 0 0.381 0 14 14 10.0 9.9 13.6820 47.1 2.177 0.3 0.0 8.981 28.0024 6.11 267.4 3.40709 241 211 -99.0000 0 2.20 0 1.10 7.96 0 28.45 0 1.021 0 13 13 19.7 19.6 12.1124 54.5 1.306 0.0 0.0 8.814 29.1718 5.32 232.5 3.40587 241 210 -99.0000 0 1.13 0 0.77 16.83 0 39.73 0 1.645 0 12 12 30.0 29.7 10.3963 60.8 0.369 0.0 0.0 8.577 29.7097 4.05 177.0 3.32061 241 209 -99.0000 0 -99.00 0 -99.00 24.85 4 49.96 4 2.172 4 11 11 39.9 39.6 10.0695 60.9 0.255 0.0 0.0 8.532 29.8570 3.87 169.0 3.30888 241 208 -99.0000 0 -99.00 0 -99.00 11.41 0 25.28 0 1.372 0 10 10 49.8 49.4 9.7285 61.2 0.186 0.0 0.0 8.496 29.9650 3.77 164.7 3.29190 241 207 -99.0000 0 -99.00 0 -99.00 28.28 0 54.63 0 2.512 0 9 9 74.7 74.0 9.0236 60.9 0.161 0.0 0.0 8.490 30.2462 3.89 169.8 3.26233 241 206 -99.0000 0 -99.00 0 -99.00 29.10 6 53.29 6 2.482 6 8 8 100.0 99.1 9.1463 58.9 0.155 0.0 0.0 8.519 30.4892 3.82 166.5 3.29724 241 205 -99.0000 0 -99.00 0 -99.00 28.06 0 50.91 0 2.327 0 7 7 125.0 123.9 9.2377 57.4 0.156 0.0 0.0 8.536 30.6247 3.78 165.0 3.31913 241 204 -99.0000 0 -99.00 0 -99.00 27.57 0 50.69 0 2.331 0 6 6 149.9 148.5 9.2742 57.5 0.155 0.0 0.0 8.526 30.7323 3.67 159.9 3.33374 241 203 -99.0000 0 -99.00 0 -99.00 27.65 0 53.35 0 2.402 0 5 5 174.8 173.3 9.3368 57.4 0.154 0.0 0.0 8.530 30.8193 3.62 157.9 3.34855 241 202 -99.0000 0 -99.00 0 -99.00 27.20 0 54.68 0 2.375 0 4 4 200.0 198.2 9.3963 57.7 0.155 0.0 0.0 8.501 30.8809 3.43 149.5 3.36064 241 201 -99.0000 0 -99.00 0 -99.00 27.98 0 59.56 0 2.526 0 3 3 249.7 247.4 9.4373 56.4 0.155 0.0 0.0 8.464 30.9871 3.19 139.0 3.37658 241 200 -99.0000 0 -99.00 0 -99.00 28.34 0 62.59 0 2.620 0 2 2 299.8 297.0 9.4114 54.9 0.155 0.0 0.0 8.469 31.0222 3.23 140.7 3.37989 241 199 31.0220 6 -99.00 0 -99.00 28.06 0 62.62 0 2.597 0 1 1 318.6 315.6 9.4239 51.5 0.159 0.0 0.0 8.462 31.0410 3.17 138.0 3.38357 241 198 -99.0000 0 -99.00 0 -99.00 28.20 0 65.15 0 2.592 0