*2024/10/23 15:22:13.69 *IOS HEADER VERSION 2.0 2016/04/28 2016/06/13 IVF16 *FILE START TIME : UTC 2024/01/30 13:45:16.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 24 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : 204778CA NUMBER OF CHANNELS : 26 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Bottle_Number n/a 1 24 2 Bottle:Firing_Sequence n/a 1 24 3 Pressure decibar 5.007 4317.521 4 Depth metres 4.964 4237.503 5 Temperature:Secondary 'deg C (ITS90)' 1.5065 6.8278 6 Transmissivity %/metre 56.8 60.9 7 Transmissivity:Green %/metre 86.7 94.5 8 Fluorescence:URU:Seapoint mg/m^3 0.37E-01 0.833 9 Salinity:T1:C1 PSS-78 32.3436 34.6831 10 Oxygen:Dissolved:SBE mL/L 0.329 6.816 11 Oxygen:Dissolved:SBE umol/kg 14.3 296.9 12 Conductivity:Secondary S/m 3.12807 3.275027 13 Number_of_bin_records n/a 241 241 14 Sample_Number n/a 211 234 15 Temperature:Draw 'deg C (ITS90)' 3.3 6.8 16 Salinity:Bottle PSS-78 34.3531 34.68 17 Flag:Salinity:Bottle n/a 18 Oxygen:Dissolved mL/L 0.333 6.855 19 Oxygen:Dissolved umol/kg 14.47606 298.5745 20 Flag:Oxygen:Dissolved n/a 21 Nitrate_plus_Nitrite umol/L 11.88 45.87 22 Flag:Nitrate_plus_Nitrite n/a 23 Silicate umol/L 15.37 177.21 24 Flag:Silicate n/a 25 Phosphate umol/L 1.172 3.308 26 Flag:Phosphate n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 3 I I 0 2 -99 ' ' 3 I I 0 3 -99 ' ' 7 F ' ' 1 4 -99 ' ' 7 F ' ' 1 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 6 F ' ' 1 7 -99 ' ' 6 F ' ' 1 8 -99 ' ' 8 F ' ' 3 9 -99 ' ' 9 F ' ' 4 10 -99 ' ' 7 F ' ' 2 11 -99 ' ' 6 F ' ' 1 12 -99 ' ' 10 F ' ' 5 13 -99 ' ' 5 I I 0 14 -99 ' ' 5 I I 0 15 -99 ' ' 6 F R4 1 16 -99 ' ' 9 F R4 4 17 0 ' ' 3 NQ C ' ' 18 -99 ' ' 8 F R4 3 19 -99 ' ' 6 F ' ' 1 20 n/a ' ' 3 NQ C ' ' 21 -99 ' ' 7 F R4 2 22 0 ' ' 3 NQ C ' ' 23 -99 ' ' 7 F R4 2 24 0 ' ' 3 NQ C ' ' 25 -99 ' ' 8 F R4 3 26 0 ' ' 3 NQ C ' ' $END $REMARKS Quality flags have the following significance: ---------------------------------------------------------------------------------- 0 = Acceptable measurement with no header comment 1 = Sample for this measurement was collected but not analyzed. Sample lost. 2 = Acceptable measurement with header comment 3 = Questionable measurement (Probably Good) 4 = Poor measurement (Probably Bad) 5 = Measurement not reported (Bad) 6 = Mean of replicate measurements 7 = Manual chromatographic peak measurement 8 = Irregular digital chromatographic peak integration 9 = Sample was planned for this measurement from this bottle but was not collected ---------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2024-002 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : Line P SCIENTIST : Robert M. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : North-East Pacific & Strait of Georgia STATION : P26 EVENT NUMBER : 50 LATITUDE : 50 0.02000 N ! (deg min) LONGITUDE : 145 0.07000 W ! (deg min) WATER DEPTH : 4249 ALTIMETER (M) : 9.84 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0506 LOCATION : Mid-ship ! custom item $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------------- -------------- ---------- Temperature ' ' 2374 Conductivity ' ' 3184 'Pressure:Digiquartz with TC' ' ' 0506 Temperature:2 ' ' 4883 Conductivity:2 ' ' 4395 'Oxygen:SBE 43' ' ' 0997 Fluorometer:Seapoint ' ' 3949 'Fluorometer:WET Labs ECO-AFL/FL' ' ' FLRTD-2215 Altimeter ' ' 79487 PAR/Irradiance:Biospherical/Licor ' ' 70613 'Transmissometer:WET Labs C-Star' ' ' 1185DR 'Transmissometer:WET Labs C-Star:2' ' ' 1883DG $END $REMARKS Software Version Seasave V 7.26.7.121 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 4.3 2024/08/15 09:11:31 5784 5784 CLEAN 5.3 2024/08/15 09:11:49 5784 5784 ADDSAMP 3.6 2024/08/15 10:26:54 5784 5784 BINAVE 4.2.1 2024/08/23 15:30:49 5784 24 MERGE 3.6 2024/08/23 15:31:30 24 24 CLEAN 5.3 2024/08/30 12:52:06 24 24 CALIB 12.1 2024/08/30 12:52:11 24 24 CALIB 12.1 2024/08/30 12:58:30 24 24 SORT 3.6 2024/08/30 16:04:21 24 24 REMOVECH 8.2 2024/08/30 16:11:15 24 24 CHGUNITS 3.2 2024/08/30 16:11:30 24 24 CHGUNITS 3.2 2024/08/30 16:11:53 24 24 REORDER 1.3.1 2024/10/02 10:38:13 ? ? HDREDIT2 3.2 2024/10/02 10:41:55 ? ? HDREDIT2 3.2 2024/10/23 15:22:13 ? ? $END $REMARKS -CLEAN functions: 2024/08/15 09:11:44 20 Reset #RECS, MIN & MAX values in header. Interpolation by Channel 1: Scan_Number [n/a] in Pressure Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: E:\Telework\2024-002\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2024/08/23 15:31:30 Merge Channel: Bottle_Number Merge Scheme Used: 4: Add Secondary to Matching Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Bottle:Position, Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Phaeo-Pigment:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Temperature:Draw, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Dimethyl_Sulphide, Flag:Dimethyl_Sulphide, Dimethylsulfoniopropionate_Dissolved, Flag:Dimethylsulfoniopropionate_Dissolved, Dimethylsulfoniopropionate_Total, Flag:Dimethylsulfoniopropionate_Total, Ammonium, Flag:Ammonium Primary file : E:\Telework\2024-002\Processing\hydro\2024-002-0050.samavg Secondary file: E:\Telework\2024-002\Processing\hydro\2024-002-0050.mrgcln1s 24 secondary records matched to primary records. Comments from secondary file: E:\Telework\2024-002\Processing\hydro\2024-002-0050.mrgcln1s ------------------------------------------------------------ -CLEAN functions: 2024/08/15 12:58:56 20 Reduce header to sections: FIL HIS COM Remarks removed from kept sections. Reset #RECS, MIN & MAX values in header. -SORT parameters: 2024/08/15 12:59:00 Sorted in ascending order of channel Bottle_Number -CLEAN functions: 2024/08/30 12:52:01 20 Reset #RECS, MIN & MAX values in header. Change character data from " " to "0" in channels Flag:* Remove Sea-Bird comments from the header. -CALIB parameters: 2024/08/30 12:52:11 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = E:\Telework\2024-002\Processing\doc\2024-002-recal-SIL.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 32 Silicate umol/L 120 0.9040000E+00 0.3000000E-02 0.2500000E+02 Salinity:T1:C1 -CALIB parameters: 2024/08/30 12:58:30 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = E:\Telework\2024-002\Processing\doc\2024-002-rcal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 21 Oxygen:Dissolved:SBE mL/L 10 0.3200000E-01 0.1023200E+01 -SORT parameters: 2024/08/30 16:04:21 Sorted in ascending order of channel Pressure -REMOVECH 2024/08/30 16:11:15 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Fluorescence:URU:Wetlabs:ECO-AFL [mg/m^3] Oxygen:Voltage:SBE [volts] PAR [umol/m^2/sec] Descent_Rate [m/s] Status:Pump Altimeter [metres] Salinity:T0:C0 [PSS-78] Flag -CHANGE units: Temperature reference channel: Temperature:Secondary Salinity reference channel: Salinity:T1:C1 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg -CHANGE units: Temperature reference channel: Temperature:Draw Salinity reference channel: Salinity:T1:C1 'Oxygen:Dissolved' changed from mL/L to umol/kg -HEADER EDITS: 2024/10/02 10:41:55 Applied edit header: E:\Telework\2024-002\Processing\doc\HYDRO\2024-002-bot-hdr506.txt Channel 2: Bottle:Firing_Sequence [n/a] Name: Bottle_Number ==> Bottle:Firing_Sequence Channel 1: Bottle_Number [n/a] Name: Bottle:Position ==> Bottle_Number Channel 3: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 6: Transmissivity [%/metre] Name: Transmissivity:1 ==> Transmissivity Channel 7: Transmissivity:Green [%/metre] Name: Transmissivity:2 ==> Transmissivity:Green Channel 9: Salinity:T1:C1 [PSS-78] Format: F11.4 ==> F9.4 Channel 10: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 12: Conductivity:Secondary [S/m] Format: F11.6 ==> F10.5 Channel 13: Number_of_bin_records [n/a] Pad: ' ' ==> -99 Channel 15: Temperature:Draw [deg C (ITS90)] Format: F7.2 ==> F6.1 Channel 17: Flag:Salinity:Bottle [n/a] Units: ==> n/a Channel 20: Flag:Oxygen:Dissolved [n/a] Units: ==> n/a Pad: 0 ==> n/a Channel 22: Flag:Nitrate_plus_Nitrite [n/a] Units: ==> n/a Channel 24: Flag:Silicate [n/a] Units: ==> n/a Channel 26: Flag:Phosphate [n/a] Units: ==> n/a Channel 4: Depth [metres] Name: Depth:Salt_Water ==> Depth Format: F10.3 ==> F7.1 -HEADER EDITS: 2024/10/23 15:22:13 $END *COMMENTS Comments from secondary file: E:\Telework\2024-002\Processing\hydro\2024-002-0050.mrgcln1s ------------------------------------------------------------ Comments from secondary file: E:\Telework\2024-002\Processing\hydro\2024-002-0050.oxy ------------------------------------------------------- Sample_Number 215: OXY: may have lost a bit of percipitate during sampling. Sample_Number 228: OXY-2: may have lost a bit of percipitate during sampling, but duplicates compare very well (difference <0.001mL/L). Analysis methods: ----------------- Chlorophyll samples were filtered onto 25mm GF/F filters and immediately frozen and stored in a -80C freezer until analysis. All samples were returned to the Institute of Ocean Sciences and analyzed 3-6 weeks after the cruise on a Turner Trilogy 7200-000 fluorometer, using methods described in Holm-Hansen et al (1965). Fluorescence readings taken before and after sample acidification were used to calculate chlorophyll and phaeopigment concentrations. For details see worksheet “CV%” in file QF2024-002_CHL*.xlsx. NOTE: Flags and comments apply to chlorophyll values only. No flags or comments are assigned for Phaeo-Pigment values. Oxygen samples were analyzed at sea using an automated Winkler titration System (Metrohm Dosimat model 876 and a UV light source and detector with a 365nm filter controlled by LV02_876 software designed and constructed by Scripps Institution of Oceanography) with modifications based on Carpenter (1965) and adhering to WOCE protocols (Culberson 1991). For details including a precision analysis, see document QF2024-002_OXY*.xls. Salinity samples were collected in 200 mL type ll glass bottles with disposable nylon inserts and screw caps supplied by Ocean Scientific International Limited. They were analyzed in a temperature-controlled lab on a Guildline 8400B Salinometer standardized with IAPSO standard seawater 11 - 25 days after collection. For details including a duplicate analysis, see document QF2024-002_SAL*.xlsx. Nutrient samples were collected in plastic tubes and quick frozen in aluminum blocks stored in a -20C freezer. For samples 400m and deeper a second set of samples are collected and stored cool for silicate analysis. All samples were returned to the Institute of Ocean Sciences and they were analyzed using an Astoria-Pacific Analyzer following methods described in IOS Nutrient Methods (1996) Barwell-Clarke and Whitney. For details including a duplicate analysis, see document QF2024-002nuts*.xlsx. The minimum detectable level for DMS is 0.1 nM, so “0” values should be interpreted as <0.1 nM. DMS data are limited to 2 significant figures. Unless otherwise indicated the % relative difference between duplicates is <20%. All samples were run on an 8890 Gas Chromatograph system. For more details on analysis see documents "DMS summary (2024-002).xls". The minimum detectable level for DMSP is 0.1 nM, so “0” values should be interpreted as <0.1 nM. DMSP data are limited to 2 significant figures. Unless otherwise indicated the % relative difference between duplicates is <20%. For more details including method, raw data and duplicates, see document "QF2023-088_DMSP.xls”. A report on DMS and DMSP is in document 2024-002 DMS report.doc. References: 1. Barwell-Clarke, J. and Whitney, F. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. 2. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 3. Culberson, C.H. 1991. Dissolved oxygen. WOCE Hydrographic Programme Operations and Methods (July 1991). 15pp. 4. Holm-Hansen, O., Lorenzen, C.J., Holmes, R.W., and Strickland J.D.H. 1965. Fluorometric Determination of Chlorophyll. J.du Cons. Intl. Pour l’Epl. De la Mer. 30:3-15. * For PDF versions of these papers see folder \\Cruise_Data\DOCUMENTS\Analysis Reference Papers --------------------------------------------------------------------------------- CTD Data Processing Notes: -------------------------- Conductivity, Transmissivity, Fluorescence and PAR data are nominal and unedited except that some records were removed in editing temperature and salinity. NOTE: While the SBE fluorescence data are expressed in concentration units, they do not always compare well to extracted chlorophyll samples, particularly for casts far from shore. It is recommended that users check extracted chlorophyll values where available. There were 2 WetLabs CStar transmissometers in use during this cruise: Channel Transmissometer refers to sensor #1185DR (650nm - red) Channel Transmissometer:Green refers to sensor #1883DG (530nm - green) For comparison with other Institute of Ocean Sciences cruises, note that the transmissometer wavelength is 650nm unless otherwise stated. Two different CTDs were used during this cruise. For details on the processing see the report: 2024-002_Processing_Report.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- -------- ---- ------ ------------ Silicate umol/L 120 -99 (Salinity:T1:C1) (0.904 0.3E-02 25) Oxygen:Dissolved:SBE mL/L 10 -99 () (0.32E-01 1.0232) $END !1- 2- --3--- --4--- ---5---- --6-- --7-- ---8--- ---9---- --10-- --11- ----12--- -13- -14- --15- ---16--- 17 ---18-- --19- 20 --21-- 22 --23-- 24 ---25-- 26 !Bo Bo Pressu Depth Temperat Trans Trans Fluores Salinity Oxygen Oxyge Conductiv Numb Samp Tempe Salinity Fl Oxygen: Oxyge Fl Nitrat Fl Silica Fl Phospha Fl !tt tt re ure: missi missi cence: :T1:C1 : n: ity: er_o le_ ratur :Bottle ag Dissolv n: ag e_ ag te ag te ag !~u ~u Secondar vity vity: URU: Dissol Disso Secondary ~bin Numb e: ~o ed Disso ~o plus_ ~t ~i ~p !mb en y Green Seapoin ved: lved: _rec er Draw tt lved lv Nitrit ri ca ha !er ce t SBE SBE ords le ed e te te te !-- -- ------ ------ -------- ----- ----- ------- -------- ------ ----- --------- ---- ---- ----- -------- -- ------- ----- -- ------ -- ------ -- ------- -- *END OF HEADER 24 24 5.0 5.0 6.8021 56.8 86.8 0.833 32.3436 6.82 296.9 3.26949 241 234 6.8 -99.0000 0 6.855 298.6 0 11.88 0 15.37 0 1.172 0 23 23 10.7 10.6 6.8232 56.8 86.8 0.828 32.3475 6.81 296.7 3.27191 241 233 6.8 -99.0000 0 6.792 295.8 0 11.90 0 15.38 0 1.182 0 22 22 27.2 26.9 6.8270 56.8 86.7 0.811 32.3471 6.81 296.7 3.27291 241 232 6.8 -99.0000 0 6.790 295.7 0 11.89 0 15.38 0 1.182 0 21 21 49.7 49.2 6.8253 56.8 86.7 0.811 32.3469 6.81 296.6 3.27373 241 231 6.8 -99.0000 0 6.792 295.8 0 11.90 0 15.37 0 1.179 0 20 20 74.9 74.2 6.8278 56.8 86.7 0.796 32.3468 6.80 296.4 3.27503 241 230 6.8 -99.0000 0 6.786 295.6 0 11.88 0 15.37 0 1.195 0 19 19 100.7 99.8 6.2680 59.3 91.2 0.206 32.8560 6.29 273.6 3.27391 241 229 6.5 -99.0000 0 6.372 277.4 0 16.53 0 21.39 0 1.432 0 18 18 125.2 124.1 5.2783 60.1 92.8 0.085 33.3947 5.68 247.3 3.23667 241 228 6.0 -99.0000 0 5.669 246.7 26 24.08 0 34.75 0 1.836 0 17 17 151.2 149.8 5.1798 60.1 92.8 0.073 33.5951 5.12 222.7 3.24669 241 227 5.9 -99.0000 0 5.118 222.7 0 25.92 0 40.33 0 1.947 0 16 16 175.8 174.2 5.2779 60.1 92.7 0.065 33.7019 4.41 192.0 3.26573 241 226 6.0 -99.0000 0 4.442 193.3 0 27.80 0 45.96 0 2.075 0 15 15 200.2 198.4 4.9943 60.2 92.9 0.061 33.7447 3.60 156.5 3.24563 241 225 5.9 -99.0000 0 3.644 158.5 0 31.31 0 55.23 0 2.313 0 14 14 250.9 248.6 4.5981 60.5 93.3 0.052 33.7858 2.69 117.2 3.21671 241 224 5.7 -99.0000 0 2.700 117.5 6 35.67 0 66.91 0 2.616 0 13 13 301.1 298.3 4.3686 60.5 93.4 0.049 33.8696 1.73 75.2 3.20602 241 223 5.5 -99.0000 0 1.731 75.3 0 39.91 0 79.76 0 2.881 0 12 12 400.1 396.3 4.1487 60.6 93.6 0.046 34.0027 1.09 47.5 3.20249 241 222 5.4 -99.0000 0 1.097 47.7 0 42.53 6 94.94 6 3.026 6 11 11 601.5 595.5 3.7764 60.7 93.7 0.042 34.1585 0.68 29.6 3.19190 241 221 5.0 -99.0000 0 0.672 29.2 0 43.84 0 115.98 0 3.172 0 10 10 800.4 792.0 3.4000 60.6 93.6 0.038 34.2727 0.47 20.6 3.17717 241 220 4.7 -99.0000 0 0.490 21.3 0 44.66 0 131.58 0 3.237 0 9 9 1001.1 990.1 3.0438 60.6 93.6 0.038 34.3531 0.40 17.4 3.16136 241 219 4.3 34.3531 0 0.393 17.1 6 45.22 6 144.80 6 3.240 6 8 8 1251.7 1237.2 2.7013 60.6 93.7 0.037 34.4344 0.33 14.3 3.14881 241 218 4.0 34.4349 0 0.333 14.5 0 45.87 0 157.36 0 3.308 0 7 7 1501.0 1482.8 2.3994 60.7 93.6 0.037 34.4954 0.44 19.1 3.13794 241 217 3.8 34.4953 0 0.434 18.9 0 45.73 0 167.53 0 3.273 0 6 6 2001.4 1974.8 1.9749 60.7 93.9 0.037 34.5767 1.19 51.5 3.12807 241 216 3.5 34.5772 0 1.185 51.5 0 43.72 0 175.74 0 3.107 0 5 5 2500.9 2464.8 1.7331 60.8 94.2 0.037 34.6245 1.86 80.8 3.13066 241 215 3.4 34.6242 6 1.880 81.7 3 41.88 0 177.21 0 2.975 0 4 4 3002.4 2955.6 1.5827 60.8 94.3 0.037 34.6541 2.47 107.4 3.13909 241 214 3.4 34.6543 0 2.491 108.3 6 40.08 0 175.41 0 2.833 0 3 3 3501.1 3442.6 1.5152 60.9 94.5 0.037 34.6709 2.87 124.9 3.15286 241 213 3.3 34.6700 0 2.902 126.1 0 39.00 0 173.91 0 2.746 0 2 2 4001.4 3930.1 1.5065 60.8 94.4 0.037 34.6796 3.10 134.7 3.17044 241 212 3.5 34.6800 0 3.140 136.5 0 38.34 0 172.86 0 2.691 0 1 1 4317.5 4237.5 1.5220 60.1 93.1 0.037 34.6831 3.15 137.1 3.18285 241 211 4.1 -99.0000 0 3.193 138.8 0 38.15 0 176.26 0 2.677 0