*2024/11/01 16:56:54.37 *IOS HEADER VERSION 2.0 2016/04/28 2016/06/13 IVF16 *FILE START TIME : UTC 2024/03/08 15:52:50.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 17 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : 2F8B1951 NUMBER OF CHANNELS : 26 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- ---------------------------- --------------- -------------- -------------- 1 Bottle_Number n/a 1 17 2 Bottle:Firing_Sequence n/a 1 17 3 Pressure decibar 1.275 328.982 4 Depth metres 1.264 325.873 5 Temperature:Primary 'deg C (ITS90)' 5.4191 7.8504 6 Transmissivity %/metre 34 51 7 Transmissivity:Green %/metre 45.6 78.5 8 Fluorescence:URU:Seapoint mg/m^3 0.12E-01 1.143 9 Fluorescence:URU:Wetlabs mg/m^3 0.48E-01 1.556 10 Salinity:T0:C0 PSS-78 27.9364 31.3621 11 Oxygen:Dissolved:SBE mL/L 3.322 6.812 12 Oxygen:Dissolved:SBE umol/kg 144.8 297.7 13 Conductivity:Primary S/m 2.759735 3.281514 14 Number_of_bin_records n/a 37 241 15 Sample_Number n/a 20 36 16 Salinity:Bottle PSS-78 27.9687 31.3585 17 Flag:Salinity:Bottle n/a 18 Chlorophyll:Extracted mg/m^3 0.69 1.11 19 Flag:Chlorophyll:Extracted n/a 20 Phaeo-Pigment:Extracted mg/m^3 0.35 0.49 21 Nitrate_plus_Nitrite umol/L 25.55 30.85 22 Flag:Nitrate_plus_Nitrite n/a 23 Silicate umol/L 52.66 55.89 24 Flag:Silicate n/a 25 Phosphate umol/L 2.063 2.514 26 Flag:Phosphate n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 3 I I 0 2 -99 ' ' 3 I I 0 3 -99 ' ' 7 F ' ' 1 4 -99 ' ' 7 F ' ' 1 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 6 F ' ' 1 7 -99 ' ' 6 F ' ' 1 8 -99 ' ' 8 F ' ' 3 9 -99 ' ' 8 F ' ' 3 10 -99 ' ' 9 F ' ' 4 11 -99 ' ' 7 F ' ' 2 12 -99 ' ' 6 F ' ' 1 13 -99 ' ' 10 F ' ' 5 14 -99 ' ' 5 I I 0 15 -99 ' ' 5 I I 0 16 -99 ' ' 9 F R4 4 17 0 ' ' 3 NQ C ' ' 18 -99 ' ' 7 F R4 2 19 0 ' ' 3 NQ C ' ' 20 -99 ' ' 7 F R4 2 21 -99 ' ' 7 F R4 2 22 0 ' ' 3 NQ C ' ' 23 -99 ' ' 7 F R4 2 24 0 ' ' 3 NQ C ' ' 25 -99 ' ' 8 F R4 3 26 0 ' ' 3 NQ C ' ' $END $REMARKS Quality flags have the following significance: ---------------------------------------------------------------------------------- 0 = Acceptable measurement with no header comment 1 = Sample for this measurement was collected but not analyzed. Sample lost. 2 = Acceptable measurement with header comment 3 = Questionable measurement (Probably Good) 4 = Poor measurement (Probably Bad) 5 = Measurement not reported (Bad) 6 = Mean of replicate measurements 7 = Manual chromatographic peak measurement 8 = Irregular digital chromatographic peak integration 9 = Sample was planned for this measurement from this bottle but was not collected ---------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2024-032 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : Strait of Georgia Ecosystem Survey SCIENTIST : Johannessen S. PLATFORM : Vector *LOCATION GEOGRAPHIC AREA : B.C. Inlets STATION : KN10 EVENT NUMBER : 7 LATITUDE : 50 58.61000 N ! (deg min) LONGITUDE : 125 33.48000 W ! (deg min) WATER DEPTH : 332 ALTIMETER (M) : 5.2 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 1222 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------------- -------------- ---------- Temperature ' ' 2710 Conductivity ' ' 3394 'Pressure:Digiquartz with TC' ' ' 1222 Temperature:2 ' ' 2668 Conductivity:2 ' ' 3321 'Oxygen:SBE 43' ' ' 4367 Fluorometer:Seapoint ' ' 4186 'Fluorometer:WET Labs ECO-AFL/FL' ' ' FLRTD-2216 Altimeter ' ' 76341 'Transmissometer:WET Labs C-Star' ' ' 1201DR 'Transmissometer:WET Labs C-Star:2' ' ' 1883DG $END $REMARKS Software Version Seasave V 7.26.7.121 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 4.3 2024/10/01 09:29:44 3127 3127 CLEAN 5.3 2024/10/01 09:45:34 3127 3127 ADDSAMP 3.6 2024/10/01 10:11:32 3127 3127 BINAVE 4.2.1 2024/10/01 10:11:47 3127 17 MERGE 3.6 2024/10/01 10:54:39 17 17 CLEAN 5.3 2024/10/01 11:00:35 17 17 CALIB 12.1 2024/10/30 11:15:58 17 17 CALIB 12.1 2024/10/30 12:01:20 17 17 SORT 3.6 2024/11/01 16:10:20 17 17 REMOVECH 8.2 2024/11/01 16:12:39 17 17 CHGUNITS 3.2 2024/11/01 16:13:24 17 17 CHGUNITS 3.2 2024/11/01 16:13:47 17 17 REORDER 1.3.1 2024/11/01 16:14:29 ? ? HDREDIT2 3.2 2024/11/01 16:56:54 ? ? $END $REMARKS -CLEAN functions: 2024/10/01 09:45:33 20 Reset #RECS, MIN & MAX values in header. Interpolation by Channel 1: Scan_Number [n/a] in Pressure Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: E:\Telework\2024-001\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2024/10/01 10:54:39 Merge Channel: Bottle_Number Merge Scheme Used: 4: Add Secondary to Matching Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Bottle:Position, Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Phaeo-Pigment:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Temperature:Draw, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Dimethyl_Sulphide, Flag:Dimethyl_Sulphide, Dimethylsulfoniopropionate_Dissolved, Flag:Dimethylsulfoniopropionate_Dissolved, Dimethylsulfoniopropionate_Total, Flag:Dimethylsulfoniopropionate_Total, Ammonium, Flag:Ammonium Primary file : E:\Telework\2024-001\Processing\hydro\2024-001-0007.samavg Secondary file: E:\Telework\2024-001\Processing\hydro\2024-001-0007.mrgcln1s 17 secondary records matched to primary records. Comments from secondary file: E:\Telework\2024-001\Processing\hydro\2024-001-0007.mrgcln1s ------------------------------------------------------------ -SORT parameters: 2024/10/01 10:54:06 Sorted in ascending order of channel Bottle_Number -CLEAN functions: 2024/10/01 11:00:30 20 Reset #RECS, MIN & MAX values in header. Change character data from " " to "0" in channels Flag:* Remove Sea-Bird comments from the header. -CALIB parameters: 2024/10/30 11:15:58 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = E:\Telework\2024-001\Processing\doc\2024-001-rcalsil.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 31 Silicate umol/L 120 0.9040000E+00 0.3000000E-02 0.2500000E+02 Salinity:T1:C1 -CALIB parameters: 2024/10/30 12:01:20 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = E:\Telework\2024-001\Processing\doc\2024-001-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 20 Oxygen:Dissolved:SBE mL/L 10 0.0000000E+00 0.1030000E+01 -SORT parameters: 2024/11/01 16:10:20 Sorted in ascending order of channel Pressure -REMOVECH 2024/11/01 16:12:39 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Status:Pump Altimeter [metres] Salinity:T1:C1 [PSS-78] Flag -CHANGE units: Temperature reference channel: Temperature:Primary Salinity reference channel: Salinity:T0:C0 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg -CHANGE units: Temperature reference channel: Temperature:Draw Salinity reference channel: Salinity:T0:C0 - No units changed -HEADER EDITS: 2024/11/01 16:56:54 Applied edit header: E:\Telework\2024-001\Processing\doc\HYDRO\2024-001-bot-hdr1222.txt Channel 2: Bottle:Firing_Sequence [n/a] Name: Bottle_Number ==> Bottle:Firing_Sequence Channel 1: Bottle_Number [n/a] Name: Bottle:Position ==> Bottle_Number Channel 3: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 6: Transmissivity [%/metre] Name: Transmissivity:1 ==> Transmissivity Channel 7: Transmissivity:Green [%/metre] Name: Transmissivity:2 ==> Transmissivity:Green Channel 11: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 14: Number_of_bin_records [n/a] Pad: ' ' ==> -99 Channel 17: Flag:Salinity:Bottle [n/a] Units: ==> n/a Channel 19: Flag:Chlorophyll:Extracted [n/a] Units: ==> n/a Channel 22: Flag:Nitrate_plus_Nitrite [n/a] Units: ==> n/a Channel 24: Flag:Silicate [n/a] Units: ==> n/a Channel 26: Flag:Phosphate [n/a] Units: ==> n/a Channel 13: Conductivity:Primary [S/m] Format: F11.6 ==> F10.5 Channel 4: Depth [metres] Name: Depth:Salt_Water ==> Depth Format: F10.3 ==> F7.1 Channel 9: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:URU:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs $END *COMMENTS Analysis methods: ----------------- Chlorophyll samples were filtered onto 25mm GF/F filters after collection, and immediately frozen and stored in a -80C freezer until analysis. All samples were returned to the Institute of Ocean Sciences and analyzed 3-5 weeks after the collection on a Turner Trilogy 7200-000 fluorometer, using methods described in Holm-Hansen et al (1965). Fluorescence readings taken before and after sample acidification were used to calculate chlorophyll and phaeopigment concentrations. For further details on methodology, see document QF2024-001_CHL*.xlsx Methodology sheet. NOTE: Flags and comments apply to chlorophyll values only. No flags or comments are assigned for Phaeo-Pigment values. Oxygen samples were analyzed at IOS immediately following the cruise using an automated Winkler titration system (Metrohm Dosimat model 876, a UV light source and detector with a 365nm filter controlled by LV02_876 software designed and constructed by Scripps Institution of Oceanography) with modifications based on Carpenter (1965) and adhering to WOCE protocols (Culberson 1991). For details including a precision analysis, see document QF2023-001OXY*.xlsx. Salinity samples were collected in 200 mL type ll glass bottles with disposable nylon inserts and screw caps supplied by Ocean Scientific International Limited. They were analyzed in a temperature-controlled lab on a Guildline 8400B Salinometer standardized with IAPSO standard seawater 4 - 13 days after collection. For details see document QF2024-001SAL*.xlsx. Nutrient samples were collected in plastic tubes and quick frozen in aluminum blocks stored in a -20C freezer. For samples 400m and deeper a second set of samples are collected and stored cool for silicate analysis. All samples were returned to the Institute of Ocean Sciences and they were analyzed using an Astoria-Pacific Analyzer following methods described in IOS Nutrient Methods (1996) Barwell-Clarke and Whitney. For details including a duplicate analysis, see document QF2024-001nuts*.xlsx. References: 1. Barwell-Clarke, J. and Whitney, F. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. 2. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 3. Culberson, C.H. 1991. Dissolved oxygen. WOCE Hydrographic Programme Operations and Methods (July 1991). 15pp. 4. Holm-Hansen, O., Lorenzen, C.J., Holmes, R.W., and Strickland J.D.H. 1965. Fluorometric Determination of Chlorophyll. J.du Cons. Intl. Pour l’Epl. De la Mer. 30:3-15. * For PDF versions of these papers see folder \\Cruise_Data\DOCUMENTS\Analysis Reference Papers ---------------------------------------------------------------------------------------------------- CTD Data Processing Notes: -------------------------- Conductivity, Fluorescence and Transmissivity data are nominal and unedited except that some records were removed in editing temperature and salinity. There were 2 WetLabs CStar transmissometers in use during this cruise: Channel Transmissometer refers to sensor #1185DR (650nm - red) Channel Transmissometer:Green refers to sensor #1883DG (530nm - green) For comparison with other Institute of Ocean Sciences cruises, note that the transmissometer wavelength is 650nm unless otherwise stated. There was only 1 cast with calibration sampling for dissolved oxygen while sensor 4367 was in use; most of those samples came from areas where flushing of Niskin bottles is likely to be poor. Based on 3 samples from sections where vertical DO gradients were fairly low, DO values were estimated to be low by about 3%. Recalibration was applied based on that estimate. For details on the processing see the report: 2024-001_Processing_Report.doc. ---------------------------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- -------- ---- ------ ------------ Silicate umol/L 120 -99 (Salinity:T1:C1) (0.904 0.3E-02 25) Oxygen:Dissolved:SBE mL/L 10 -99 () (0 1.03) $END !1- 2- --3--- --4--- ---5---- --6-- --7-- ---8--- ---9--- ---10--- --11-- --12- ----13--- -14- -15- ---16--- 17 --18-- 19 --20-- --21-- 22 --23-- 24 ---25-- 26 !Bo Bo Pressu Depth Temperat Trans Trans Fluores Fluores Salinity Oxygen Oxyge Conductiv Numb Samp Salinity Fl Chloro Fl Phaeo- Nitrat Fl Silica Fl Phospha Fl !tt tt re ure: missi missi cence: cence: :T0:C0 : n: ity: er_o le_ :Bottle ag phyll: ag Pigmen e_ ag te ag te ag !~u ~u Primary vity vity: URU: URU: Dissol Disso Primary ~bin Numb ~o Extrac ~a t: plus_ ~t ~i ~p !mb en Green Seapoin Wetlabs ved: lved: _rec er tt ted ct Extrac Nitrit ri ca ha !er ce t SBE SBE ords le ed ted e te te te !-- -- ------ ------ -------- ----- ----- ------- ------- -------- ------ ----- --------- ---- ---- -------- -- ------ -- ------ ------ -- ------ -- ------- -- *END OF HEADER 15 15 1.3 1.3 5.4493 34.1 45.6 1.034 1.343 27.9865 6.80 297.3 2.76632 40 34 -99.0000 0 1.08 6 0.38 25.55 0 55.89 0 2.063 0 16 16 1.3 1.3 5.4191 34.1 45.6 1.049 1.358 27.9384 6.81 297.7 2.75974 50 35 27.9687 0 -99.00 0 -99.00 -99.00 0 -99.00 0 -99.000 0 17 17 1.3 1.3 5.4297 34.0 45.6 1.037 1.350 27.9364 6.81 297.6 2.76035 241 36 -99.0000 0 -99.00 0 -99.00 -99.00 0 -99.00 0 -99.000 0 14 14 4.9 4.9 6.1388 35.4 48.8 1.143 1.556 28.8500 6.41 279.9 2.89697 241 33 -99.0000 0 1.11 0 0.49 26.58 0 53.90 0 2.158 0 13 13 10.6 10.5 7.3837 43.8 64.0 0.814 1.324 29.8602 5.36 233.7 3.08876 241 32 -99.0000 0 0.69 0 0.35 28.07 0 54.01 0 2.292 0 12 12 24.9 24.7 7.5913 48.9 73.1 0.230 0.349 30.3200 4.95 216.0 3.14931 241 31 -99.0000 0 -99.00 0 -99.00 28.97 0 54.26 0 2.389 0 10 10 51.0 50.5 7.6519 49.4 74.5 0.091 0.148 30.4450 4.87 212.4 3.16710 37 29 30.4681 0 -99.00 0 -99.00 -99.00 0 -99.00 0 -99.000 0 11 11 51.0 50.5 7.6463 49.6 74.7 0.095 0.158 30.4431 4.86 212.1 3.16647 241 30 -99.0000 0 -99.00 0 -99.00 29.16 0 54.54 0 2.410 0 9 9 75.8 75.1 7.6835 46.2 68.9 0.049 0.102 30.5479 4.68 204.2 3.18040 241 28 -99.0000 0 -99.00 0 -99.00 29.44 0 54.39 0 2.429 0 8 8 101.1 100.2 7.7963 44.1 65.9 0.025 0.072 30.6478 4.08 177.9 3.20018 241 27 -99.0000 0 -99.00 0 -99.00 30.08 6 52.66 6 2.450 6 7 7 150.5 149.2 7.7583 43.0 63.8 0.022 0.053 30.9541 3.56 155.2 3.22793 241 26 -99.0000 0 -99.00 0 -99.00 30.85 0 53.26 0 2.498 0 6 6 200.5 198.6 7.7164 47.7 72.7 0.016 0.060 31.2034 3.34 145.5 3.24994 241 25 -99.0000 0 -99.00 0 -99.00 30.48 0 54.98 0 2.489 0 5 5 250.6 248.2 7.7858 50.0 77.2 0.014 0.052 31.2979 3.32 144.8 3.26677 241 24 -99.0000 0 -99.00 0 -99.00 29.76 0 54.71 0 2.481 0 4 4 300.0 297.2 7.8289 51.0 78.5 0.012 0.048 31.3396 3.43 149.7 3.27637 241 23 -99.0000 0 -99.00 0 -99.00 29.50 0 53.40 0 2.480 0 2 2 329.0 325.9 7.8502 38.9 56.2 0.012 0.053 31.3621 3.33 145.2 3.28149 54 21 31.3585 0 -99.00 0 -99.00 -99.00 0 -99.00 0 -99.000 0 3 3 329.0 325.9 7.8499 38.8 56.4 0.013 0.059 31.3618 3.34 145.4 3.28143 241 22 -99.0000 0 -99.00 0 -99.00 29.57 0 54.01 0 2.514 0 1 1 329.0 325.9 7.8504 38.9 56.8 0.012 0.063 31.3621 3.33 145.3 3.28151 54 20 -99.0000 0 -99.00 0 -99.00 -99.00 0 -99.00 0 -99.000 0