*2024/07/15 17:28:08.64 *IOS HEADER VERSION 2.0 2016/04/28 2016/06/13 IVF16 *FILE START TIME : UTC 2023/08/26 09:12:20.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 11 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : 52010C67 NUMBER OF CHANNELS : 13 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Bottle_Number n/a 1 11 2 Bottle:Firing_Sequence n/a 1 11 3 Pressure decibar 2.418 295.328 4 Depth metres 2.397 292.619 5 Temperature:Primary 'deg C (ITS90)' 6.6326 14.4738 6 Transmissivity %/metre 52.4 61.3 7 Fluorescence:URU:Seapoint mg/m^3 0.37E-01 0.962 8 Salinity:T0:C0 PSS-78 32.2899 33.9864 9 Oxygen:Dissolved:SBE mL/L 1.5 6.167 10 Oxygen:Dissolved:SBE umol/kg 65.24978 268.964 11 Conductivity:Primary S/m 3.416353 3.944938 12 Number_of_bin_records n/a 44 241 13 Sample_Number n/a 1 11 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 3 I I 0 2 -99 ' ' 3 I I 0 3 -99 ' ' 7 F ' ' 1 4 -99 ' ' 7 F ' ' 1 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 6 F ' ' 1 7 -99 ' ' 8 F ' ' 3 8 -99 ' ' 9 F ' ' 4 9 -99 ' ' 7 F ' ' 2 10 -99 ' ' 6 F ' ' 1 11 -99 ' ' 10 F ' ' 5 12 -99 ' ' 5 I I 0 13 -99 ' ' 5 I I 0 $END $REMARKS Quality flags have the following significance: ---------------------------------------------------------------------------------- 0 = Acceptable measurement with no header comment 1 = Sample for this measurement was collected but not analyzed. Sample lost. 2 = Acceptable measurement with header comment 3 = Questionable measurement (Probably Good) 4 = Poor measurement (Probably Bad) 5 = Measurement not reported (Bad) 6 = Mean of replicate measurements 7 = Manual chromatographic peak measurement 8 = Irregular digital chromatographic peak integration 9 = Sample was planned for this measurement from this bottle but was not collected ---------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2023-061 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : Hake Acoustic Trawl Survey SCIENTIST : Gauthier S. PLATFORM : Sir John Franklin *LOCATION GEOGRAPHIC AREA : WCVI STATION : x87-300 EVENT NUMBER : 45 LATITUDE : 48 46.74000 N ! (deg min) LONGITUDE : 126 25.37000 W ! (deg min) WATER DEPTH : 302 ALTIMETER (M) : 7.08 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 1453 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2023 Conductivity ' ' 3500 'Pressure:Digiquartz with TC' ' ' 1453 Temperature:2 ' ' 6565 Conductivity:2 ' ' 5043 'Oxygen:SBE 43' ' ' 3038 Fluorometer:Seapoint ' ' 3849 'Transmissometer:WET Labs C-Star' ' ' 983DR Altimeter ' ' 76341 $END $REMARKS Software Version Seasave V 7.26.7.121 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 4.3 2024/07/04 09:55:02 1540 1540 CLEAN 5.3 2024/07/04 09:57:17 1540 1540 ADDSAMP 3.6 2024/07/04 11:30:05 1540 1540 BINAVE 4.2.1 2024/07/04 11:31:43 1540 11 MERGE 3.6 2024/07/04 11:33:02 11 11 CLEAN 5.3 2024/07/08 08:10:31 11 11 CALIB 12.1 2024/07/15 14:48:02 11 11 SORT 3.6 2024/07/15 14:58:20 11 11 REMOVECH 8.2 2024/07/15 17:23:03 11 11 CHGUNITS 3.2 2024/07/15 17:26:00 11 11 REORDER 1.3.1 2024/07/15 17:26:24 ? ? HDREDIT2 3.2 2024/07/15 17:28:08 ? ? $END $REMARKS -CLEAN functions: 2024/07/04 09:57:06 20 Reset #RECS, MIN & MAX values in header. Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: E:\Telework\2023-061\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2024/07/04 11:33:02 Merge Channel: Bottle_Number Merge Scheme Used: 4: Add Secondary to Matching Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Sample_Number, Bottle:Position, Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Phaeo-Pigment:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Temperature:Draw, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Dimethyl_Sulphide_7890GC, Flag:Dimethyl_Sulphide_7890GC, Dimethyl_Sulphide_8890GC, Flag:Dimethyl_Sulphide_8890GC, Dimethylsulfoniopropionate_Dissolved, Flag:Dimethylsulfoniopropionate_Dissolved, Dimethylsulfoniopropionate_Total, Flag:Dimethylsulfoniopropionate_Total, Ammonium, Flag:Ammonium Primary file : E:\Telework\2023-061\Processing\hydro\2023-061-0045.samavg Secondary file: E:\Telework\2023-061\Processing\hydro\2023-061-0045.mrgcln1s 11 secondary records matched to primary records. Comments from secondary file: E:\Telework\2023-061\Processing\hydro\2023-061-0045.mrgcln1s ------------------------------------------------------------ -SORT parameters: 2024/07/04 11:32:51 Sorted in ascending order of channel Bottle_Number -CLEAN functions: 2024/07/08 08:10:29 20 Reset #RECS, MIN & MAX values in header. Remove Sea-Bird comments from the header. -CALIB parameters: 2024/07/15 14:48:02 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = E:\Telework\2023-061\Processing\doc\2023-061-rcal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 16 Salinity:T0:C0 PSS-78 10 0.2000000E-02 0.1000000E+01 18 Oxygen:Dissolved:SBE mL/L 10 0.0000000E+00 0.1060000E+01 -SORT parameters: 2024/07/15 14:58:20 Sorted in ascending order of channel Pressure -REMOVECH 2024/07/15 17:23:03 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Status:Pump Altimeter [metres] Salinity:T1:C1 [PSS-78] Flag -CHANGE units: Temperature reference channel: Temperature:Primary Salinity reference channel: Salinity:T0:C0 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg -HEADER EDITS: 2024/07/15 17:28:08 Applied edit header: E:\Telework\2023-061\Processing\doc\HYDRO\2023-061-bot-hdr.txt Channel 2: Bottle:Firing_Sequence [n/a] Name: Bottle_Number ==> Bottle:Firing_Sequence Channel 1: Bottle_Number [n/a] Name: Bottle:Position ==> Bottle_Number Channel 3: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 6: Transmissivity [%/metre] Name: Transmissivity:1 ==> Transmissivity Channel 9: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 12: Number_of_bin_records [n/a] Pad: ' ' ==> -99 Channel 11: Conductivity:Primary [S/m] Format: F11.6 ==> F10.5 Channel 4: Depth [metres] Name: Depth:Salt_Water ==> Depth Format: F10.3 ==> F7.1 $END *COMMENTS Analysis methods: ----------------- Salinity samples were collected opportunistically in very old sailnity bottles that were found onboard the Franklin. The bottles were sealed via phenolic caps with cone inserts and taped with electrical tape and laboratory tape. Despite the bottles fitting on the sample bottle platform on the Autosal, the wide opening meant that it was difficult to get a very good seal between the bung and opening so most samples leaked slightly as the pump pushed air into the head spaces. Samples were analyzed in a temperature-controlled lab on a Guildline 8400B Salinometer standardized with IAPSO standard seawater 29 days after collection. For details see document QF2023-061_SAL*.xlsx. References: 1. Barwell-Clarke, J. and Whitney, F. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. * For PDF versions of these papers see folder \\Cruise_Data\DOCUMENTS\Analysis Reference Papers --------------------------------------------------------------------------------- CTD Data Processing Notes: -------------------------- Conductivity, Transmissivity, Fluorescence and PAR data are nominal and unedited except that some records were removed in editing temperature and salinity. The PAR sensor was removed after event #17. NOTE: While the SBE fluorescence data are expressed in concentration units, they do not always compare well to extracted chlorophyll samples, particularly for casts far from shore. Salinity sampling was limited in quantity and quality and there was no dissolved oxygen sampling. Recalibration was applied based on previous cruises and one that followed and used the same sensors, as well as post-cruise factory calibrations. For details on the processing see the report: 2023-061_Processing_Report.doc. --------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (0.2E-02 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (0 1.06) $END !1- 2- --3--- --4--- ---5---- --6-- ---7--- ---8---- --9--- --10- ----11--- -12- -13- !Bo Bo Pressu Depth Temperat Trans Fluores Salinity Oxygen Oxyge Conductiv Numb Samp !tt tt re ure: missi cence: :T0:C0 : n: ity: er_o le_ !~u ~u Primary vity URU: Dissol Disso Primary ~bin Numb !mb en Seapoin ved: lved: _rec er !er ce t SBE SBE ords !-- -- ------ ------ -------- ----- ------- -------- ------ ----- --------- ---- ---- *END OF HEADER 11 11 2.4 2.4 14.4738 53.8 0.962 32.2923 6.15 268.4 3.94494 240 11 10 10 2.5 2.5 14.4707 54.0 0.942 32.2899 6.17 269.0 3.94440 47 10 9 9 50.3 49.8 8.4571 61.3 0.228 32.6384 5.49 239.3 3.44267 241 9 8 8 50.5 50.1 8.4558 61.3 0.227 32.6419 5.50 239.6 3.44289 86 8 6 6 149.7 148.3 7.5920 59.9 0.037 33.8851 2.28 99.1 3.48689 56 6 7 7 149.9 148.5 7.5924 60.0 0.038 33.8851 2.28 99.2 3.48695 241 7 4 4 200.1 198.3 7.1427 52.4 0.039 33.9407 1.65 71.7 3.45379 44 4 5 5 200.4 198.6 7.1419 52.4 0.040 33.9408 1.65 71.8 3.45374 241 5 1 1 295.2 292.4 6.6341 54.9 0.038 33.9861 1.50 65.3 3.41646 48 1 2 2 295.3 292.6 6.6326 55.2 0.040 33.9864 1.50 65.2 3.41636 55 2 3 3 295.3 292.6 6.6326 55.1 0.039 33.9862 1.50 65.4 3.41635 241 3