*2024/07/15 17:28:07.91 *IOS HEADER VERSION 2.0 2016/04/28 2016/06/13 IVF16 *FILE START TIME : UTC 2023/08/23 09:02:54.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 11 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : 48AF6158 NUMBER OF CHANNELS : 13 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Bottle_Number n/a 1 11 2 Bottle:Firing_Sequence n/a 1 11 3 Pressure decibar 2.566 305.357 4 Depth metres 2.544 302.568 5 Temperature:Primary 'deg C (ITS90)' 6.7334 14.967 6 Transmissivity %/metre 51.9 61.7 7 Fluorescence:URU:Seapoint mg/m^3 0.49E-01 0.955 8 Salinity:T0:C0 PSS-78 32.242 33.9801 9 Oxygen:Dissolved:SBE mL/L 1.56 6.218 10 Oxygen:Dissolved:SBE umol/kg 67.86106 271.2249 11 Conductivity:Primary S/m 3.421772 3.984506 12 Number_of_bin_records n/a 42 241 13 Sample_Number n/a 1 11 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 3 I I 0 2 -99 ' ' 3 I I 0 3 -99 ' ' 7 F ' ' 1 4 -99 ' ' 7 F ' ' 1 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 6 F ' ' 1 7 -99 ' ' 8 F ' ' 3 8 -99 ' ' 9 F ' ' 4 9 -99 ' ' 7 F ' ' 2 10 -99 ' ' 6 F ' ' 1 11 -99 ' ' 10 F ' ' 5 12 -99 ' ' 5 I I 0 13 -99 ' ' 5 I I 0 $END $REMARKS Quality flags have the following significance: ---------------------------------------------------------------------------------- 0 = Acceptable measurement with no header comment 1 = Sample for this measurement was collected but not analyzed. Sample lost. 2 = Acceptable measurement with header comment 3 = Questionable measurement (Probably Good) 4 = Poor measurement (Probably Bad) 5 = Measurement not reported (Bad) 6 = Mean of replicate measurements 7 = Manual chromatographic peak measurement 8 = Irregular digital chromatographic peak integration 9 = Sample was planned for this measurement from this bottle but was not collected ---------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2023-061 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : Hake Acoustic Trawl Survey SCIENTIST : Gauthier S. PLATFORM : Sir John Franklin *LOCATION GEOGRAPHIC AREA : WCVI STATION : x83-300 EVENT NUMBER : 25 LATITUDE : 48 6.76000 N ! (deg min) LONGITUDE : 125 44.57000 W ! (deg min) WATER DEPTH : 317 ALTIMETER (M) : 10.16 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 1453 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2023 Conductivity ' ' 3500 'Pressure:Digiquartz with TC' ' ' 1453 Temperature:2 ' ' 6565 Conductivity:2 ' ' 5043 'Oxygen:SBE 43' ' ' 3038 Fluorometer:Seapoint ' ' 3849 'Transmissometer:WET Labs C-Star' ' ' 983DR Altimeter ' ' 76341 $END $REMARKS Software Version Seasave V 7.26.7.121 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 4.3 2024/07/04 09:54:58 1583 1583 CLEAN 5.3 2024/07/04 09:57:14 1583 1583 ADDSAMP 3.6 2024/07/04 11:30:01 1583 1583 BINAVE 4.2.1 2024/07/04 11:31:41 1583 11 MERGE 3.6 2024/07/04 11:33:01 11 11 CLEAN 5.3 2024/07/08 08:10:30 11 11 CALIB 12.1 2024/07/15 14:48:01 11 11 SORT 3.6 2024/07/15 14:58:19 11 11 REMOVECH 8.2 2024/07/15 17:23:02 11 11 CHGUNITS 3.2 2024/07/15 17:26:00 11 11 REORDER 1.3.1 2024/07/15 17:26:23 ? ? HDREDIT2 3.2 2024/07/15 17:28:07 ? ? $END $REMARKS -CLEAN functions: 2024/07/04 09:57:06 20 Reset #RECS, MIN & MAX values in header. Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: E:\Telework\2023-061\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2024/07/04 11:33:01 Merge Channel: Bottle_Number Merge Scheme Used: 4: Add Secondary to Matching Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Sample_Number, Bottle:Position, Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Phaeo-Pigment:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Temperature:Draw, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Dimethyl_Sulphide_7890GC, Flag:Dimethyl_Sulphide_7890GC, Dimethyl_Sulphide_8890GC, Flag:Dimethyl_Sulphide_8890GC, Dimethylsulfoniopropionate_Dissolved, Flag:Dimethylsulfoniopropionate_Dissolved, Dimethylsulfoniopropionate_Total, Flag:Dimethylsulfoniopropionate_Total, Ammonium, Flag:Ammonium Primary file : E:\Telework\2023-061\Processing\hydro\2023-061-0025.samavg Secondary file: E:\Telework\2023-061\Processing\hydro\2023-061-0025.mrgcln1s 11 secondary records matched to primary records. Comments from secondary file: E:\Telework\2023-061\Processing\hydro\2023-061-0025.mrgcln1s ------------------------------------------------------------ -SORT parameters: 2024/07/04 11:32:51 Sorted in ascending order of channel Bottle_Number -CLEAN functions: 2024/07/08 08:10:29 20 Reset #RECS, MIN & MAX values in header. Remove Sea-Bird comments from the header. -CALIB parameters: 2024/07/15 14:48:01 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = E:\Telework\2023-061\Processing\doc\2023-061-rcal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 16 Salinity:T0:C0 PSS-78 10 0.2000000E-02 0.1000000E+01 18 Oxygen:Dissolved:SBE mL/L 10 0.0000000E+00 0.1060000E+01 -SORT parameters: 2024/07/15 14:58:19 Sorted in ascending order of channel Pressure -REMOVECH 2024/07/15 17:23:02 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Status:Pump Altimeter [metres] Salinity:T1:C1 [PSS-78] Flag -CHANGE units: Temperature reference channel: Temperature:Primary Salinity reference channel: Salinity:T0:C0 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg -HEADER EDITS: 2024/07/15 17:28:07 Applied edit header: E:\Telework\2023-061\Processing\doc\HYDRO\2023-061-bot-hdr.txt Channel 2: Bottle:Firing_Sequence [n/a] Name: Bottle_Number ==> Bottle:Firing_Sequence Channel 1: Bottle_Number [n/a] Name: Bottle:Position ==> Bottle_Number Channel 3: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 6: Transmissivity [%/metre] Name: Transmissivity:1 ==> Transmissivity Channel 9: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 12: Number_of_bin_records [n/a] Pad: ' ' ==> -99 Channel 11: Conductivity:Primary [S/m] Format: F11.6 ==> F10.5 Channel 4: Depth [metres] Name: Depth:Salt_Water ==> Depth Format: F10.3 ==> F7.1 $END *COMMENTS Analysis methods: ----------------- Salinity samples were collected opportunistically in very old sailnity bottles that were found onboard the Franklin. The bottles were sealed via phenolic caps with cone inserts and taped with electrical tape and laboratory tape. Despite the bottles fitting on the sample bottle platform on the Autosal, the wide opening meant that it was difficult to get a very good seal between the bung and opening so most samples leaked slightly as the pump pushed air into the head spaces. Samples were analyzed in a temperature-controlled lab on a Guildline 8400B Salinometer standardized with IAPSO standard seawater 29 days after collection. For details see document QF2023-061_SAL*.xlsx. References: 1. Barwell-Clarke, J. and Whitney, F. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. * For PDF versions of these papers see folder \\Cruise_Data\DOCUMENTS\Analysis Reference Papers --------------------------------------------------------------------------------- CTD Data Processing Notes: -------------------------- Conductivity, Transmissivity, Fluorescence and PAR data are nominal and unedited except that some records were removed in editing temperature and salinity. The PAR sensor was removed after event #17. NOTE: While the SBE fluorescence data are expressed in concentration units, they do not always compare well to extracted chlorophyll samples, particularly for casts far from shore. Salinity sampling was limited in quantity and quality and there was no dissolved oxygen sampling. Recalibration was applied based on previous cruises and one that followed and used the same sensors, as well as post-cruise factory calibrations. For details on the processing see the report: 2023-061_Processing_Report.doc. --------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (0.2E-02 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (0 1.06) $END !1- 2- --3--- --4--- ---5---- --6-- ---7--- ---8---- --9--- --10- ----11--- -12- -13- !Bo Bo Pressu Depth Temperat Trans Fluores Salinity Oxygen Oxyge Conductiv Numb Samp !tt tt re ure: missi cence: :T0:C0 : n: ity: er_o le_ !~u ~u Primary vity URU: Dissol Disso Primary ~bin Numb !mb en Seapoin ved: lved: _rec er !er ce t SBE SBE ords !-- -- ------ ------ -------- ----- ------- -------- ------ ----- --------- ---- ---- *END OF HEADER 11 11 2.6 2.5 14.9547 51.9 0.813 32.2434 6.22 271.2 3.98354 241 11 10 10 2.6 2.6 14.9670 52.0 0.779 32.2420 6.21 270.8 3.98451 74 10 8 8 50.0 49.6 8.3688 55.9 0.955 32.5000 5.89 256.5 3.42177 55 8 9 9 50.5 50.1 8.3664 55.7 0.878 32.5023 5.90 256.9 3.42180 241 9 7 7 149.3 148.0 7.6515 61.7 0.074 33.8818 2.63 114.4 3.49194 241 7 6 6 149.8 148.4 7.6512 61.6 0.086 33.8818 2.62 114.1 3.49194 67 6 5 5 200.3 198.5 7.1786 59.5 0.056 33.9405 1.69 73.3 3.45701 241 5 4 4 200.3 198.5 7.1796 59.5 0.049 33.9402 1.69 73.4 3.45708 42 4 2 2 305.0 302.2 6.7394 58.6 0.058 33.9796 1.56 67.9 3.42574 77 2 3 3 305.2 302.4 6.7547 58.7 0.053 33.9781 1.56 67.9 3.42699 241 3 1 1 305.4 302.6 6.7334 58.5 0.053 33.9801 1.56 67.9 3.42528 63 1