*2024/07/15 17:28:07.19 *IOS HEADER VERSION 2.0 2016/04/28 2016/06/13 IVF16 *FILE START TIME : UTC 2023/08/21 09:55:30.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 13 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : E49191EF NUMBER OF CHANNELS : 14 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Bottle_Number n/a 1 13 2 Bottle:Firing_Sequence n/a 1 13 3 Pressure decibar 3.483 387.342 4 Depth metres 3.454 383.739 5 Temperature:Primary 'deg C (ITS90)' 6.1609 12.2658 6 Transmissivity %/metre 50.4 59.5 7 Fluorescence:URU:Seapoint mg/m^3 0.41E-01 0.872 8 PAR uE/m^2/sec 0 1.261 9 Salinity:T0:C0 PSS-78 32.3328 34.0263 10 Oxygen:Dissolved:SBE mL/L 1.269 6.5 11 Oxygen:Dissolved:SBE umol/kg 55.19638 283.3565 12 Conductivity:Primary S/m 3.381805 3.749144 13 Number_of_bin_records n/a 60 241 14 Sample_Number n/a 1 13 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 3 I I 0 2 -99 ' ' 3 I I 0 3 -99 ' ' 7 F ' ' 1 4 -99 ' ' 7 F ' ' 1 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 6 F ' ' 1 7 -99 ' ' 8 F ' ' 3 8 -99 ' ' 7 F ' ' 1 9 -99 ' ' 9 F ' ' 4 10 -99 ' ' 7 F ' ' 2 11 -99 ' ' 6 F ' ' 1 12 -99 ' ' 10 F ' ' 5 13 -99 ' ' 5 I I 0 14 -99 ' ' 5 I I 0 $END $REMARKS Quality flags have the following significance: ---------------------------------------------------------------------------------- 0 = Acceptable measurement with no header comment 1 = Sample for this measurement was collected but not analyzed. Sample lost. 2 = Acceptable measurement with header comment 3 = Questionable measurement (Probably Good) 4 = Poor measurement (Probably Bad) 5 = Measurement not reported (Bad) 6 = Mean of replicate measurements 7 = Manual chromatographic peak measurement 8 = Irregular digital chromatographic peak integration 9 = Sample was planned for this measurement from this bottle but was not collected ---------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2023-061 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : Hake Acoustic Trawl Survey SCIENTIST : Gauthier S. PLATFORM : Sir John Franklin *LOCATION GEOGRAPHIC AREA : WCVI STATION : x81-300 EVENT NUMBER : 15 LATITUDE : 47 46.75000 N ! (deg min) LONGITUDE : 125 5.53000 W ! (deg min) WATER DEPTH : 396 ALTIMETER (M) : 9.5 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 1453 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------------- -------------- ---------- Temperature ' ' 2023 Conductivity ' ' 3500 'Pressure:Digiquartz with TC' ' ' 1453 Temperature:2 ' ' 6565 Conductivity:2 ' ' 5043 'Oxygen:SBE 43' ' ' 3038 Fluorometer:Seapoint ' ' 3849 PAR/Irradiance:Biospherical/Licor ' ' 4565 'Transmissometer:WET Labs C-Star' ' ' 983DR Altimeter ' ' 76341 $END $REMARKS Software Version Seasave V 7.26.7.121 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 4.3 2024/07/04 09:54:56 2026 2026 CLEAN 5.3 2024/07/04 09:57:13 2026 2026 ADDSAMP 3.6 2024/07/04 11:29:59 2026 2026 BINAVE 4.2.1 2024/07/04 11:31:41 2026 13 MERGE 3.6 2024/07/04 11:33:00 13 13 CLEAN 5.3 2024/07/08 08:10:30 13 13 CALIB 12.1 2024/07/15 14:48:00 13 13 SORT 3.6 2024/07/15 14:58:19 13 13 REMOVECH 8.2 2024/07/15 17:23:02 13 13 CHGUNITS 3.2 2024/07/15 17:25:59 13 13 REORDER 1.3.1 2024/07/15 17:26:22 ? ? HDREDIT2 3.2 2024/07/15 17:28:07 ? ? $END $REMARKS -CLEAN functions: 2024/07/04 09:57:06 20 Reset #RECS, MIN & MAX values in header. Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: E:\Telework\2023-061\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2024/07/04 11:33:00 Merge Channel: Bottle_Number Merge Scheme Used: 4: Add Secondary to Matching Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Sample_Number, Bottle:Position, Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Phaeo-Pigment:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Temperature:Draw, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Dimethyl_Sulphide_7890GC, Flag:Dimethyl_Sulphide_7890GC, Dimethyl_Sulphide_8890GC, Flag:Dimethyl_Sulphide_8890GC, Dimethylsulfoniopropionate_Dissolved, Flag:Dimethylsulfoniopropionate_Dissolved, Dimethylsulfoniopropionate_Total, Flag:Dimethylsulfoniopropionate_Total, Ammonium, Flag:Ammonium Primary file : E:\Telework\2023-061\Processing\hydro\2023-061-0015.samavg Secondary file: E:\Telework\2023-061\Processing\hydro\2023-061-0015.mrgcln1s 13 secondary records matched to primary records. Comments from secondary file: E:\Telework\2023-061\Processing\hydro\2023-061-0015.mrgcln1s ------------------------------------------------------------ -SORT parameters: 2024/07/04 11:32:51 Sorted in ascending order of channel Bottle_Number -CLEAN functions: 2024/07/08 08:10:29 20 Reset #RECS, MIN & MAX values in header. Remove Sea-Bird comments from the header. -CALIB parameters: 2024/07/15 14:48:00 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = E:\Telework\2023-061\Processing\doc\2023-061-rcal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 16 Salinity:T0:C0 PSS-78 10 0.2000000E-02 0.1000000E+01 18 Oxygen:Dissolved:SBE mL/L 10 0.0000000E+00 0.1060000E+01 -SORT parameters: 2024/07/15 14:58:19 Sorted in ascending order of channel Pressure -REMOVECH 2024/07/15 17:23:02 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Status:Pump Altimeter [metres] Salinity:T1:C1 [PSS-78] Flag -CHANGE units: Temperature reference channel: Temperature:Primary Salinity reference channel: Salinity:T0:C0 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg -HEADER EDITS: 2024/07/15 17:28:07 Applied edit header: E:\Telework\2023-061\Processing\doc\HYDRO\2023-061-bot-hdr.txt Channel 2: Bottle:Firing_Sequence [n/a] Name: Bottle_Number ==> Bottle:Firing_Sequence Channel 1: Bottle_Number [n/a] Name: Bottle:Position ==> Bottle_Number Channel 3: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 6: Transmissivity [%/metre] Name: Transmissivity:1 ==> Transmissivity Channel 10: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 13: Number_of_bin_records [n/a] Pad: ' ' ==> -99 Channel 8: PAR [uE/m^2/sec] Units: umol/m^2/sec ==> uE/m^2/sec Format: F11.3 ==> F7.1 Channel 12: Conductivity:Primary [S/m] Format: F11.6 ==> F10.5 Channel 4: Depth [metres] Name: Depth:Salt_Water ==> Depth Format: F10.3 ==> F7.1 $END *COMMENTS Analysis methods: ----------------- Salinity samples were collected opportunistically in very old sailnity bottles that were found onboard the Franklin. The bottles were sealed via phenolic caps with cone inserts and taped with electrical tape and laboratory tape. Despite the bottles fitting on the sample bottle platform on the Autosal, the wide opening meant that it was difficult to get a very good seal between the bung and opening so most samples leaked slightly as the pump pushed air into the head spaces. Samples were analyzed in a temperature-controlled lab on a Guildline 8400B Salinometer standardized with IAPSO standard seawater 29 days after collection. For details see document QF2023-061_SAL*.xlsx. References: 1. Barwell-Clarke, J. and Whitney, F. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. * For PDF versions of these papers see folder \\Cruise_Data\DOCUMENTS\Analysis Reference Papers --------------------------------------------------------------------------------- CTD Data Processing Notes: -------------------------- Conductivity, Transmissivity, Fluorescence and PAR data are nominal and unedited except that some records were removed in editing temperature and salinity. The PAR sensor was removed after event #17. NOTE: While the SBE fluorescence data are expressed in concentration units, they do not always compare well to extracted chlorophyll samples, particularly for casts far from shore. Salinity sampling was limited in quantity and quality and there was no dissolved oxygen sampling. Recalibration was applied based on previous cruises and one that followed and used the same sensors, as well as post-cruise factory calibrations. For details on the processing see the report: 2023-061_Processing_Report.doc. --------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (0.2E-02 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (0 1.06) $END !1- 2- --3--- --4--- ---5---- --6-- ---7--- --8--- ---9---- --10-- --11- ----12--- -13- -14- !Bo Bo Pressu Depth Temperat Trans Fluores PAR Salinity Oxygen Oxyge Conductiv Numb Samp !tt tt re ure: missi cence: :T0:C0 : n: ity: er_o le_ !~u ~u Primary vity URU: Dissol Disso Primary ~bin Numb !mb en Seapoin ved: lved: _rec er !er ce t SBE SBE ords !-- -- ------ ------ -------- ----- ------- ------ -------- ------ ----- --------- ---- ---- *END OF HEADER 12 12 3.5 3.5 12.2658 50.4 0.859 1.2 32.3329 6.49 283.0 3.74914 101 12 13 13 3.6 3.6 12.2656 50.4 0.872 1.3 32.3328 6.50 283.4 3.74911 241 13 11 11 50.7 50.2 8.5742 59.5 0.322 0.0 33.0142 4.04 176.0 3.48876 241 11 10 10 50.8 50.4 8.5913 59.5 0.307 0.0 33.0493 4.06 176.6 3.49363 66 10 9 9 149.0 147.7 7.4221 59.2 0.042 0.0 33.9104 1.86 80.8 3.47389 241 9 8 8 149.1 147.8 7.4217 59.2 0.041 0.0 33.9104 1.86 81.0 3.47387 88 8 6 6 202.0 200.2 7.2076 55.6 0.048 0.0 33.9358 1.61 70.2 3.45927 71 6 7 7 202.1 200.3 7.2075 55.7 0.048 0.0 33.9359 1.61 70.2 3.45927 241 7 5 5 303.1 300.4 6.7261 55.2 0.049 0.0 33.9792 1.42 61.8 3.42444 241 5 4 4 303.6 300.9 6.7264 55.2 0.047 0.0 33.9793 1.42 61.6 3.42450 60 4 2 2 387.1 383.5 6.1653 56.8 0.044 0.0 34.0257 1.27 55.2 3.38213 105 2 1 1 387.3 383.7 6.1609 56.9 0.044 0.0 34.0263 1.27 55.2 3.38180 89 1 3 3 387.3 383.7 6.1642 56.7 0.047 0.0 34.0258 1.27 55.4 3.38205 241 3