*2023/04/18 09:00:47.18 *IOS HEADER VERSION 2.0 2016/04/28 2016/06/13 IVF16 *FILE START TIME : UTC 2022/10/17 19:04:22.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 12 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : 84E78ED6 NUMBER OF CHANNELS : 19 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Bottle:Position n/a 1 12 2 Bottle_Number n/a 1 12 3 Pressure decibar 0.85 493.061 4 Depth metres 0.843 488.143 5 Temperature:Secondary 'deg C (ITS90)' 6.9177 11.7783 6 Transmissivity %/metre 31.6 56 7 Transmissivity:Green %/metre 49.3 86 8 Salinity:T1:C1 PSS-78 21.1121 33.2583 9 Oxygen:Dissolved:SBE mL/L 2.032 7.793 10 Oxygen:Dissolved:SBE umol/kg 88.4 342.6 11 Conductivity:Secondary S/m 2.518562 3.384563 12 Number_of_bin_records n/a 38 241 13 Sample_Number n/a 214 225 14 Nitrate_plus_Nitrite umol/L 0.5E-01 32.43 15 Flag:Nitrate_plus_Nitrite ' ' 16 Silicate umol/L 32.75 63.92 17 Flag:Silicate ' ' 18 Phosphate umol/L 0.53E-01 2.624 19 Flag:Phosphate ' ' $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 3 I I 0 2 -99 ' ' 3 I I 0 3 -99 ' ' 7 F ' ' 1 4 -99 ' ' 7 F ' ' 1 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 6 F ' ' 1 7 -99 ' ' 6 F ' ' 1 8 -99 ' ' 9 F ' ' 4 9 -99 ' ' 7 F ' ' 2 10 -99 ' ' 6 F ' ' 1 11 -99 ' ' 10 F ' ' 6 12 ' ' ' ' 5 I I 0 13 -99 ' ' 5 I I 0 14 -99 ' ' 7 F R4 2 15 0 ' ' 3 NQ C ' ' 16 -99 ' ' 7 F R4 2 17 0 ' ' 3 NQ C ' ' 18 -99 ' ' 8 F R4 3 19 0 ' ' 3 NQ C ' ' $END $REMARKS Quality flags have the following significance: ---------------------------------------------------------------------------------- 0 = Acceptable measurement with no header comment 1 = Sample for this measurement was collected but not analyzed. Sample lost. 2 = Acceptable measurement with header comment 3 = Questionable measurement (Probably Good) 4 = Poor measurement (Probably Bad) 5 = Measurement not reported (Bad) 6 = Mean of replicate measurements 7 = Manual chromatographic peak measurement 8 = Irregular digital chromatographic peak integration 9 = Sample was planned for this measurement from this bottle but was not collected ---------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2022-075 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : Inlets SCIENTIST : Johannessen S. PLATFORM : Sir John Franklin *LOCATION GEOGRAPHIC AREA : B.C. Inlets STATION : DE06 EVENT NUMBER : 47 LATITUDE : 52 29.28000 N ! (deg min) LONGITUDE : 127 14.62000 W ! (deg min) WATER DEPTH : 497 ALTIMETER (M) : 2.42 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------------- -------------- ---------- Temperature ' ' 2449 Conductivity ' ' 1764 'Pressure:Digiquartz with TC' ' ' 0585 Temperature:2 ' ' 4484 Conductivity:2 ' ' 2128 'Oxygen:SBE 43' ' ' 1176 Fluorometer:Seapoint ' ' 2225 Altimeter ' ' 75321 'Transmissometer:WET Labs C-Star' ' ' 1185DR 'Transmissometer:WET Labs C-Star:2' ' ' 1883DG $END $REMARKS Software Version Seasave V 7.26.7.121 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 4.3 2023/03/22 15:03:59 2492 2492 CLEAN 5.3 2023/03/22 15:04:15 2492 2492 ADDSAMP 3.6 2023/03/22 16:21:17 2492 2492 MERGEHDR 1.3 2023/03/23 11:59:04 2492 2492 BINAVE 4.2.1 2023/03/23 12:10:39 2492 12 MERGE 3.6 2023/03/23 12:10:50 12 12 CLEAN 5.3 2023/03/23 13:25:32 12 12 CALIB 12.1 2023/04/14 11:31:40 12 12 CALIB 12.1 2023/04/14 11:41:30 12 12 SORT 3.6 2023/04/14 13:48:37 12 12 CHGUNITS 3.2 2023/04/14 14:05:57 12 12 CHGUNITS 3.2 2023/04/14 14:06:00 12 12 REORDER 1.3.1 2023/04/14 14:06:48 ? ? REMOVECH 8.2 2023/04/14 14:07:39 12 12 HDREDIT2 3.2 2023/04/18 09:00:47 ? ? $END $REMARKS -CLEAN functions: 2023/03/22 15:04:09 20 Reset #RECS, MIN & MAX values in header. Interpolation by Channel 1: Scan_Number [n/a] in Pressure Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: D:\Telework\2022-075\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2023/03/23 12:10:50 Merge Channel: Bottle_Number Merge Scheme Used: 4: Add Secondary to Matching Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Sample_Number, Bottle:Position, Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Phaeo-Pigment:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Temperature:Draw, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate Primary file : D:\Telework\2022-075\Processing\hydro\2022-075-0047.samavg Secondary file: D:\Telework\2022-075\Processing\hydro\2022-075-0047.mrgcln1s 12 secondary records matched to primary records. Comments from secondary file: D:\Telework\2022-075\Processing\hydro\2022-075-0047.mrgcln1s ------------------------------------------------------------ -SORT parameters: 2023/03/23 10:44:01 Sorted in ascending order of channel Bottle_Number -CLEAN functions: 2023/03/23 13:25:31 20 Reset #RECS, MIN & MAX values in header. Change character data from " " to "0" in channels Flag:* Remove Sea-Bird comments from the header. -CALIB parameters: 2023/04/14 11:31:40 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = D:\Telework\2022-075\Processing\doc\2022-075-rcalsil.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 25 Silicate umol/L 120 0.9040000E+00 0.3000000E-02 0.2500000E+02 Salinity:T1:C1 -CALIB parameters: 2023/04/14 11:41:30 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = D:\Telework\2022-075\Processing\doc\2022-075-rcal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Salinity:T0:C0 PSS-78 10 0.8000000E-02 0.1000000E+01 15 Salinity:T1:C1 PSS-78 10 0.2000000E-02 0.1000000E+01 16 Oxygen:Dissolved:SBE mL/L 10 0.2550000E-01 0.1093900E+01 -SORT parameters: 2023/04/14 13:48:37 Sorted in ascending order of channel Pressure -CHANGE units: Temperature reference channel: Temperature:Secondary Salinity reference channel: Salinity:T1:C1 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg -CHANGE units: Temperature reference channel: Temperature:Draw Salinity reference channel: Salinity:T1:C1 - No units changed -REMOVECH 2023/04/14 14:07:39 The following CHANNEL(S) were removed: Temperature:Primary [deg C (ITS90)] Fluorescence:URU:Seapoint [mg/m^3] Salinity:T0:C0 [PSS-78] Conductivity:Primary [S/m] Scan_Number Oxygen:Voltage:SBE [volts] Status:Pump Descent_Rate [m/s] Altimeter [metres] Flag -HEADER EDITS: 2023/04/18 09:00:47 Applied edit header: D:\Telework\2022-075\hydro\2022-075-bot-hdr.txt Channel 4: Depth [metres] Name: Depth:Salt_Water ==> Depth Channel 6: Transmissivity [%/metre] Name: Transmissivity:1 ==> Transmissivity Format: F8.3 ==> F6.1 Channel 7: Transmissivity:Green [%/metre] Name: Transmissivity:2 ==> Transmissivity:Green $END *COMMENTS Comments from secondary file: D:\Telework\2022-075\Processing\hydro\2022-075-0047.mrgcln1s ------------------------------------------------------------ Comments from secondary file: D:\Telework\2022-075\Processing\hydro\2022-075-0047.nut ------------------------------------------------------- Sample_Number 215: SIL: Data from frozen, no cool sample collected Analysis methods: ----------------- Chlorophyll samples were filtered onto 25mm GF/F filters and immediately frozen and stored in a -80C freezer until analysis. All samples were returned to the Institute of Ocean Sciences and analyzed 2 weeks after the cruise on a Turner Trilogy 7200-000 fluorometer, using methods described in Holm-Hansen et al (1965). Fluorescence readings taken before and after sample acidification were used to calculate chlorophyll and phaeopigment concentrations. For details see worksheet “CV%” in file QF2022-075_CHL*.xlsx. NOTE: Flags and comments apply to chlorophyll values only. No flags or comments are assigned for Phaeo-Pigment values. Oxygen samples were analyzed in the laboratory at the Institute of Ocean Sciences using an automated Winkler titration system (Metrohm Dosimat model 876, (Metrohm Dosimat model 876 and a UV light source and detector with a 365nm filter controlled by LV02_876 software designed and constructed by Scripps Institution of Oceanography) with modifications based on Carpenter (1965) and adhering to WOCE protocols (Culberson 1991). For details including a precision analysis, see document QF2022-075OXY*.xlsx. Salinity samples were collected in 200 mL type ll glass bottles with disposable nylon inserts and screw caps supplied by Ocean Scientific International Limited. They were analyzed in a temperature-controlled lab on a Guildline 8400B Salinometer standardized with IAPSO standard seawater 21 - 42 days after collection. For details including a duplicate analysis, see document QF2022-075SAL*.xlsx. Nutrient samples were collected in plastic tubes and quick frozen in aluminum blocks stored in a -20C freezer. For samples 400m and deeper a second set of samples are collected and stored cool for silicate analysis. All samples were returned to the Institute of Ocean Sciences and they were analyzed using an Astoria-Pacific Analyzer following methods described in IOS Nutrient Methods (1996) Barwell-Clarke and Whitney. For details including a duplicate analysis, see document QF2022-075nuts*.xlsx. References: 1. Barwell-Clarke, J. and Whitney, F. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. 2. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 3. Culberson, C.H. 1991. Dissolved oxygen. WOCE Hydrographic Programme Operations and Methods (July 1991). 15pp. 4. Holm-Hansen, O., Lorenzen, C.J., Holmes, R.W., and Strickland J.D.H. 1965. Fluorometric Determination of Chlorophyll. J.du Cons. Intl. Pour l’Epl. De la Mer. 30:3-15. * For PDF versions of these papers see folder \\Cruise_Data\DOCUMENTS\Analysis Reference Papers --------------------------------------------------------------------------------- CTD Data Processing Notes: -------------------------- Conductivity and Transmissivity data are nominal and unedited except that some records were removed in editing temperature and salinity. Waits before firing Niskin bottles were generally 60s. The SBE DO sensor calibration changed during a previous use in 2022. No change was noted during this cruise, though the correction (based on comparison with titrated samples) is larger than normally seen for this type of sensor. Channel Fluorescence:URU:SeaPoint was removed because the values found were extremely low and compar Files that include fluorescence may be obtained by sending a request to: PAC SCI IOS Data / Données ISO SCI PAC (DFO/MPO) For details on the processing see the report: 2022-075_Processing_Report.doc. --------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- -------- ---- ------ ------------ Silicate umol/L 120 -99 (Salinity:T1:C1) (0.904 0.3E-02 25) Salinity:T0:C0 PSS-78 10 -99 () (0.8E-02 1) Salinity:T1:C1 PSS-78 10 -99 () (0.2E-02 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (0.255E-01 1.0939) $END !1- 2- --3--- --4--- ---5---- --6-- --7-- ---8---- --9--- --10- ----11--- -12- -13- --14-- 15 --16-- 17 ---18-- 19 !Bo Bo Pressu Depth Temperat Trans Trans Salinity Oxygen Oxyge Conductiv Numb Samp Nitrat Fl Silica Fl Phospha Fl !tt tt re ure: missi missi :T1:C1 : n: ity: er_o le_ e_ ag te ag te ag !~i ~u Secondar vity vity: Dissol Disso Secondary ~bin Numb plus_ ~t ~i ~p !ti mb y Green ved: lved: _rec er Nitrit ri ca ha !on er SBE SBE ords e te te te !-- -- ------ ------ -------- ----- ----- -------- ------ ----- --------- ---- ---- ------ -- ------ -- ------- -- *END OF HEADER 12 12 0.9 0.8 11.7617 46.6 67.9 21.3061 7.79 342.5 2.538617 241 225 -99.00 0 -99.00 0 -99.000 0 11 11 0.9 0.8 11.7783 46.5 67.6 21.1121 7.79 342.6 2.518562 44 224 0.05 0 32.75 0 0.053 0 10 10 5.1 5.0 9.6232 31.6 49.3 29.6173 6.21 271.2 3.246583 241 223 12.70 0 36.49 0 1.392 0 9 9 10.0 9.9 8.2811 56.0 85.4 30.7128 3.34 145.7 3.242620 241 222 24.73 0 40.48 0 2.030 0 8 8 19.9 19.7 8.1342 56.0 85.8 31.1535 3.17 138.2 3.272629 241 221 26.27 0 46.07 0 2.158 0 7 7 50.0 49.5 7.7903 55.8 86.0 32.0292 2.76 120.3 3.327185 241 220 27.84 0 52.23 0 2.281 0 6 6 100.0 99.1 7.3755 54.6 83.9 32.9252 2.05 89.2 3.376668 241 219 30.33 0 57.79 0 2.481 0 5 5 200.3 198.5 6.9330 54.8 84.5 33.2048 2.26 98.4 3.367829 241 218 31.24 0 60.10 0 2.517 0 4 4 299.9 297.1 6.9177 54.1 83.9 33.2285 2.17 94.3 3.372982 241 217 31.60 0 61.57 0 2.524 0 3 3 400.4 396.5 6.9189 54.1 82.5 33.2465 2.10 91.4 3.379076 241 216 31.80 0 62.68 0 2.570 0 2 2 493.1 488.1 6.9237 52.1 78.6 33.2581 2.04 88.6 3.384536 241 215 32.43 6 63.92 36 2.624 6 1 1 493.1 488.1 6.9237 52.0 79.3 33.2583 2.03 88.4 3.384563 38 214 -99.00 0 -99.00 0 -99.000 0