*2023/04/18 09:00:46.43 *IOS HEADER VERSION 2.0 2016/04/28 2016/06/13 IVF16 *FILE START TIME : UTC 2022/10/16 14:08:32.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 18 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : 93BAE382 NUMBER OF CHANNELS : 28 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- ---------------------------- --------------- -------------- -------------- 1 Bottle:Position n/a 1 18 2 Bottle_Number n/a 1 18 3 Pressure decibar 0.456 763.495 4 Depth metres 0.452 755.387 5 Temperature:Secondary 'deg C (ITS90)' 6.2505 10.3873 6 Transmissivity %/metre 43.7 55.8 7 Transmissivity:Green %/metre 62.9 87.5 8 Salinity:T1:C1 PSS-78 31.0221 33.6691 9 Oxygen:Dissolved:SBE mL/L 1.494 5.048 10 Oxygen:Dissolved:SBE umol/kg 65 220.2 11 Conductivity:Secondary S/m 3.35379 3.450776 12 Number_of_bin_records n/a 39 241 13 Sample_Number n/a 126 143 14 Temperature:Draw 'deg C (ITS90)' 7.1 10.7 15 Salinity:Bottle PSS-78 30.9388 33.6723 16 Flag:Salinity:Bottle ' ' 17 Chlorophyll:Extracted mg/m^3 0.17 1.86 18 Flag:Chlorophyll:Extracted ' ' 19 Phaeo-Pigment:Extracted mg/m^3 0.28 0.72 20 Oxygen:Dissolved mL/L 1.515 4.855 21 Oxygen:Dissolved umol/kg 65.92239 211.7961 22 Flag:Oxygen:Dissolved ' ' 23 Nitrate_plus_Nitrite umol/L 18.26 36.64 24 Flag:Nitrate_plus_Nitrite ' ' 25 Silicate umol/L 36.77 73.8 26 Flag:Silicate ' ' 27 Phosphate umol/L 1.509 2.789 28 Flag:Phosphate ' ' $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 3 I I 0 2 -99 ' ' 3 I I 0 3 -99 ' ' 7 F ' ' 1 4 -99 ' ' 7 F ' ' 1 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 6 F ' ' 1 7 -99 ' ' 6 F ' ' 1 8 -99 ' ' 9 F ' ' 4 9 -99 ' ' 7 F ' ' 2 10 -99 ' ' 6 F ' ' 1 11 -99 ' ' 10 F ' ' 6 12 ' ' ' ' 5 I I 0 13 -99 ' ' 5 I I 0 14 -99 ' ' 6 F R4 1 15 -99 ' ' 9 F R4 4 16 0 ' ' 3 NQ C ' ' 17 -99 ' ' 7 F R4 2 18 0 ' ' 3 NQ C ' ' 19 -99 ' ' 7 F R4 2 20 -99 ' ' 8 F R4 3 21 -99 ' ' 6 F ' ' 1 22 0 ' ' 3 NQ C ' ' 23 -99 ' ' 7 F R4 2 24 0 ' ' 3 NQ C ' ' 25 -99 ' ' 7 F R4 2 26 0 ' ' 3 NQ C ' ' 27 -99 ' ' 8 F R4 3 28 0 ' ' 3 NQ C ' ' $END $REMARKS Quality flags have the following significance: ---------------------------------------------------------------------------------- 0 = Acceptable measurement with no header comment 1 = Sample for this measurement was collected but not analyzed. Sample lost. 2 = Acceptable measurement with header comment 3 = Questionable measurement (Probably Good) 4 = Poor measurement (Probably Bad) 5 = Measurement not reported (Bad) 6 = Mean of replicate measurements 7 = Manual chromatographic peak measurement 8 = Irregular digital chromatographic peak integration 9 = Sample was planned for this measurement from this bottle but was not collected ---------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2022-075 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : Inlets SCIENTIST : Johannessen S. PLATFORM : Sir John Franklin *LOCATION GEOGRAPHIC AREA : B.C. Inlets STATION : FC1 EVENT NUMBER : 31 LATITUDE : 52 31.09000 N ! (deg min) LONGITUDE : 128 27.95000 W ! (deg min) WATER DEPTH : 760 ALTIMETER (M) : 5.03 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------------- -------------- ---------- Temperature ' ' 2449 Conductivity ' ' 1764 'Pressure:Digiquartz with TC' ' ' 0585 Temperature:2 ' ' 4484 Conductivity:2 ' ' 2128 'Oxygen:SBE 43' ' ' 1176 Fluorometer:Seapoint ' ' 2225 Altimeter ' ' 75321 'Transmissometer:WET Labs C-Star' ' ' 1185DR 'Transmissometer:WET Labs C-Star:2' ' ' 1883DG $END $REMARKS Software Version Seasave V 7.26.7.121 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 4.3 2023/03/22 15:03:57 3355 3355 CLEAN 5.3 2023/03/22 15:04:13 3355 3355 ADDSAMP 3.6 2023/03/22 16:21:15 3355 3355 MERGEHDR 1.3 2023/03/23 11:58:59 3355 3355 BINAVE 4.2.1 2023/03/23 12:10:38 3355 18 MERGE 3.6 2023/03/23 12:10:50 18 18 CLEAN 5.3 2023/03/23 13:25:31 18 18 CALIB 12.1 2023/04/14 11:31:40 18 18 CALIB 12.1 2023/04/14 11:41:30 18 18 SORT 3.6 2023/04/14 13:48:37 18 18 CHGUNITS 3.2 2023/04/14 14:05:57 18 18 CHGUNITS 3.2 2023/04/14 14:06:00 18 18 REORDER 1.3.1 2023/04/14 14:06:47 ? ? REMOVECH 8.2 2023/04/14 14:07:39 18 18 HDREDIT2 3.2 2023/04/18 09:00:46 ? ? $END $REMARKS -CLEAN functions: 2023/03/22 15:04:09 20 Reset #RECS, MIN & MAX values in header. Interpolation by Channel 1: Scan_Number [n/a] in Pressure Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: D:\Telework\2022-075\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2023/03/23 12:10:50 Merge Channel: Bottle_Number Merge Scheme Used: 4: Add Secondary to Matching Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Sample_Number, Bottle:Position, Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Phaeo-Pigment:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Temperature:Draw, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate Primary file : D:\Telework\2022-075\Processing\hydro\2022-075-0031.samavg Secondary file: D:\Telework\2022-075\Processing\hydro\2022-075-0031.mrgcln1s 18 secondary records matched to primary records. Comments from secondary file: D:\Telework\2022-075\Processing\hydro\2022-075-0031.mrgcln1s ------------------------------------------------------------ -SORT parameters: 2023/03/23 10:44:01 Sorted in ascending order of channel Bottle_Number -CLEAN functions: 2023/03/23 13:25:31 20 Reset #RECS, MIN & MAX values in header. Change character data from " " to "0" in channels Flag:* Remove Sea-Bird comments from the header. -CALIB parameters: 2023/04/14 11:31:40 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = D:\Telework\2022-075\Processing\doc\2022-075-rcalsil.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 33 Silicate umol/L 120 0.9040000E+00 0.3000000E-02 0.2500000E+02 Salinity:T1:C1 -CALIB parameters: 2023/04/14 11:41:30 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = D:\Telework\2022-075\Processing\doc\2022-075-rcal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Salinity:T0:C0 PSS-78 10 0.8000000E-02 0.1000000E+01 15 Salinity:T1:C1 PSS-78 10 0.2000000E-02 0.1000000E+01 16 Oxygen:Dissolved:SBE mL/L 10 0.2550000E-01 0.1093900E+01 -SORT parameters: 2023/04/14 13:48:37 Sorted in ascending order of channel Pressure -CHANGE units: Temperature reference channel: Temperature:Secondary Salinity reference channel: Salinity:T1:C1 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg -CHANGE units: Temperature reference channel: Temperature:Draw Salinity reference channel: Salinity:T1:C1 'Oxygen:Dissolved' changed from mL/L to umol/kg -REMOVECH 2023/04/14 14:07:39 The following CHANNEL(S) were removed: Temperature:Primary [deg C (ITS90)] Fluorescence:URU:Seapoint [mg/m^3] Salinity:T0:C0 [PSS-78] Conductivity:Primary [S/m] Scan_Number Oxygen:Voltage:SBE [volts] Status:Pump Descent_Rate [m/s] Altimeter [metres] Flag -HEADER EDITS: 2023/04/18 09:00:46 Applied edit header: D:\Telework\2022-075\hydro\2022-075-bot-hdr.txt Channel 4: Depth [metres] Name: Depth:Salt_Water ==> Depth Channel 6: Transmissivity [%/metre] Name: Transmissivity:1 ==> Transmissivity Format: F8.3 ==> F6.1 Channel 7: Transmissivity:Green [%/metre] Name: Transmissivity:2 ==> Transmissivity:Green Channel 14: Temperature:Draw [deg C (ITS90)] Format: F7.2 ==> F6.1 $END *COMMENTS Comments from secondary file: D:\Telework\2022-075\Processing\hydro\2022-075-0031.mrgcln1s ------------------------------------------------------------ Comments from secondary file: D:\Telework\2022-075\Processing\hydro\2022-075-0031.sal ------------------------------------------------------- Sample_Number 143: SAL: Sample was collected in a small round amber glass bottle. Sample may not have been sealed as well as a standard salinity sample collection bottle with insert and screw cap. Comments from secondary file: D:\Telework\2022-075\Processing\hydro\2022-075-0031.oxy ------------------------------------------------------- Sample_Number 141: OXY: Possible Niskin misfire. Draw temperature seems to support thesis. Comments from secondary file: D:\Telework\2022-075\Processing\hydro\2022-075-0031.nut ------------------------------------------------------- Sample_Number 130: SIL: Data from frozen, cool samples empty Sample_Number 140: NUTS: Sample was cracked and moved to a new tube after thawing in hot water bath Analysis methods: ----------------- Chlorophyll samples were filtered onto 25mm GF/F filters and immediately frozen and stored in a -80C freezer until analysis. All samples were returned to the Institute of Ocean Sciences and analyzed 2 weeks after the cruise on a Turner Trilogy 7200-000 fluorometer, using methods described in Holm-Hansen et al (1965). Fluorescence readings taken before and after sample acidification were used to calculate chlorophyll and phaeopigment concentrations. For details see worksheet “CV%” in file QF2022-075_CHL*.xlsx. NOTE: Flags and comments apply to chlorophyll values only. No flags or comments are assigned for Phaeo-Pigment values. Oxygen samples were analyzed in the laboratory at the Institute of Ocean Sciences using an automated Winkler titration system (Metrohm Dosimat model 876, (Metrohm Dosimat model 876 and a UV light source and detector with a 365nm filter controlled by LV02_876 software designed and constructed by Scripps Institution of Oceanography) with modifications based on Carpenter (1965) and adhering to WOCE protocols (Culberson 1991). For details including a precision analysis, see document QF2022-075OXY*.xlsx. Salinity samples were collected in 200 mL type ll glass bottles with disposable nylon inserts and screw caps supplied by Ocean Scientific International Limited. They were analyzed in a temperature-controlled lab on a Guildline 8400B Salinometer standardized with IAPSO standard seawater 21 - 42 days after collection. For details including a duplicate analysis, see document QF2022-075SAL*.xlsx. Nutrient samples were collected in plastic tubes and quick frozen in aluminum blocks stored in a -20C freezer. For samples 400m and deeper a second set of samples are collected and stored cool for silicate analysis. All samples were returned to the Institute of Ocean Sciences and they were analyzed using an Astoria-Pacific Analyzer following methods described in IOS Nutrient Methods (1996) Barwell-Clarke and Whitney. For details including a duplicate analysis, see document QF2022-075nuts*.xlsx. References: 1. Barwell-Clarke, J. and Whitney, F. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. 2. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 3. Culberson, C.H. 1991. Dissolved oxygen. WOCE Hydrographic Programme Operations and Methods (July 1991). 15pp. 4. Holm-Hansen, O., Lorenzen, C.J., Holmes, R.W., and Strickland J.D.H. 1965. Fluorometric Determination of Chlorophyll. J.du Cons. Intl. Pour l’Epl. De la Mer. 30:3-15. * For PDF versions of these papers see folder \\Cruise_Data\DOCUMENTS\Analysis Reference Papers --------------------------------------------------------------------------------- CTD Data Processing Notes: -------------------------- Conductivity and Transmissivity data are nominal and unedited except that some records were removed in editing temperature and salinity. Waits before firing Niskin bottles were generally 60s. The SBE DO sensor calibration changed during a previous use in 2022. No change was noted during this cruise, though the correction (based on comparison with titrated samples) is larger than normally seen for this type of sensor. Channel Fluorescence:URU:SeaPoint was removed because the values found were extremely low and compar Files that include fluorescence may be obtained by sending a request to: PAC SCI IOS Data / Données ISO SCI PAC (DFO/MPO) For details on the processing see the report: 2022-075_Processing_Report.doc. --------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- -------- ---- ------ ------------ Silicate umol/L 120 -99 (Salinity:T1:C1) (0.904 0.3E-02 25) Salinity:T0:C0 PSS-78 10 -99 () (0.8E-02 1) Salinity:T1:C1 PSS-78 10 -99 () (0.2E-02 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (0.255E-01 1.0939) $END !1- 2- --3--- --4--- ---5---- --6-- --7-- ---8---- --9--- --10- ----11--- -12- -13- --14- ---15--- 16 --17-- 18 --19-- ---20-- --21- 22 --23-- 24 --25-- 26 ---27-- 28 !Bo Bo Pressu Depth Temperat Trans Trans Salinity Oxygen Oxyge Conductiv Numb Samp Tempe Salinity Fl Chloro Fl Phaeo- Oxygen: Oxyge Fl Nitrat Fl Silica Fl Phospha Fl !tt tt re ure: missi missi :T1:C1 : n: ity: er_o le_ ratur :Bottle ag phyll: ag Pigmen Dissolv n: ag e_ ag te ag te ag !~i ~u Secondar vity vity: Dissol Disso Secondary ~bin Numb e: ~o Extrac ~a t: ed Disso ~o plus_ ~t ~i ~p !ti mb y Green ved: lved: _rec er Draw tt ted ct Extrac lved lv Nitrit ri ca ha !on er SBE SBE ords le ed ted ed e te te te !-- -- ------ ------ -------- ----- ----- -------- ------ ----- --------- ---- ---- ----- -------- -- ------ -- ------ ------- ----- -- ------ -- ------ -- ------- -- *END OF HEADER 17 17 0.5 0.5 10.3873 43.9 63.4 31.0221 5.04 219.8 3.450213 42 142 -99.0 31.0264 0 -99.00 0 -99.00 -99.000 -99.0 0 -99.00 0 -99.00 0 -99.000 0 16 16 0.5 0.5 10.3862 43.7 62.9 31.0222 5.03 219.5 3.450130 43 141 7.5 33.3466 0 0.17 0 0.28 1.726 75.3 4 34.69 0 68.12 0 2.616 0 18 18 0.5 0.5 10.3872 43.8 63.5 31.0221 5.05 220.2 3.450207 241 143 -99.0 30.9388 2 -99.00 0 -99.00 -99.000 -99.0 0 -99.00 0 -99.00 0 -99.000 0 15 15 5.4 5.3 10.3778 43.9 63.7 31.0338 4.97 217.0 3.450776 241 140 10.7 31.0721 0 -99.00 0 -99.00 4.855 211.8 0 18.26 3 36.77 3 1.509 3 14 14 10.3 10.2 10.2748 44.5 64.8 31.0831 4.81 209.9 3.447107 241 139 10.4 31.2093 0 1.86 6 0.72 4.482 195.5 0 19.55 0 38.87 0 1.577 0 13 13 20.4 20.2 9.4989 50.9 75.7 31.4169 3.99 173.9 3.414069 241 138 9.8 31.5039 0 0.98 0 0.63 3.862 168.4 0 22.84 0 43.97 0 1.788 0 12 12 50.4 50.0 8.3440 54.5 83.6 32.0424 3.19 139.0 3.376192 241 137 -99.0 -99.0000 0 -99.00 0 -99.00 -99.000 -99.0 0 -99.00 0 -99.00 0 -99.000 0 11 11 50.4 50.0 8.3451 54.5 83.5 32.0420 3.19 139.0 3.376249 52 136 8.8 32.1343 0 -99.00 0 -99.00 3.087 134.5 0 27.23 0 51.95 0 2.118 0 10 10 100.2 99.3 6.9797 55.8 87.5 33.1788 2.11 91.6 3.365180 241 135 7.7 33.1582 6 -99.00 0 -99.00 2.005 87.3 0 33.01 0 60.51 0 2.458 0 9 9 200.9 199.1 6.3412 53.2 82.5 33.6265 1.61 70.2 3.353790 241 134 7.3 33.6280 0 -99.00 0 -99.00 1.611 70.1 6 35.91 0 69.28 0 2.668 0 8 8 300.7 297.9 6.2885 53.7 84.0 33.6475 1.58 68.9 3.355401 241 133 7.2 33.6499 0 -99.00 0 -99.00 1.593 69.3 0 35.98 0 70.88 0 2.676 0 7 7 400.3 396.4 6.2505 54.6 85.5 33.6542 1.58 68.6 3.356981 241 132 7.1 33.6564 0 -99.00 0 -99.00 1.579 68.7 0 36.03 0 70.98 0 2.689 0 6 6 500.0 495.0 6.2640 53.8 84.1 33.6624 1.56 67.9 3.363251 241 131 7.1 33.6655 0 -99.00 0 -99.00 1.569 68.3 0 36.64 6 70.99 6 2.732 6 5 5 600.3 594.2 6.2727 52.8 82.0 33.6674 1.54 67.1 3.368799 241 130 7.1 33.6693 0 -99.00 0 -99.00 1.555 67.7 0 35.97 0 71.93 3 2.715 0 4 4 700.0 692.7 6.2818 50.4 77.4 33.6691 1.51 65.7 3.374024 241 129 7.1 33.6715 0 -99.00 0 -99.00 1.523 66.3 0 35.92 0 72.72 0 2.742 0 3 3 763.5 755.4 6.2885 47.1 70.7 33.6691 1.49 65.0 3.377313 241 128 7.1 33.6723 0 -99.00 0 -99.00 1.515 65.9 0 35.90 0 73.80 0 2.789 0 2 2 763.5 755.4 6.2885 46.2 68.4 33.6691 1.50 65.2 3.377320 46 127 -99.0 -99.0000 0 -99.00 0 -99.00 -99.000 -99.0 0 -99.00 0 -99.00 0 -99.000 0 1 1 763.5 755.4 6.2886 46.5 69.4 33.6691 1.50 65.1 3.377324 39 126 -99.0 -99.0000 0 -99.00 0 -99.00 -99.000 -99.0 0 -99.00 0 -99.00 0 -99.000 0