*2021/11/12 15:40:17.04 *IOS HEADER VERSION 2.0 2016/04/28 2016/06/13 IVF16 *FILE START TIME : UTC 2021/06/02 18:29:01.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 3 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : 45260145 NUMBER OF CHANNELS : 20 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- ---------------------------- --------------- -------------- -------------- 1 Bottle:Firing_Sequence n/a 1 3 2 Bottle:Firing_Sequence n/a 1 3 3 Pressure decibar 1.83 472.93 4 Depth metres 2.607 469.192 5 Temperature:Primary 'deg C (ITS90)' 5.2618 12.2467 6 Conductivity:Primary S/m 3.310148 3.68722 7 Transmissivity %/metre 44.6 57.9 8 Transmissivity:Green %/metre 63 89.5 9 Fluorescence:URU:Seapoint mg/m^3 0.86E-01 0.474 10 PAR uE/m^2/sec 0 917.152 11 Salinity:T0:C0 PSS-78 31.7539 34.076 12 Oxygen:Dissolved:SBE mL/L 0.829 6.802 13 Oxygen:Dissolved:SBE umol/kg 36.1 296.6 14 Sample_Number n/a 1 3 15 Number_of_bin_records n/a 59 241 16 Salinity:Bottle PSS-78 31.756 31.756 17 Flag:Salinity:Bottle ' ' 18 Chlorophyll:Extracted mg/m^3 0.89 0.89 19 Flag:Chlorophyll:Extracted ' ' 20 Phaeo-Pigment:Extracted mg/m^3 0.16 0.16 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 3 I I 0 2 -99 ' ' 3 I I 0 3 -99 ' ' 7 F ' ' 1 4 -99 ' ' 7 F ' ' 1 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 10 F ' ' 6 7 -99 ' ' 6 F ' ' 1 8 -99 ' ' 6 F ' ' 1 9 -99 ' ' 8 F ' ' 3 10 -99 ' ' 7 F ' ' 1 11 -99 ' ' 9 F ' ' 4 12 -99 ' ' 7 F ' ' 2 13 -99 ' ' 6 F ' ' 1 14 -99 ' ' 5 I I 0 15 ' ' ' ' 5 I I 0 16 -99 ' ' 9 F R4 4 17 0 ' ' 3 NQ C ' ' 18 -99 ' ' 7 F R4 2 19 0 ' ' 3 NQ C ' ' 20 -99 ' ' 7 F R4 2 $END $REMARKS Quality flags have the following significance: ---------------------------------------------------------------------------------- 0 = Acceptable measurement with no header comment 1 = Sample for this measurement was collected but not analyzed. Sample lost. 2 = Acceptable measurement with header comment 3 = Questionable measurement (Probably Good) 4 = Poor measurement (Probably Bad) 5 = Measurement not reported (Bad) 6 = Mean of replicate measurements 7 = Manual chromatographic peak measurement 8 = Irregular digital chromatographic peak integration 9 = Sample was planned for this measurement from this bottle but was not collected ---------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2021-069 AGENCY : IOS, Ocean Science Division, Sidney, B.C. COUNTRY : Canada PROJECT : IOS Moorings SCIENTIST : Spear D. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : B.C. Coast STATION : A1 EVENT NUMBER : 2 LATITUDE : 48 32.28000 N ! (deg min) LONGITUDE : 126 11.56000 W ! (deg min) WATER DEPTH : 490 ALTIMETER (M) : 2.975 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 LOCATION : Mid-ship ! custom item $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------------- -------------- ---------- Temperature ' ' 4700 Conductivity ' ' 3531 'Pressure:Digiquartz with TC' ' ' 0443 Temperature:2 ' ' 4888 Conductivity:2 ' ' 4513 'Oxygen:SBE 43' ' ' 3791 Fluorometer:Seapoint ' ' 3950 PAR/Irradiance:Biospherical/Licor ' ' 70613 'Transmissometer:WET Labs C-Star' ' ' 1185DR 'Transmissometer:WET Labs C-Star:2' ' ' 1883DG Altimeter ' ' 75321 $END $REMARKS Software Version Seasave V 7.26.7.121 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 4.3 2021/10/20 10:50:57 541 541 CLEAN 5.2.4 2021/10/21 12:06:01 541 541 ADDSAMP 3.6 2021/10/21 13:37:27 541 541 BINAVE 4.2.1 2021/10/21 13:38:08 541 3 MERGE 3.6 2021/10/21 16:09:43 3 3 CLEAN 5.2.4 2021/10/21 16:09:49 3 3 CALIB 12.0.1 2021/11/02 16:36:19 3 3 SORT 3.6 2021/11/03 11:59:43 3 3 REMOVECH 8.2 2021/11/03 12:28:03 3 3 CHGUNITS 3.2 2021/11/03 13:09:40 3 3 CHGUNITS 3.2 2021/11/03 13:09:44 3 3 REORDER 1.3.1 2021/11/03 13:10:02 ? ? HDREDIT2 3.2 2021/11/03 13:13:20 ? ? HDREDIT2 3.2 2021/11/12 15:40:17 ? ? $END $REMARKS -CLEAN functions: 2021/10/21 12:06:01 Reset #RECS, MIN & MAX values in header. Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: D:\Telework\2021-069\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2021/10/21 16:09:43 Merge Channel: Bottle_Number Merge Scheme Used: 4: Add Secondary to Matching Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Phaeo-Pigment:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Temperature:Draw, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Dimethyl_Sulphide, Flag:Dimethyl_Sulphide, Dimethylsulfoniopropionate_Dissolved, Flag:Dimethylsulfoniopropionate_Dissolved, Dimethylsulfoniopropionate_Total, Flag:Dimethylsulfoniopropionate_Total, Ammonium, Flag:Ammonium Primary file : D:\Telework\2021-069\Processing\hydro\2021-069-0002.samavg Secondary file: D:\Telework\2021-069\Processing\hydro\2021-069-0002.mrgcln1s 3 secondary records matched to primary records. -SORT parameters: 2021/10/21 16:09:15 Sorted in ascending order of channel Bottle_Number -CLEAN functions: 2021/10/21 16:09:49 Reset #RECS, MIN & MAX values in header. Change character data from " " to "0" in channels Flag:* Remove remark heading: "Comments from secondary" -CALIB parameters: 2021/11/02 16:36:19 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = D:\Telework\2021-069\Processing\doc\2021-069-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 4 Pressure decibar 10 -0.8000000E+00 0.1000000E+01 20 Oxygen:Dissolved:SBE mL/L 10 -0.1800000E-02 0.1053600E+01 -SORT parameters: 2021/11/03 11:59:43 Sorted in ascending order of channel Pressure -REMOVECH 2021/11/03 12:28:03 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Status:Pump Altimeter [metres] Descent_Rate [m/s] Salinity:T1:C1 [PSS-78] Flag -CHANGE units: Temperature reference channel: Temperature:Primary Salinity reference channel: Salinity:T0:C0 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg -CHANGE units: Temperature reference channel: Temperature:Draw Salinity reference channel: Salinity:T0:C0 - No units changed -HEADER EDITS: 2021/11/03 13:13:20 Applied edit header: D:\Telework\2021-069\Processing\doc\HYDRO\2021-006-bot-hdr.txt Channel 1: Bottle:Firing_Sequence [n/a] Name: Bottle_Number ==> Bottle:Firing_Sequence Channel 2: Bottle_Number [n/a] Name: Bottle:Position ==> Bottle_Number Channel 4: Depth [metres] Name: Depth:Salt_Water ==> Depth Format: F9.4 ==> F7.1 Channel 7: Transmissivity [%/metre] Name: Transmissivity:1 ==> Transmissivity Format: F9.4 ==> F6.1 Channel 8: Transmissivity:Green [%/metre] Name: Transmissivity:2 ==> Transmissivity:Green -HEADER EDITS: 2021/11/12 15:40:17 Channel 2: Bottle:Firing_Sequence [n/a] Name: Bottle_Number ==> Bottle:Firing_Sequence $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\CTD data\2021-069\2021-069-0001.hdr Software Version Seasave V 7.26.7.121 Temperature SN = 4700 Conductivity SN = 3531 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jun 02 2021 18:29:01 NMEA Latitude = 48 32.28 N NMEA Longitude = 126 11.56 W NMEA UTC (Time) = Jun 02 2021 18:28:09 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Tully: 2021-069 Station: A1 Depth: 490 System UTC = Jun 02 2021 18:29:01 # nquan = 21 # nvalues = 541 # units = specified # name 0 = scan: Scan Count # name 1 = bpos: Bottle Position in Carousel # name 2 = nbf: Bottles Fired # name 3 = prDM: Pressure, Digiquartz [db] # name 4 = depSM: Depth [salt water, m] # name 5 = t090C: Temperature [ITS-90, deg C] # name 6 = t190C: Temperature, 2 [ITS-90, deg C] # name 7 = c0S/m: Conductivity [S/m] # name 8 = c1S/m: Conductivity, 2 [S/m] # name 9 = CStarTr0: Beam Transmission, WET Labs C-Star [%] # name 10 = CStarTr1: Beam Transmission, WET Labs C-Star, 2 [%] # name 11 = flSP: Fluorescence, Seapoint # name 12 = sbeox0V: Oxygen raw, SBE 43 [V] # name 13 = par: PAR/Irradiance, Biospherical/Licor # name 14 = pumps: Pump Status # name 15 = altM: Altimeter [m] # name 16 = dz/dtM: Descent Rate [m/s] # name 17 = sal00: Salinity, Practical [PSU] # name 18 = sal11: Salinity, Practical, 2 [PSU] # name 19 = sbeox0ML/L: Oxygen, SBE 43 [ml/l] # name 20 = flag: 0.000e+00 # interval = seconds: 0.0416667 # start_time = Jun 02 2021 18:29:01 [System UTC, header] # bad_flag = -9.990e-29 # # # # # 4700 # 12-Dec-20 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.34744496e-003 # 6.38231870e-004 # 2.10953096e-005 # 1.79186371e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3531 # 06-Jan-21 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.00921127e+001 # 1.54474443e+000 # -2.54963711e-003 # 2.95252222e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0443 # 07-Jan-21 # -4.435292e+004 # -1.635794e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993627e+001 # -3.271008e-004 # 3.759160e-006 # 1.565300e-009 # 0.99989502 # -0.38836 # 0.000000e+000 # 1.282462e-002 # -8.599824e+000 # # # # # # 4888 # 12-Dec-20 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.32604412e-003 # 6.34365670e-004 # 2.18217362e-005 # 2.02364598e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 4513 # 18-Dec-20 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.00676289e+001 # 1.38093586e+000 # -1.32984366e-003 # 1.69158499e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 3791 # 22-Dec-20 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.1609e-001 # -0.7169 # -4.3461e-003 # 1.7263e-004 # -3.0839e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.4600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 3950 # # # 2 # 0.000 # # # # # # 70613 # 2021-02-24 # 1.00000000 # 0.00000000 # 8620689655.17000010 # 1.00000000 # -0.11660000 # # # # # # # # # 1185DR # 2021-04-28 # 19.7050 # -1.0828 # 0.250 # # # # # # 1883DG # 2021-04-28 # 20.5546 # -0.0502 # 0.250 # # # # # # 75321 # 23-sep-2020 # 15.000 # 0.000 # # # # # # # datcnv_date = Oct 19 2021 13:16:30, 7.23.2 # datcnv_in = D:\Telework\2021-069\Unprocessed\2021-069-0001.hex D:\Telework\202 1-069\Processing\doc\2021-069-ctd.xmlcon # datcnv_ox_hysteresis_correction = yes # datcnv_ox_tau_correction = yes # datcnv_bottle_scan_range_source = BL file # datcnv_scans_per_bottle = 241 END* Analysis methods: ----------------- Chlorophyll samples were filtered onto 25mm GF/F filters and stored in glass scintillation vials at -80C prior to analysis. Samples were extracted in 90% acetone at -20C for 24 hours in the lab and analyzed on a Turner 10AU fluorometer calibrated with commercially pure chlorophyll a standard (Sigma). Fluorescence readings taken before and after acidification were used to calculate chlorophyll and phaeopigment concentrations (Holm-Hansen et al 1965). Chlorophyll samples were analyzed at IOS in Room 2423 ~12 weeks after the cruise. Variability is assessed as the CV% (std dev / mean*100). Flags and comments apply to chlorophyll values only. Chlorophyll values ranged from 0.04-13.24ug/l in 146 samples. Average %CV for this cruise was 7.05% with 10 out of 35 duplicate pairs having a CV>10% and 0 duplicate pairs having a CV>30% . Our average dataset %CV is 3.83% for 2013 - 2020 so the overall quality of this dataset is acceptable. For details see worksheet “CV%” in file QF2021-069_CHL*.xlsx. Oxygen samples were analyzed at sea using an automated Winkler titration System (Metrohm Dosimat model 876 and a UV light source and detector with a 365nm filter controlled by LV02_876 software designed and constructed by Scripps Institution of Oceanography) with modifications based on Carpenter (1965) and adhering to WOCE protocols (Culberson 1991). For details including a duplicate analysis, see document QF2021-069OXY*.xlsx. Salinity samples were collected in 200 mL type ll glass bottles with disposable nylon inserts and screw caps supplied by Ocean Scientific International Limited. They were analyzed in a temperature-controlled lab on a Guildline 8400B Salinometer standardized with IAPSO standard seawater 50 - 61 days after collection. For details including a duplicate analysis, see document QF2020-069SAL*.xlsx. Nutrient samples were collected in plastic tubes and quick frozen in aluminum blocks stored in a -20C freezer. For samples 400m and deeper a second set of samples are collected and stored cool for silicate analysis. All samples were returned to the Insitute of Ocean Sciences and they were analyzed using an Astoria-Pacific Analyzer following methods described in IOS Nutrient Methods (1996) Barwell-Clarke and Whitney. For details including a duplicate analysis, see document QF2020-069nuts*.xlsx. References: 1. Barwell-Clarke, J. and Whitney, F. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. 2. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 3. Culberson, C.H. 1991. Dissolved oxygen. WOCE Hydrographic Programme Operations and Methods (July 1991). 15pp. 4. Holm-Hansen, O., Lorenzen, C.J., Holmes, R.W., and Strickland J.D.H. 1965. Fluorometric Determination of Chlorophyll. J.du Cons. Intl. Pour l’Epl. De la Mer. 30:3-15. * For PDF versions of these papers see folder \\Cruise_Data\DOCUMENTS\Analysis Reference Papers --------------------------------------------------------------------------------- CTD Data Processing Notes: -------------------------- Conductivity, Transmissivity, Fluorescence:URU:Seapoint and PAR data are nominal and unedited except that some records were removed in editing temperature and salinity. There were 2 WetLabs CStar transmissometers in use during this cruise: Channel Transmissometer refers to sensor #1185DR (650nm - red) Channel Transmissometer:Green refers to sensor #1883DG (530nm - green) For comparison with other Institute of Ocean Sciences cruises, note that the transmissometer wavelength is 650nm unless otherwise stated. NOTE: While the CTD fluorescence data are expressed in concentration units, they do not always compare well to extracted chlorophyll samples, particularly for casts far from shore. It is recommended that users check extracted chlorophyll values where available. For details on the processing see the report: 2021-069_Processing_Report.doc. --------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- --------- ---- ------ ------------ Pressure decibar 10 -99 () (-0.8 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (-0.18E-02 1.0536) $END !1- 2- --3--- --4--- ---5---- ----6---- --7-- --8-- ---9--- --10-- ---11--- --12-- --13- -14- -15- ---16--- 17 --18-- 19 --20-- !Bo Bo Pressu Depth Temperat Conductiv Trans Trans Fluores PAR Salinity Oxygen Oxyge Samp Numb Salinity Fl Chloro Fl Phaeo- !tt tt re ure: ity: missi missi cence: :T0:C0 : n: le_ er_o :Bottle ag phyll: ag Pigmen !~u ~u Primary Primary vity vity: URU: Dissol Disso Numb ~bin ~o Extrac ~a t: !en en Green Seapoin ved: lved: er _rec tt ted ct Extrac !ce ce t SBE SBE ords le ed ted !-- -- ------ ------ -------- --------- ----- ----- ------- ------ -------- ------ ----- ---- ---- -------- -- ------ -- ------ *END OF HEADER 2 2 1.8 2.6 12.2030 3.684064 44.6 63.0 0.472 917.2 31.7608 6.80 296.6 2 59 31.7560 0 0.89 6 0.16 3 3 2.0 2.8 12.2467 3.687220 44.8 63.4 0.474 617.5 31.7539 6.78 295.7 3 241 -99.0000 0 -99.00 0 -99.00 1 1 472.9 469.2 5.2618 3.310148 57.9 89.5 0.086 0.0 34.0760 0.83 36.1 1 241 -99.0000 0 -99.00 0 -99.00