*2019/08/20 11:20:13.65 *IOS HEADER VERSION 2.0 2016/04/28 2016/06/13 IVF16 *FILE START TIME : UTC 2019/04/15 15:14:49.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 6 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : 26DA818D NUMBER OF CHANNELS : 22 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Bottle:Firing_Sequence n/a 1 6 2 Bottle_Number n/a 1 6 3 Pressure decibar 2.15 39.987 4 Depth metres 2.132 39.642 5 Temperature:Secondary 'deg C (ITS90)' 8.5915 9.4097 6 Conductivity:Secondary S/m 3.154177 3.177948 7 Transmissivity %/metre 6.7 56 8 Fluorescence:URU:Seapoint mg/m^3 0.89E-01 16.563 9 PAR uE/m^2/sec 0.14E-01 148.484 10 PAR:Reference uE/m^2/sec 343.955 355.62 11 pH:SBE:Nominal n/a 7.665 8.194 12 Salinity:T1:C1 PSS-78 28.8563 29.7174 13 Oxygen:Dissolved:SBE mL/L 4.258 8.231 14 Oxygen:Dissolved:SBE umol/kg 185.8 359.5 15 Sample_Number n/a 1 6 16 Number_of_bin_records n/a 241 241 17 Temperature:Draw 'deg C (ITS90)' 8.9 9.4 18 Salinity:Bottle PSS-78 29.669 29.669 19 Flag:Salinity:Bottle n/a 20 Oxygen:Dissolved mL/L 4.281 7.671 21 Oxygen:Dissolved umol/kg 186.8343 335.0007 22 Flag:Oxygen:Dissolved ' ' $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 3 I I 0 2 -99 ' ' 3 I I 0 3 -99 ' ' 7 F ' ' 1 4 -99 ' ' 7 F ' ' 1 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 10 F ' ' 6 7 -99 ' ' 6 F ' ' 1 8 -99 ' ' 8 F ' ' 3 9 -99 ' ' 7 F ' ' 1 10 -99 ' ' 7 F ' ' 1 11 -99 ' ' 8 F ' ' 3 12 -99 ' ' 9 F ' ' 4 13 -99 ' ' 7 F ' ' 2 14 -99 ' ' 6 F ' ' 1 15 -99 ' ' 5 I I 0 16 ' ' ' ' 5 I I 0 17 -99 ' ' 6 F R4 1 18 -99 ' ' 9 F R4 4 19 0 ' ' 3 NQ C ' ' 20 -99 ' ' 8 F R4 3 21 -99 ' ' 6 F ' ' 1 22 0 ' ' 3 NQ C ' ' $END $REMARKS Flag channels were initialized with zeros. Non-zero values have the following significance: ---------------------------------------------------------------------------------- 1 = Sample for this measurement was collected but not analyzed. Sample lost. 2 = Acceptable Measurement 3 = Questionable Measurement (Probably Good) 4 = Poor Measurement (Probably Bad) 5 = Measurement Not Reported (Bad) 6 = Mean of replicate measurements 7 = Manual chromatographic peak measurement 8 = Irregular digital chromatographic peak integration 9 = Sample was planned for this measurement from this bottle but was not collected ---------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2019-038 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : Coastal Ecosystem Research Program SCIENTIST : Sutherland T. PLATFORM : Vector *LOCATION GEOGRAPHIC AREA : Baynes Sound STATION : BS 5 EVENT NUMBER : 2 LATITUDE : 49 35.84000 N ! (deg min) LONGITUDE : 124 51.57000 W ! (deg min) WATER DEPTH : 43 ALTIMETER (M) : 3.895 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0506 $REMARKS Software Version Seasave V 7.23.2 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 4.2.2 2019/06/27 09:07:25 1446 1446 CLEAN 5.2.3 2019/06/27 09:08:45 1446 1446 ADDSAMP 3.6 2019/06/27 09:51:22 1446 1446 BINAVE 4.2 2019/06/27 10:23:23 1446 6 MERGE 3.5 2019/08/20 11:18:34 6 6 CLEAN 5.2.3 2019/08/20 11:18:58 6 6 CALIB 12.0 2019/08/20 11:19:04 6 6 SORT 3.6 2019/08/20 11:19:28 6 6 REMOVECH 8.2 2019/08/20 11:19:35 6 6 CHGUNITS 3.1.1 2019/08/20 11:19:44 6 6 CHGUNITS 3.1.1 2019/08/20 11:19:58 6 6 REORDER 1.3.1 2019/08/20 11:20:07 ? ? HDREDIT2 3.1.1 2019/08/20 11:20:13 ? ? $END $REMARKS -CLEAN functions: 2019/06/27 09:08:45 Reset #RECS, MIN & MAX values in header. Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: P:\Cruise_Data_Processing\2019-038\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2019/08/20 11:18:34 Merge Channel: Bottle_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Temperature:Draw, Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Phaeo-Pigment:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate Primary file : Q:\OSD_DataProcessing\Cruise_Data\2019-038\Processing\hyd\2019-038-0002.samavg Secondary file: Q:\OSD_DataProcessing\Cruise_Data\2019-038\Processing\hyd\2019-038-0002.mrgcln1s Comments from secondary file: Q:\OSD_DataProcessing\Cruise_Data\2019-038\Processing\hyd\2019-038-0002.mrgcln1s --------------------------------------------------------------------------- -SORT parameters: 2019/08/20 11:18:10 Sorted in ascending order of channel Bottle_Number -CLEAN functions: 2019/08/20 11:18:58 Reset #RECS, MIN & MAX values in header. Change character data from " " to "0" in channels Flag:* Remove Sea-Bird comments from the header. -CALIB parameters: 2019/08/20 11:19:04 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\OSD_DataProcessing\Cruise_Data\2019-038\Processing\doc\2019-038-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 21 Oxygen:Dissolved:SBE mL/L 10 0.2750000E-01 0.1030000E+01 -SORT parameters: 2019/08/20 11:19:28 Sorted in ascending order of channel Press* -REMOVECH 2019/08/20 11:19:35 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Oxygen:Voltage:SBE [volts] Altimeter [metres] Descent_Rate [m/s] Status:Pump Salinity:T0:C0 [PSS-78] Flag -CHANGE units: Temperature reference channel: Temperature:Secondary [deg C (ITS90)] Salinity reference channel: Salinity:T1:C1 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg -CHANGE units: Temperature reference channel: Temperature:Draw Salinity reference channel: Salinity:T1:C1 'Oxygen:Dissolved' changed from mL/L to umol/kg -HEADER EDITS: 2019/08/20 11:20:13 Applied edit header: Q:\OSD_DataProcessing\Cruise_Data\2019-038\Processing\doc\HYD\2019-038-bot- hdr.txt Channel 1: Bottle:Firing_Sequence [n/a] Name: Bottle_Number ==> Bottle:Firing_Sequence Channel 2: Bottle_Number [n/a] Name: Bottle:Position ==> Bottle_Number Channel 3: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 7: Transmissivity [%/metre] Name: Transmissivity:1 ==> Transmissivity Channel 9: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 13: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 17: Temperature:Draw [deg C (ITS90)] Units: ==> deg C (ITS90) Format: F7.2 ==> F6.1 Channel 18: Salinity:Bottle [PSS-78] Units: ==> PSS-78 Channel 19: Flag:Salinity:Bottle [n/a] Units: ==> n/a Channel 20: Oxygen:Dissolved [mL/L] Units: ==> mL/L Channel 10: PAR:Reference [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 11: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a Channel 12: Salinity:T1:C1 [PSS-78] Format: F11.4 ==> F9.4 Channel 4: Depth [metres] Name: Depth:Salt_Water ==> Depth Format: F10.3 ==> F7.1 Channel 10: PAR:Reference [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 6: Conductivity:Secondary [S/m] Format: F11.6 ==> F10.6 $END *COMMENTS Comments from secondary file: Q:\OSD_DataProcessing\Cruise_Data\2019-038\Processing\hyd\2019-038-0002.mrgcln1s --------------------------------------------------------------------------- Comments from secondary file: Q:\OSD_DataProcessing\Cruise_Data\2019-038\Processing\hyd\2019-038-0002.sal --------------------------------------------------------------------------- Sample_Number 1: SAL: Deleted 2nd reading and toggled with flow rate; labelled as sample 5 but clearly came from Niskin #1 as on log sheet. Analysis methods: ----------------- Oxygen samples were analyzed at sea using an automated Winkler titration system (Metrohm Dosimat model 876 and a UV light source and detector with a 365nm filter controlled by LV02_876 software designed and constructed by Scripps Institution of Oceanography) with modifications based on Carpenter (1965) and adhering to WOCE protocols (Culberson 1991). For details including a duplicate analysis, see document QF 2019-038OXY*.xlsx. Salinity samples were collected in 200 mL type ll glass bottles with disposable nylon inserts and screw caps supplied by Ocean Scientific International Limited. They were analyzed in a temperature-controlled lab at IOS on a Guildline 8400B Salinometer (S/N 68572) standardized with IAPSO standard seawater 100-101 days after collection. There were no duplicates. For details see document QF2019-038SAL*.xls. References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. Culberson, C.H. 1991. Dissolved oxygen. WOCE Hydrographic Programme Operations and Methods (July 1991). 15pp. * For PDF versions of these papers see folder \\Cruise_Data\DOCUMENTS\Analysis Reference Papers --------------------------------------------------------------------------------- CTD Data Processing Notes: -------------------------- Conductivity, Transmissivity, Fluorescence:URU:Seapoint, pH:SBE, PAR and PAR:Reference data are nominal and unedited except that some records were removed in editing temperature and salinity. Dissolved oxygen was calibrated using the method described in SeaBird Application Note #64-2, June 2012 revision, except that a small offset in the fit was allowed. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data are available. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see document: 2019-038_Processing_Report.doc. -------------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.275E-01 1.03) $END !1- 2- --3--- --4--- ---5---- ----6---- --7-- ---8--- --9--- --10-- ---11-- ---12--- --13-- --14- -15- -16- --17- ---18--- 19 ---20-- --21- 22 !Bo Bo Pressu Depth Temperat Conductiv Trans Fluores PAR PAR: pH:SBE: Salinity Oxygen Oxyge Samp Numb Tempe Salinity Fl Oxygen: Oxyge Fl !tt tt re ure: ity: missi cence: Refere Nominal :T1:C1 : n: le_ er_o ratur :Bottle ag Dissolv n: ag !~u ~u Secondar Secondary vity URU: nce Dissol Disso Numb ~bin e: ~o ed Disso ~o !en mb y Seapoin ved: lved: er _rec Draw tt lved lv !ce er t SBE SBE ords le ed !-- -- ------ ------ -------- --------- ----- ------- ------ ------ ------- -------- ------ ----- ---- ---- ----- -------- -- ------- ----- -- *END OF HEADER 6 6 2.1 2.1 9.4097 3.154177 6.7 16.563 148.5 344.0 8.194 28.8563 8.23 359.5 6 241 9.4 -99.0000 0 7.671 335.0 0 5 5 5.0 5.0 9.2877 3.166860 14.4 12.008 23.5 345.7 8.066 29.0824 7.24 316.2 5 241 9.3 -99.0000 0 6.528 285.0 0 4 4 10.2 10.1 9.0102 3.177948 44.4 1.630 2.9 347.7 7.829 29.4209 5.52 241.1 4 241 9.1 -99.0000 0 5.176 225.9 0 3 3 19.7 19.6 8.6171 3.160674 56.0 0.191 0.4 351.6 7.704 29.5658 4.52 197.3 3 241 8.9 -99.0000 0 4.435 193.6 6 2 2 30.1 29.9 8.5915 3.167132 54.5 0.089 0.1 351.6 7.676 29.6498 4.28 186.6 2 241 9.1 -99.0000 0 4.281 186.8 0 1 1 40.0 39.6 8.6277 3.176997 47.5 0.157 0.0 355.6 7.665 29.7174 4.26 185.8 1 241 9.2 29.6690 2 4.301 187.7 0