*2021/01/20 08:37:05.15 *IOS HEADER VERSION 2.0 2016/04/28 2016/06/13 IVF16 *FILE START TIME : UTC 2019/05/30 03:56:18.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 55 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 663ACC5B NUMBER OF CHANNELS : 12 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 3.3 56.8 2 Depth metres 3.3 56.4 3 Temperature:Primary 'deg C (ITS90)' 8.4648 12.5697 4 Conductivity:Primary S/m 3.470646 3.70658 5 Transmissivity %/metre 17.9 47.7 6 Transmissivity:Green %/metre 27.3362 78.88104 7 Fluorescence:URU:Seapoint mg/m^3 0.254 7.509 8 PAR uE/m^2/sec 0 3.2 9 Salinity:T0:C0 PSS-78 31.6526 32.9353 10 Oxygen:Dissolved:SBE mL/L 3.58 8.04 11 Oxygen:Dissolved:SBE umol/kg 155.8 350.5 12 Number_of_bin_records n/a 14 39 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 10 F ' ' 6 5 -99 ' ' 6 F ' ' 1 6 -99 ' ' 6 F ' ' 1 7 -99 ' ' 8 F ' ' 3 8 -99 ' ' 7 F ' ' 1 9 -99 ' ' 9 F ' ' 4 10 -99 ' ' 7 F ' ' 2 11 -99 ' ' 6 F ' ' 1 12 -99 ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: Q:\OSD_DataProcessing\Cruise_Data\2019-005\Processing\derive\2019-005-0142.cnv $END *ADMINISTRATION MISSION : 2019-005 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : La Perouse SCIENTIST : Robert M. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : WCVI STATION : LC05 EVENT NUMBER : 142 LATITUDE : 48 40.11000 N ! (deg min) LONGITUDE : 125 47.05000 W ! (deg min) WATER DEPTH : 68.5 ALTIMETER (M) : 9.94 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0506 $REMARKS Software Version Seasave V 7.26.7.107 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 4.2.2 2019/10/01 10:02:50 6126 6126 CLEAN 5.2.3 2019/10/01 10:26:44 6126 6126 MERGEHDR 1.3 2019/10/01 11:17:38 6126 6126 SHIFTDAT 3.4 2019/10/01 15:11:45 6126 6126 SHIFTDAT 3.4 2019/10/01 16:26:32 6126 6126 SHIFTDAT 3.4 2019/10/01 17:07:49 6126 6126 DELETE 6.3 2019/10/02 07:57:00 6126 1447 CTDEDIT 5.2.3 2019/10/03 15:14:10 1447 1369 CALIB 12.0 2019/10/04 15:21:15 1369 1369 FILTERS 4.3 2019/10/04 15:25:22 1369 1369 BINAVE 4.2 2019/10/07 09:47:16 1369 55 REMOVECH 8.2 2019/10/07 10:29:40 55 55 CHGUNITS 3.1.1 2019/10/07 10:36:24 55 55 REORDER 1.3.1 2019/10/07 11:12:16 ? ? HDREDIT2 3.1.1 2019/10/22 08:49:26 ? ? HDREDIT2 3.2 2020/12/10 10:59:27 ? ? REORDER 1.3.1 2020/12/10 11:02:53 ? ? HDREDIT2 3.2 2020/12/10 11:07:44 ? ? HDREDIT2 3.2 2020/12/10 11:08:51 ? ? CALIB 12.0.1 2021/01/20 08:37:05 55 55 $END $REMARKS -CLEAN functions: 2019/10/01 10:21:24 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.70 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.70 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 47.24 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.2.3 2019/10/03 15:14:10 78 records were deleted in this editing session. 14 changes in channel Salinity:T0:C0 -CALIB parameters: 2019/10/04 15:21:15 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\OSD_DataProcessing\Cruise_Data\2019-005\Processing\doc\2019-005-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 16 Salinity:T0:C0 PSS-78 10 0.2300000E-02 0.1000000E+01 18 Oxygen:Dissolved:SBE mL/L 10 0.2260000E-01 0.1030000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2019/10/07 10:29:40 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Altimeter [metres] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: Temperature reference channel: Temperature:Primary Salinity reference channel: Salinity:T0:C0 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg -HEADER EDITS: 2019/10/22 08:49:26 Applied edit header: Q:\OSD_DataProcessing\Cruise_Data\2019-005\Processing\doc\2019-005-HDR.TXT Channel 4: Transmissivity [%/metre] Format: F8.3 ==> F6.1 Channel 7: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 9: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 12: Number_of_bin_records [n/a] Pad: ' ' ==> -99 Channel 11: Conductivity:Primary [S/m] Format: F11.6 ==> F10.6 Channel 5: Transmissivity2 [%/metre] Name: Transmissivity:2 ==> Transmissivity2 -HEADER EDITS: 2020/12/10 10:59:27 Channel 4: Transmissivity:Green [%/metre] Name: Transmissivity ==> Transmissivity:Green Channel 5: Transmissivity [%/metre] Name: Transmissivity2 ==> Transmissivity -HEADER EDITS: 2020/12/10 11:07:44 -HEADER EDITS: 2020/12/10 11:08:51 Applied edit header: C:\Users\Samantha\OneDrive\Documents\SH ios\HPLC\2019\2019-005-transmissivity\ 2019-005-trms-hdr1.txt -CALIB parameters: 2021/01/20 08:37:05 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = 2019-005-transcor.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 6 Transmissivity:Green %/metre 10 -0.2000000E-01 0.1439800E+01 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\CTD Data\2019-005\2019-005-0142.hex Software Version Seasave V 7.26.7.107 Temperature SN = 2023 Conductivity SN = 1763 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = May 30 2019 04:03:22 NMEA Latitude = 48 40.11 N NMEA Longitude = 125 47.05 W NMEA UTC (Time) = May 30 2019 03:56:18 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Tully: 2019-005 Station: LC05 Depth: 64 System UTC = May 30 2019 04:03:22 # nquan = 19 # nvalues = 6126 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = depSM: Depth [salt water, m] # name 3 = t090C: Temperature [ITS-90, deg C] # name 4 = t190C: Temperature, 2 [ITS-90, deg C] # name 5 = c0S/m: Conductivity [S/m] # name 6 = c1S/m: Conductivity, 2 [S/m] # name 7 = CStarTr0: Beam Transmission, WET Labs C-Star [%] # name 8 = CStarTr1: Beam Transmission, WET Labs C-Star, 2 [%] # name 9 = flSP: Fluorescence, Seapoint # name 10 = sbeox0V: Oxygen raw, SBE 43 [V] # name 11 = par: PAR/Irradiance, Biospherical/Licor # name 12 = altM: Altimeter [m] # name 13 = dz/dtM: Descent Rate [m/s] # name 14 = pumps: Pump Status # name 15 = sal00: Salinity, Practical [PSU] # name 16 = sal11: Salinity, Practical, 2 [PSU] # name 17 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 18 = flag: flag # span 0 = 1, 6126 # span 1 = 2.225, 57.239 # span 2 = 2.206, 56.747 # span 3 = 8.4645, 12.5810 # span 4 = 8.4641, 12.5805 # span 5 = 3.470608, 3.707750 # span 6 = 3.470870, 3.707971 # span 7 = 59.5525, 86.1758 # span 8 = 63.6196, 83.1549 # span 9 = 2.3199e-01, 1.0110e+01 # span 10 = 1.5114, 2.9572 # span 11 = 1.0000e-12, 5.1363e+00 # span 12 = 8.82, 63.25 # span 13 = -1.100, 1.256 # span 14 = 0, 1 # span 15 = 31.6068, 32.9350 # span 16 = 31.6180, 32.9383 # span 17 = 3.4304, 7.8812 # span 18 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = May 30 2019 03:56:18 [NMEA time, header] # bad_flag = -9.990e-29 # datcnv_date = Sep 04 2019 11:08:32, 7.26.7.129 [datcnv_vars = 15] # datcnv_in = Q:\OSD_DataProcessing\Cruise_Data\2019-005\Unprocessed\CTD\2019-00 5-0142.hex Q:\OSD_DataProcessing\Cruise_Data\2019-005\Processing\doc\2019-005-ctd.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Sep 04 2019 11:22:38, 7.26.7.129 # wildedit_in = Q:\OSD_DataProcessing\Cruise_Data\2019-005\Processing\convert\20 19-005-0142.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM depSM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Oct 01 2019 09:27:54, 7.26.7.129 # alignctd_in = Q:\OSD_DataProcessing\Cruise_Data\2019-005\Processing\wildedit\2 019-005-0142.cnv # alignctd_adv = sbeox0V 2.500 # celltm_date = Oct 01 2019 09:36:11, 7.26.7.129 # celltm_in = Q:\OSD_DataProcessing\Cruise_Data\2019-005\Processing\align\2019-0 05-0142.cnv # celltm_alpha = 0.0245, 0.0245 # celltm_tau = 9.5000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Oct 01 2019 09:54:52, 7.26.7.129 [derive_vars = 3] # Derive_in = Q:\OSD_DataProcessing\Cruise_Data\2019-005\Processing\celltm\2019- 005-0142.cnv Q:\OSD_DataProcessing\Cruise_Data\2019-005\Processing\doc\2019-005-ctd.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some near-surface records and records corrupted by shed wakes; salinity was cleaned. -------------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Conductivity, Transmissivity, Fluorescence and PAR data are nominal and unedited except that some records were removed in editing temperature and salinity. There were 2 WetLabs CStar transmissometers in use during this cruise: Channel Transmissometer refers to sensor #1185DR (650nm - red) Channel Transmissometer:Green refers to sensor #1883DG (530nm - green) For comparison with other Institute of Ocean Sciences cruises, note that the transmissometer wavelength is 650nm unless otherwise stated. NOTE: While the CTD fluorescence data are expressed in concentration units, they do not always compare well to extracted chlorophyll samples, particularly for casts far from shore. It is recommended that users check extracted chlorophyll values where available. Dissolved oxygen was calibrated using the method described in SeaBird Application Note #64-2, June 2012 revision, except that a small offset in the fit was allowed. The SBE DO sensor has a fairly long response time so data accuracy is not as high when it is in motion as it is during stops for bottles. This will be especially true when vertical DO gradients are large. To get an estimate of the accuracy of the SBE DO data during downcasts (after recalibration)a rough comparison was made between downcast SBE DO and upcast titrated samples. Some of the difference will be due to problems with flushing of Niskin bottles and/or analysis errors, so the following statement likely underestimates SBE DO accuracy. Downcast (CTD files) Oxygen:Dissolved:SBE data for are considered, very roughly, to be: ±0.5 mL/L from 0 to 50db ±0.3 mL/L from 50db to 250db ±0.10 mL/L from 250db to 500db ±0.02 mL/L below 500db For details on the CTD data processing see document: 2019-005_Processing_Report.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- --------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (0.23E-02 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (0.226E-01 1.03) Transmissivity:Green %/metre 10 -99 () (-0.2E-01 1.4398) $END !--1--- --2--- ---3---- ----4---- --5-- --6-- ---7--- --8--- ---9---- --10-- --11- -12- !Pressu Depth Temperat Conductiv Trans Trans Fluores PAR Salinity Oxygen Oxyge Numb !re ure: ity: missi missi cence: :T0:C0 : n: er_o ! Primary Primary vity vity: URU: Dissol Disso ~bin ! Green Seapoin ved: lved: _rec ! t SBE SBE ords !------ ------ -------- --------- ----- ----- ------- ------ -------- ------ ----- ---- *END OF HEADER 3.3 3.3 12.5458 3.703729 20.0 31.7 6.821 3.2 31.6609 8.02 349.8 14 4.0 4.0 12.5523 3.704517 20.5 31.9 6.766 2.6 31.6626 8.00 348.9 31 5.0 5.0 12.5697 3.706580 20.3 31.2 6.390 1.8 31.6666 8.00 348.7 30 6.0 5.9 12.5159 3.701034 19.8 31.2 6.627 1.3 31.6593 8.02 349.7 26 7.0 6.9 12.5117 3.700699 19.1 30.2 7.072 0.9 31.6593 8.03 350.2 24 8.0 7.9 12.4996 3.699290 18.6 28.9 7.373 0.6 31.6557 8.04 350.5 21 9.0 8.9 12.5134 3.700748 18.4 28.5 6.906 0.4 31.6576 8.02 349.5 20 10.0 9.9 12.5152 3.701015 19.0 29.1 7.005 0.3 31.6581 8.01 349.3 22 11.0 10.9 12.4976 3.698912 18.3 28.8 7.076 0.2 31.6526 8.00 349.0 25 12.0 11.9 12.4341 3.694027 18.6 28.8 7.239 0.2 31.6587 7.96 346.9 24 13.0 12.9 12.4132 3.692580 18.2 28.6 7.509 0.1 31.6623 7.75 337.7 22 14.0 13.9 12.4078 3.691615 17.9 27.3 7.313 0.1 31.6575 7.21 314.2 24 15.0 14.9 11.7011 3.636949 24.6 33.7 5.799 0.0 31.7308 6.40 278.9 28 16.0 15.8 10.3735 3.545857 42.7 64.9 2.824 0.0 31.9825 5.67 246.9 24 17.0 16.8 10.1185 3.530548 44.7 73.1 1.937 0.0 32.0548 5.29 230.6 23 18.0 17.9 9.8305 3.515198 44.4 72.0 1.405 0.0 32.1535 5.06 220.6 19 19.0 18.9 9.5679 3.500330 46.5 76.0 1.129 0.0 32.2380 4.91 213.9 25 20.0 19.8 9.5000 3.496111 46.6 76.7 0.945 0.0 32.2555 4.80 209.2 27 21.0 20.8 9.4702 3.494512 46.6 77.3 0.798 0.0 32.2654 4.73 206.2 27 22.0 21.8 9.4479 3.493483 46.5 77.4 0.839 0.0 32.2745 4.69 204.2 27 23.0 22.8 9.4417 3.493484 46.7 77.2 1.498 0.0 32.2797 4.65 202.7 26 24.0 23.8 9.4045 3.491853 46.6 77.4 0.850 0.0 32.2974 4.62 201.2 20 25.0 24.8 9.3963 3.491786 46.5 77.3 0.765 0.0 32.3023 4.60 200.3 23 26.0 25.8 9.3945 3.491858 46.5 77.0 0.704 0.0 32.3043 4.58 199.6 20 27.0 26.8 9.3907 3.491947 46.6 76.7 0.655 0.0 32.3082 4.57 199.0 20 28.0 27.8 9.3833 3.492442 46.6 76.7 0.627 0.0 32.3195 4.56 198.7 24 29.0 28.8 9.3789 3.493658 46.8 77.2 0.576 0.0 32.3355 4.54 197.7 34 30.0 29.7 9.3245 3.493829 47.0 77.4 0.524 0.0 32.3861 4.48 194.9 29 31.0 30.7 9.2342 3.491449 47.1 78.0 0.541 0.0 32.4430 4.43 192.8 21 32.0 31.7 9.2139 3.490397 46.9 77.6 0.499 0.0 32.4501 4.39 191.0 21 33.0 32.8 9.1973 3.489806 46.8 77.4 0.494 0.0 32.4586 4.35 189.5 25 34.0 33.7 9.1636 3.488595 46.8 77.3 0.513 0.0 32.4764 4.31 187.7 30 35.0 34.7 9.1145 3.486001 46.5 77.4 0.507 0.0 32.4939 4.25 185.2 29 36.0 35.7 9.0487 3.481854 46.3 76.9 0.458 0.0 32.5105 4.21 183.1 23 37.0 36.7 9.0025 3.479776 46.3 77.0 0.606 0.0 32.5308 4.17 181.7 20 38.0 37.7 8.9426 3.479638 46.5 76.6 0.500 0.0 32.5837 4.16 181.1 22 39.0 38.7 8.9170 3.479541 46.7 76.9 0.434 0.0 32.6057 4.17 181.6 24 40.0 39.7 8.9040 3.480778 47.1 77.3 0.383 0.0 32.6301 4.19 182.3 24 41.0 40.7 8.8915 3.482314 47.7 78.0 0.378 0.0 32.6572 4.18 182.0 26 42.0 41.6 8.8636 3.481573 47.6 78.7 0.355 0.0 32.6747 4.13 179.9 25 43.0 42.6 8.7915 3.479342 47.4 78.7 0.326 0.0 32.7174 4.05 176.5 24 44.0 43.6 8.7048 3.478054 46.6 78.9 0.321 0.0 32.7836 3.96 172.5 25 45.0 44.6 8.6260 3.475330 46.2 78.2 0.304 0.0 32.8277 3.85 167.7 26 46.0 45.6 8.5388 3.471972 45.3 77.2 0.282 0.0 32.8730 3.77 164.1 25 47.0 46.6 8.5146 3.470984 44.8 75.1 0.272 0.0 32.8848 3.71 161.6 23 48.0 47.6 8.5013 3.470646 44.5 74.4 0.263 0.0 32.8932 3.67 159.8 23 49.0 48.6 8.4783 3.470920 44.1 73.4 0.259 0.0 32.9170 3.64 158.3 23 50.0 49.6 8.4668 3.471223 43.8 72.4 0.262 0.0 32.9305 3.61 157.3 25 51.0 50.6 8.4663 3.471299 43.6 71.5 0.265 0.0 32.9314 3.60 156.7 23 52.0 51.5 8.4662 3.471387 43.6 71.3 0.260 0.0 32.9319 3.59 156.4 25 53.0 52.5 8.4651 3.471488 43.5 71.3 0.256 0.0 32.9335 3.59 156.4 23 54.0 53.5 8.4648 3.471570 43.3 70.4 0.256 0.0 32.9342 3.59 156.2 24 55.0 54.6 8.4649 3.471657 43.1 70.8 0.267 0.0 32.9346 3.59 156.1 22 56.0 55.5 8.4649 3.471737 43.2 70.5 0.254 0.0 32.9350 3.58 156.0 39 56.8 56.4 8.4649 3.471809 43.2 70.5 0.255 0.0 32.9353 3.58 155.8 28