*2021/01/20 08:37:04.74 *IOS HEADER VERSION 2.0 2016/04/28 2016/06/13 IVF16 *FILE START TIME : UTC 2019/05/29 20:50:52.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 36 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 2C288ECA NUMBER OF CHANNELS : 12 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 3.1 38.2 2 Depth metres 3 37.8 3 Temperature:Primary 'deg C (ITS90)' 8.8422 13.8624 4 Conductivity:Primary S/m 3.460762 3.820107 5 Transmissivity %/metre 23.6 49.3 6 Transmissivity:Green %/metre 39.28654 82.33656 7 Fluorescence:URU:Seapoint mg/m^3 0.262 6.384 8 PAR uE/m^2/sec 2 526.6 9 Salinity:T0:C0 PSS-78 31.6541 32.5519 10 Oxygen:Dissolved:SBE mL/L 3.91 8.19 11 Oxygen:Dissolved:SBE umol/kg 170.3 356.9 12 Number_of_bin_records n/a 19 44 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 10 F ' ' 6 5 -99 ' ' 6 F ' ' 1 6 -99 ' ' 6 F ' ' 1 7 -99 ' ' 8 F ' ' 3 8 -99 ' ' 7 F ' ' 1 9 -99 ' ' 9 F ' ' 4 10 -99 ' ' 7 F ' ' 2 11 -99 ' ' 6 F ' ' 1 12 -99 ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: Q:\OSD_DataProcessing\Cruise_Data\2019-005\Processing\derive\2019-005-0131.cnv $END *ADMINISTRATION MISSION : 2019-005 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : La Perouse SCIENTIST : Robert M. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : WCVI STATION : LD03 EVENT NUMBER : 131 LATITUDE : 48 56.43000 N ! (deg min) LONGITUDE : 125 50.81000 W ! (deg min) WATER DEPTH : 44.5 ALTIMETER (M) : 9.82 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0506 $REMARKS Software Version Seasave V 7.26.7.107 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 4.2.2 2019/10/01 10:02:39 3329 3329 CLEAN 5.2.3 2019/10/01 10:26:33 3329 3329 MERGEHDR 1.3 2019/10/01 11:17:28 3329 3329 SHIFTDAT 3.4 2019/10/01 15:11:35 3329 3329 SHIFTDAT 3.4 2019/10/01 16:26:22 3329 3329 SHIFTDAT 3.4 2019/10/01 17:07:39 3329 3329 DELETE 6.3 2019/10/02 07:56:53 3329 1023 CTDEDIT 5.2.3 2019/10/03 14:42:26 1023 927 CALIB 12.0 2019/10/04 15:21:13 927 927 FILTERS 4.3 2019/10/04 15:25:19 927 927 BINAVE 4.2 2019/10/07 09:47:14 927 36 REMOVECH 8.2 2019/10/07 10:29:39 36 36 CHGUNITS 3.1.1 2019/10/07 10:36:24 36 36 REORDER 1.3.1 2019/10/07 11:12:15 ? ? HDREDIT2 3.1.1 2019/10/22 08:49:25 ? ? HDREDIT2 3.2 2020/12/10 10:59:26 ? ? REORDER 1.3.1 2020/12/10 11:02:52 ? ? HDREDIT2 3.2 2020/12/10 11:07:44 ? ? HDREDIT2 3.2 2020/12/10 11:08:50 ? ? CALIB 12.0.1 2021/01/20 08:37:04 36 36 $END $REMARKS -CLEAN functions: 2019/10/01 10:21:24 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.70 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.70 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 28.44 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.2.3 2019/10/03 14:42:26 96 records were deleted in this editing session. 2 changes in channel Salinity:T0:C0 -CALIB parameters: 2019/10/04 15:21:13 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\OSD_DataProcessing\Cruise_Data\2019-005\Processing\doc\2019-005-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 16 Salinity:T0:C0 PSS-78 10 0.2300000E-02 0.1000000E+01 18 Oxygen:Dissolved:SBE mL/L 10 0.2260000E-01 0.1030000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2019/10/07 10:29:39 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Altimeter [metres] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: Temperature reference channel: Temperature:Primary Salinity reference channel: Salinity:T0:C0 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg -HEADER EDITS: 2019/10/22 08:49:25 Applied edit header: Q:\OSD_DataProcessing\Cruise_Data\2019-005\Processing\doc\2019-005-HDR.TXT Channel 4: Transmissivity [%/metre] Format: F8.3 ==> F6.1 Channel 7: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 9: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 12: Number_of_bin_records [n/a] Pad: ' ' ==> -99 Channel 11: Conductivity:Primary [S/m] Format: F11.6 ==> F10.6 Channel 5: Transmissivity2 [%/metre] Name: Transmissivity:2 ==> Transmissivity2 -HEADER EDITS: 2020/12/10 10:59:26 Channel 4: Transmissivity:Green [%/metre] Name: Transmissivity ==> Transmissivity:Green Channel 5: Transmissivity [%/metre] Name: Transmissivity2 ==> Transmissivity -HEADER EDITS: 2020/12/10 11:07:44 -HEADER EDITS: 2020/12/10 11:08:50 Applied edit header: C:\Users\Samantha\OneDrive\Documents\SH ios\HPLC\2019\2019-005-transmissivity\ 2019-005-trms-hdr1.txt -CALIB parameters: 2021/01/20 08:37:04 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = 2019-005-transcor.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 6 Transmissivity:Green %/metre 10 -0.2000000E-01 0.1439800E+01 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\CTD Data\2019-005\2019-005-0131.hex Software Version Seasave V 7.26.7.107 Temperature SN = 2023 Conductivity SN = 1763 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = May 29 2019 20:59:15 NMEA Latitude = 48 56.43 N NMEA Longitude = 125 50.81 W NMEA UTC (Time) = May 29 2019 20:50:52 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Tully: 2019-005 Station: LD03 Depth: 40 System UTC = May 29 2019 20:59:15 # nquan = 19 # nvalues = 3329 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = depSM: Depth [salt water, m] # name 3 = t090C: Temperature [ITS-90, deg C] # name 4 = t190C: Temperature, 2 [ITS-90, deg C] # name 5 = c0S/m: Conductivity [S/m] # name 6 = c1S/m: Conductivity, 2 [S/m] # name 7 = CStarTr0: Beam Transmission, WET Labs C-Star [%] # name 8 = CStarTr1: Beam Transmission, WET Labs C-Star, 2 [%] # name 9 = flSP: Fluorescence, Seapoint # name 10 = sbeox0V: Oxygen raw, SBE 43 [V] # name 11 = par: PAR/Irradiance, Biospherical/Licor # name 12 = altM: Altimeter [m] # name 13 = dz/dtM: Descent Rate [m/s] # name 14 = pumps: Pump Status # name 15 = sal00: Salinity, Practical [PSU] # name 16 = sal11: Salinity, Practical, 2 [PSU] # name 17 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 18 = flag: flag # span 0 = 1, 3329 # span 1 = 2.333, 38.441 # span 2 = 2.313, 38.112 # span 3 = 8.7013, 13.8804 # span 4 = 8.6880, 13.8908 # span 5 = 3.459799, 3.821646 # span 6 = 3.460382, 3.822652 # span 7 = 71.0784, 87.0803 # span 8 = 68.0552, 83.9335 # span 9 = 2.1978e-01, 7.0940e+00 # span 10 = 1.5944, 2.9670 # span 11 = 1.9625e+00, 6.7422e+02 # span 12 = 8.91, 44.64 # span 13 = -1.143, 1.136 # span 14 = 0, 1 # span 15 = 31.5813, 32.6427 # span 16 = 31.5431, 32.6560 # span 17 = 3.6589, 8.0062 # span 18 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = May 29 2019 20:50:52 [NMEA time, header] # bad_flag = -9.990e-29 # datcnv_date = Sep 04 2019 11:08:19, 7.26.7.129 [datcnv_vars = 15] # datcnv_in = Q:\OSD_DataProcessing\Cruise_Data\2019-005\Unprocessed\CTD\2019-00 5-0131.hex Q:\OSD_DataProcessing\Cruise_Data\2019-005\Processing\doc\2019-005-ctd.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Sep 04 2019 11:22:29, 7.26.7.129 # wildedit_in = Q:\OSD_DataProcessing\Cruise_Data\2019-005\Processing\convert\20 19-005-0131.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM depSM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Oct 01 2019 09:27:46, 7.26.7.129 # alignctd_in = Q:\OSD_DataProcessing\Cruise_Data\2019-005\Processing\wildedit\2 019-005-0131.cnv # alignctd_adv = sbeox0V 2.500 # celltm_date = Oct 01 2019 09:36:03, 7.26.7.129 # celltm_in = Q:\OSD_DataProcessing\Cruise_Data\2019-005\Processing\align\2019-0 05-0131.cnv # celltm_alpha = 0.0245, 0.0245 # celltm_tau = 9.5000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Oct 01 2019 09:54:42, 7.26.7.129 [derive_vars = 3] # Derive_in = Q:\OSD_DataProcessing\Cruise_Data\2019-005\Processing\celltm\2019- 005-0131.cnv Q:\OSD_DataProcessing\Cruise_Data\2019-005\Processing\doc\2019-005-ctd.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some near-surface records and records corrupted by shed wakes near the bottom of the cast; salinity was cleaned lightly. -------------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Conductivity, Transmissivity, Fluorescence and PAR data are nominal and unedited except that some records were removed in editing temperature and salinity. There were 2 WetLabs CStar transmissometers in use during this cruise: Channel Transmissometer refers to sensor #1185DR (650nm - red) Channel Transmissometer:Green refers to sensor #1883DG (530nm - green) For comparison with other Institute of Ocean Sciences cruises, note that the transmissometer wavelength is 650nm unless otherwise stated. NOTE: While the CTD fluorescence data are expressed in concentration units, they do not always compare well to extracted chlorophyll samples, particularly for casts far from shore. It is recommended that users check extracted chlorophyll values where available. Dissolved oxygen was calibrated using the method described in SeaBird Application Note #64-2, June 2012 revision, except that a small offset in the fit was allowed. The SBE DO sensor has a fairly long response time so data accuracy is not as high when it is in motion as it is during stops for bottles. This will be especially true when vertical DO gradients are large. To get an estimate of the accuracy of the SBE DO data during downcasts (after recalibration)a rough comparison was made between downcast SBE DO and upcast titrated samples. Some of the difference will be due to problems with flushing of Niskin bottles and/or analysis errors, so the following statement likely underestimates SBE DO accuracy. Downcast (CTD files) Oxygen:Dissolved:SBE data for are considered, very roughly, to be: ±0.5 mL/L from 0 to 50db ±0.3 mL/L from 50db to 250db ±0.10 mL/L from 250db to 500db ±0.02 mL/L below 500db For details on the CTD data processing see document: 2019-005_Processing_Report.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- --------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (0.23E-02 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (0.226E-01 1.03) Transmissivity:Green %/metre 10 -99 () (-0.2E-01 1.4398) $END !--1--- --2--- ---3---- ----4---- --5-- --6-- ---7--- --8--- ---9---- --10-- --11- -12- !Pressu Depth Temperat Conductiv Trans Trans Fluores PAR Salinity Oxygen Oxyge Numb !re ure: ity: missi missi cence: :T0:C0 : n: er_o ! Primary Primary vity vity: URU: Dissol Disso ~bin ! Green Seapoin ved: lved: _rec ! t SBE SBE ords !------ ------ -------- --------- ----- ----- ------- ------ -------- ------ ----- ---- *END OF HEADER 3.1 3.0 13.8624 3.820107 28.8 46.8 0.802 526.6 31.6541 7.60 331.4 35 4.0 3.9 13.8589 3.819976 28.5 46.8 0.867 443.7 31.6554 7.59 331.2 21 5.0 5.0 13.8488 3.819365 28.5 46.9 0.935 353.5 31.6577 7.58 330.4 23 6.0 5.9 13.7770 3.813809 27.8 46.9 1.100 283.7 31.6636 7.61 331.8 19 7.0 6.9 13.5678 3.797018 27.6 45.8 1.306 228.8 31.6824 7.83 341.5 27 8.0 7.9 12.9364 3.747361 27.4 44.9 1.505 191.0 31.7438 8.15 355.4 30 9.0 8.9 12.8034 3.736504 28.0 45.6 1.750 157.5 31.7527 8.19 356.9 27 10.0 9.9 12.7898 3.735304 27.7 45.9 1.886 130.6 31.7523 8.09 352.8 23 11.0 10.9 12.5997 3.720102 27.6 45.9 2.238 105.9 31.7680 7.87 343.0 24 12.0 11.9 12.2164 3.686319 28.3 46.5 2.943 87.2 31.7695 7.53 328.2 24 13.0 12.9 11.8123 3.656758 28.6 46.5 3.530 71.9 31.8289 7.24 315.6 26 14.0 13.9 11.6662 3.644749 28.2 46.1 4.387 58.8 31.8372 6.94 302.4 27 15.0 14.9 11.3969 3.627482 23.6 44.5 6.384 46.9 31.9004 6.61 288.1 25 16.0 15.9 11.1855 3.615430 24.0 40.2 5.043 36.6 31.9649 6.29 274.3 23 17.0 16.9 10.8592 3.595216 36.7 39.3 2.724 28.0 32.0493 6.07 264.5 21 18.0 17.8 10.7464 3.588310 42.8 49.9 1.916 20.7 32.0792 5.90 257.0 22 19.0 18.8 10.6410 3.581957 44.0 62.8 1.381 16.1 32.1081 5.73 249.6 25 20.0 19.8 10.3927 3.564054 47.3 70.4 0.841 13.6 32.1478 5.59 243.6 27 21.0 20.8 10.2103 3.550071 48.4 76.0 0.688 11.8 32.1684 5.50 239.6 27 22.0 21.8 10.1788 3.547730 48.9 79.2 0.624 10.3 32.1723 5.43 236.6 26 23.0 22.8 10.1382 3.544743 49.3 79.9 0.516 9.0 32.1779 5.36 233.3 26 24.0 23.8 10.0844 3.540496 49.2 80.8 0.464 8.1 32.1824 5.26 229.0 23 25.0 24.8 9.9691 3.532431 49.1 82.3 0.478 7.3 32.2031 5.13 223.4 23 26.0 25.8 9.8629 3.524764 49.3 79.9 0.517 6.7 32.2197 4.96 215.9 23 27.0 26.8 9.6477 3.506006 48.9 81.6 0.412 6.1 32.2208 4.75 206.8 26 28.0 27.8 9.4459 3.488747 48.6 80.8 0.384 5.5 32.2251 4.61 200.6 26 29.0 28.8 9.4195 3.487738 48.4 79.9 0.358 5.0 32.2381 4.55 198.1 24 30.0 29.7 9.3973 3.487962 48.3 80.0 0.326 4.6 32.2599 4.51 196.6 24 31.0 30.7 9.3782 3.487084 48.2 79.6 0.377 4.1 32.2677 4.49 195.7 26 32.0 31.7 9.3566 3.487393 48.0 79.9 0.304 3.7 32.2892 4.49 195.5 24 33.0 32.7 9.3369 3.487478 48.1 79.7 0.293 3.4 32.3082 4.46 194.3 23 34.0 33.7 9.3150 3.488218 48.1 79.6 0.296 3.1 32.3351 4.37 190.4 22 35.0 34.7 9.1522 3.476700 47.5 78.9 0.301 2.8 32.3634 4.22 184.0 23 36.1 35.8 8.9546 3.461915 47.0 78.4 0.262 2.6 32.3894 4.07 177.1 33 37.0 36.7 8.9102 3.460762 45.6 75.1 0.277 2.3 32.4175 3.97 173.0 44 38.2 37.8 8.8422 3.467740 43.0 71.5 0.262 2.0 32.5519 3.91 170.3 24