*2019/04/25 11:14:11.52 *IOS HEADER VERSION 2.0 2016/04/28 2016/06/13 IVF16 *FILE START TIME : UTC 2018/07/24 20:12:24.000 TIME INCREMENT : 0 0 0 0.125 0 ! (day hr min sec ms) NUMBER OF RECORDS : 61 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : FC56FADF NUMBER OF CHANNELS : 10 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 2.437 61.523 2 Depth metres 2.416 60.992 3 Temperature:Primary 'deg C (ITS90)' 8.2293 13.9578 4 Fluorescence:URU:Wetlabs mg/m^3 0.52E-01 16.178 5 pH:SBE:Nominal n/a 8.427 9.095 6 Salinity:T0:C0 PSS-78 31.4661 33.1703 7 Oxygen:Dissolved:SBE mL/L 2.181 7.787 8 Oxygen:Dissolved:SBE umol/kg 94.91689 339.6631 9 Conductivity:Primary S/m 3.47275 3.808441 10 Number_of_bin_records n/a 2 16 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 8 F ' ' 3 6 -99 ' ' 9 F ' ' 4 7 -99 ' ' 7 F ' ' 2 8 -99 ' ' 6 F ' ' 1 9 -99 ' ' 10 F ' ' 6 10 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2018-073\Processing\derive\2018-073-0158.cnv $END *ADMINISTRATION MISSION : 2018-073 AGENCY : PBS, Ecosystem Sciences Division, Nanaimo, B.C. COUNTRY : Canada PROJECT : Intergrated Pelagics Ecosystem Survey SCIENTIST : King J. / Boldt J. PLATFORM : Nordic Pearl *LOCATION GEOGRAPHIC AREA : North & West Coast Vancouver Island STATION : 3702 EVENT NUMBER : 158 LATITUDE : 48 52.33100 N ! (deg min) LONGITUDE : 126 1.90800 W ! (deg min) WATER DEPTH : 76 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-25 SERIAL NUMBER : 404 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2449 Conductivity ' ' 1764 'Pressure:Strain Gauge' ' ' 0464 pH ' ' 0852 'Oxygen:SBE 43' ' ' 1176 'Fluorometer:WET Labs ECO-AFL/FL' ' ' FLRTD-4185 $END $REMARKS Software Version 1.59 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 4.2.2 2019/04/18 10:57:00 3322 3322 CLEAN 5.2.3 2019/04/18 10:57:47 3322 3322 CLIP 1.3 2019/04/18 12:53:43 3322 2003 SHIFTDAT 3.4 2019/04/18 15:06:09 2003 2003 DELETE 6.3 2019/04/18 15:06:49 2003 555 CTDEDIT 5.2.3 2019/04/23 14:31:24 555 517 CALIB 12.0 2019/04/24 13:50:27 517 517 FILTERS 4.3 2019/04/24 13:51:37 517 517 BINAVE 4.2 2019/04/24 13:55:10 517 61 CLEAN 5.2.3 2019/04/24 14:16:37 61 61 REMOVECH 8.2 2019/04/24 14:19:45 61 61 CHGUNITS 3.1.1 2019/04/24 14:20:03 61 61 REORDER 1.3.1 2019/04/24 14:28:41 ? ? HDREDIT2 3.1.1 2019/04/25 11:14:11 ? ? $END $REMARKS -CLEAN functions: 2019/04/18 10:57:33 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure:StrainGauge Set event to last 4 characters of file name -The following CLIP parameters were used. Clip by Record Number Limits First Record,Last Record = 1320,100000 Time Not Available in File -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 10.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure NOT filtered. Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 5 points) will be deleted. Drop rate applies in the range 10.00 to 51.53 dbars Sample interval (from FILE section of header) = 0.125 seconds. -CTDEDIT v5.2.3 2019/04/23 14:31:24 38 records were deleted in this editing session. 26 changes in channel Salinity:T0:C0 -CALIB parameters: 2019/04/24 13:50:27 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2018-073\Processing\doc\2018-073-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 11 Oxygen:Dissolved:SBE mL/L 10 0.0000000E+00 0.1050000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 5 The following channel(s) were filtered. Fluorescence:URU:Wetlabs:ECO-AFL -The following BINAVE parameters were used: Bin channel = Press* Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -CLEAN functions: 2019/04/24 14:16:35 20 Reset #RECS, MIN & MAX values in header. Insert Pad Values in Channel: Fluorescence:URU:Wetlabs:ECO-AFL [mg/m^3] where channel Fluorescence:URU:Wetlabs:ECO-AFL [mg/m^3] is in the range -100 376 data records in pad range. Set event to last 4 characters of file name -REMOVECH 2019/04/24 14:19:45 The following CHANNEL(S) were removed: Scan_Number Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Flag -CHANGE units: Temperature reference channel: Temperature:Primary Salinity reference channel: Salinity:T0:C0 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2019/04/25 11:14:11 Applied edit header: P:\Cruise_Data_Processing\2018-073\Processing\doc\2018-073-HDR.TXT Channel 1: Pressure [decibar] Name: Pressure:StrainGauge ==> Pressure Format: F10.3 ==> F7.1 Channel 2: Depth [metres] Name: Depth:Salt_Water ==> Depth Format: F10.3 ==> F7.1 Channel 4: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:URU:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 7: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 5: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a Channel 9: Conductivity:Primary [S/m] Format: F11.6 ==> F10.6 $END *COMMENTS SBE HEADER Sea-Bird SBE25 Data File: FileName = C:\Users\WP-SBE25\Desktop\2018-73\2018-73 second leg CTD files\2018 -73-0158.hex Software Version 1.59 Temperature SN = 2449 Conductivity SN = 1764 System UpLoad Time = Jul 24 2018 23:28:33 Latitude:48 52.331 N Longitude:126 01.908 W Station:3702 Depth:76 m Event:158 ds SBE 25 CTD V 4.1c SN 0404 07/24/18 23:28:00.941 external pressure sensor, range = 10153 psia, tcval = 37 xtal = 9437232 clk = 32767.974 vmain = 11.6 iop = 214 vlith = 5.2 ncasts = 16 samples = 76667 free = 568306 lwait = 0 msec CTD configuration: number of scans averaged = 1, data stored at 8 scans per second real time data transmitted at 8 scans per second minimum conductivity frequency for pump turn on = 3100 pump delay = 45 seconds battery type = ALKALINE 3 external voltages sampled stored voltage # 0 = external voltage 0 stored voltage # 1 = external voltage 4 stored voltage # 2 = external voltage 5 S> dh cast 15 07/24 20:12:24 smpls 73345 to 76666 nv = 3 avg = 1 stp = switch o f S> # nquan = 12 # nvalues = 3322 # units = specified # name 0 = scan: Scan Count # name 1 = prSM: Pressure, Strain Gauge [db] # name 2 = depSM: Depth [salt water, m], lat = 49.00 # name 3 = t090C: Temperature [ITS-90, deg C] # name 4 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 5 = sbeox0V: Oxygen raw, SBE 43 [V] # name 6 = c0S/m: Conductivity [S/m] # name 7 = ph: pH # name 8 = dz/dtM: Descent Rate [m/s] # name 9 = sal00: Salinity, Practical [PSU] # name 10 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 1 # name 11 = flag: flag # span 0 = 1, 3322 # span 1 = -0.076, 61.533 # span 2 = -0.075, 61.001 # span 3 = 8.2288, 14.0292 # span 4 = -0.3120, 45.8309 # span 5 = 0.0000, 2.6239 # span 6 = 0.100733, 3.814738 # span 7 = 4.620, 9.097 # span 8 = -1.812, 1.719 # span 9 = 0.6523, 33.1707 # span 10 = -2.2967, 30.3931 # span 11 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.125 # start_time = Jul 24 2018 20:12:24 [Instrument's time stamp, header] # bad_flag = -9.990e-29 # # # # # 2449 # 16-Dec-15 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35536976e-003 # 6.43861843e-004 # 2.35988525e-005 # 2.27425418e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 23-Feb-17 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15782044e+000 # 4.88269411e-001 # -7.82043110e-004 # 6.18774318e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0464 # 28-Feb-17 # 7.973872e+002 # -2.072374e-001 # 2.547327e-007 # 0.00000 # # # # # # 0852 # 08-Mar-17 # 4.5991 # 2.5690 # # # # # # 1176 # 02-Mar-17 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 6.1597e-001 # -0.5257 # -4.5701e-003 # 2.1508e-004 # -3.4602e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.6700 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # FLRTD-4185 # 07-Mar-2017 # 1.30000000e+001 # # 0.0240 # # # # datcnv_date = Apr 18 2019 10:44:56, 7.26.7.129 [datcnv_vars = 9] # datcnv_in = P:\Cruise_Data_Processing\2018-073\RAW\CTD\Corrected Hex Files\201 8-073-0158.hex P:\Cruise_Data_Processing\2018-073\Processing\doc\2018-073-ctd.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wfilter_date = Apr 18 2019 10:46:38, 7.26.7.129 # wfilter_in = P:\Cruise_Data_Processing\2018-073\Processing\convert\2018-073-01 58.cnv # wfilter_excl_bad_scans = yes # wfilter_action prSM = cosine, 5 # wfilter_action depSM = cosine, 5 # wfilter_action t090C = cosine, 5 # wfilter_action c0S/m = cosine, 5 # alignctd_date = Apr 18 2019 10:47:18, 7.26.7.129 # alignctd_in = P:\Cruise_Data_Processing\2018-073\Processing\wfilter\2018-073-0 158.cnv # alignctd_adv = sbeox0V 2.500 # celltm_date = Apr 18 2019 10:47:52, 7.26.7.129 # celltm_in = P:\Cruise_Data_Processing\2018-073\Processing\align\2018-073-0158. cnv # celltm_alpha = 0.0400, 0.0000 # celltm_tau = 8.0000, 0.0000 # celltm_temp_sensor_use_for_cond = primary, # Derive_date = Apr 18 2019 10:50:09, 7.26.7.129 [derive_vars = 2] # Derive_in = P:\Cruise_Data_Processing\2018-073\Processing\celltm\2018-073-0158 .cnv P:\Cruise_Data_Processing\2018-073\Processing\doc\2018-073-ctd.xmlcon # derive_time_window_docdt = seconds: 1 # derive_ox_tau_correction = yes # file_type = ascii END* Remarks from CTDEDIT: The descent rate of the CTD was extremely noisy with some complete reversals of direction. CTDEDIT was used to remove some records corrupted by shed wakes; salinity was cleaned. -------------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Conductivity, Fluorescence:URU:Wetlabs and pH:SBE data are nominal and unedited except that some records were removed in editing temperature and salinity. All salinity sampling from this cruise came from near the surface, where vertical salinity gradients and local variability are expected to be high. As a result there is a high standard deviation in the differences between CTD and bottle salinity. When a few outliers are removed, the comparison with the downcast CTD salinity suggests that the CTD is within 0.005psu of bottles. Previous cruises had limited sampling but also suggested that CTD salinity was within 0.005psu. For more details see document "2018-073-bottle-CTD-comp.xls". There was no dissolved oxygen sampling during this cruise and all other cruises using this equipment since it was last serviced. There was an inter-ship comparison in June 2017 for 1 cast only that suggested that dissolved oxygen values were likely low by up to 4%. A comparison with an SBE911+ cast at the same site during a February 2018 cruise was limited to the top 50m but suggested that dissolved oxygen was reading low by at least 5%. Channel Oxygen:Dissolved:SBE was recalibrated by adding 5% to all values. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. Warning: While the CTD fluorescence data are expressed in concentration units, they do not always compare well to extracted chlorophyll samples. It is recommended that extracted chlorophyll values be used where available. For details on the processing see document: 2018-073_Processing_Report.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0 1.05) $END !--1--- --2--- ---3---- ---4--- ---5--- ---6---- --7--- --8-- ----9---- -10- !Pressu Depth Temperat Fluores pH:SBE: Salinity Oxygen Oxyge Conductiv Numb !re ure: cence: Nominal :T0:C0 : n: ity: er_o ! Primary URU: Dissol Disso Primary ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ ------ -------- ------- ------- -------- ------ ----- --------- ---- *END OF HEADER 2.4 2.4 13.9578 15.601 9.095 31.4661 7.79 339.7 3.808441 2 3.1 3.1 13.9512 15.321 9.094 31.4664 7.77 338.7 3.807907 8 4.1 4.1 13.9384 15.561 9.093 31.4667 7.77 338.9 3.806846 7 5.1 5.0 13.9402 15.652 9.094 31.4669 7.76 338.6 3.807058 8 6.0 5.9 13.9411 16.178 9.092 31.4670 7.61 332.1 3.807176 8 7.1 7.0 13.8004 15.060 9.062 31.4725 7.05 307.5 3.795249 14 8.0 7.9 13.0057 10.637 8.959 31.4928 6.17 269.0 3.727123 9 8.9 8.9 12.4788 5.661 8.888 31.5070 5.52 240.7 3.682117 7 10.0 9.9 12.1017 4.138 8.825 31.5339 5.08 221.6 3.651794 6 11.0 11.0 11.5383 3.310 8.768 31.5827 4.77 207.9 3.607423 5 12.0 11.9 10.8665 1.758 8.715 31.6562 4.49 195.6 3.556167 8 12.9 12.8 10.4840 0.987 8.665 31.7178 4.26 185.7 3.529001 10 13.9 13.8 10.2172 0.704 8.635 31.7650 4.07 177.5 3.510491 7 15.0 14.9 9.9848 0.340 8.608 31.8308 3.94 171.6 3.496809 10 16.0 15.8 9.8506 0.255 8.590 31.8909 3.85 167.8 3.491094 11 17.0 16.9 9.8465 0.307 8.580 31.9010 3.81 165.9 3.491769 5 18.0 17.9 9.8231 0.182 8.574 31.9202 3.75 163.3 3.491665 9 19.1 18.9 9.7730 0.443 8.568 31.9521 3.67 159.9 3.490471 9 20.0 19.8 9.6549 0.212 8.562 32.0267 3.57 155.6 3.487527 9 21.0 20.8 9.5445 0.128 8.556 32.0904 3.49 152.2 3.484154 7 22.0 21.8 9.4627 0.220 8.548 32.1459 3.42 149.2 3.482451 8 23.0 22.8 9.3888 0.126 8.540 32.2031 3.35 146.1 3.481606 9 24.0 23.8 9.3654 0.113 8.536 32.2235 3.31 144.3 3.481589 12 25.0 24.8 9.3575 0.111 8.534 32.2297 3.30 143.8 3.481541 8 26.0 25.8 9.3515 0.089 8.531 32.2359 3.27 142.4 3.481657 8 27.0 26.8 9.3382 0.083 8.532 32.2459 3.24 141.2 3.481509 8 28.0 27.8 9.2789 0.079 8.535 32.2779 3.23 140.6 3.479457 8 29.0 28.7 9.2016 0.087 8.528 32.3280 3.13 136.4 3.477586 7 30.1 29.8 9.1062 0.064 8.504 32.4358 2.99 130.1 3.479669 13 31.0 30.7 9.0597 0.105 8.486 32.4875 2.85 124.0 3.480608 11 32.0 31.7 9.0422 0.081 8.481 32.5045 2.83 123.3 3.480753 8 33.1 32.8 9.0169 0.075 8.484 32.5274 2.83 123.0 3.480782 13 34.0 33.7 8.9937 0.077 8.484 32.5476 2.81 122.4 3.480722 12 35.0 34.7 8.9717 0.071 8.485 32.5651 2.78 121.1 3.480503 8 36.0 35.7 8.8786 0.120 8.486 32.6341 2.76 120.3 3.478965 8 37.0 36.7 8.7717 0.094 8.486 32.7298 2.75 119.6 3.478740 14 38.0 37.7 8.7524 0.083 8.486 32.7477 2.73 118.9 3.478791 11 39.0 38.6 8.7265 0.088 8.486 32.7665 2.71 117.9 3.478344 6 40.0 39.7 8.7076 0.097 8.482 32.7805 2.69 117.2 3.478044 8 41.0 40.7 8.6980 0.072 8.481 32.7935 2.69 117.3 3.478479 12 42.0 41.6 8.6688 0.183 8.481 32.8304 2.66 115.8 3.479466 10 43.0 42.6 8.6274 0.078 8.475 32.8635 2.62 114.2 3.478997 9 44.0 43.6 8.5763 0.077 8.471 32.8994 2.56 111.6 3.477926 8 44.9 44.5 8.5317 0.079 8.464 32.9313 2.50 109.0 3.477047 8 46.0 45.6 8.4847 0.069 8.459 32.9664 2.46 106.9 3.476253 7 47.1 46.7 8.4096 0.080 8.455 33.0257 2.41 104.8 3.475263 7 47.9 47.5 8.3223 0.052 8.449 33.0995 2.35 102.3 3.474526 11 49.0 48.6 8.2819 0.107 8.442 33.1295 2.28 99.4 3.473809 5 50.0 49.6 8.2594 0.186 8.441 33.1438 2.26 98.5 3.473212 5 51.2 50.7 8.2374 0.150 8.438 33.1593 2.26 98.2 3.472750 10 52.0 51.5 8.2345 0.170 8.437 33.1624 2.23 97.3 3.472827 8 53.0 52.5 8.2342 0.138 8.436 33.1632 2.23 97.3 3.472915 6 54.0 53.5 8.2337 0.221 8.435 33.1642 2.22 96.6 3.473011 7 55.0 54.5 8.2314 0.215 8.431 33.1665 2.21 96.4 3.473074 9 56.1 55.6 8.2313 0.259 8.431 33.1672 2.20 95.8 3.473174 6 57.1 56.6 8.2311 0.218 8.431 33.1674 2.21 96.1 3.473225 8 57.9 57.4 8.2306 0.192 8.431 33.1683 2.20 95.8 3.473302 16 59.0 58.5 8.2305 0.194 8.431 33.1686 2.19 95.3 3.473362 7 59.9 59.3 8.2294 0.194 8.431 33.1697 2.20 95.7 3.473411 7 60.9 60.4 8.2293 0.204 8.427 33.1703 2.19 95.3 3.473497 10 61.5 61.0 8.2297 0.220 8.429 33.1702 2.18 94.9 3.473548 2