*2019/04/25 11:14:10.65 *IOS HEADER VERSION 2.0 2016/04/28 2016/06/13 IVF16 *FILE START TIME : UTC 2018/07/15 00:23:04.000 TIME INCREMENT : 0 0 0 0.125 0 ! (day hr min sec ms) NUMBER OF RECORDS : 44 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 7C22F682 NUMBER OF CHANNELS : 10 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 1.134 43.624 2 Depth metres 1.125 43.249 3 Temperature:Primary 'deg C (ITS90)' 8.7619 13.7209 4 Fluorescence:URU:Wetlabs mg/m^3 0.257 10.668 5 pH:SBE:Nominal n/a 8.542 9.134 6 Salinity:T0:C0 PSS-78 31.2203 32.7092 7 Oxygen:Dissolved:SBE mL/L 3.23 8.498 8 Oxygen:Dissolved:SBE umol/kg 140.6298 370.7112 9 Conductivity:Primary S/m 3.475034 3.767214 10 Number_of_bin_records n/a 5 15 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 8 F ' ' 3 6 -99 ' ' 9 F ' ' 4 7 -99 ' ' 7 F ' ' 2 8 -99 ' ' 6 F ' ' 1 9 -99 ' ' 10 F ' ' 6 10 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2018-073\Processing\derive\2018-073-0080.cnv $END *ADMINISTRATION MISSION : 2018-073 AGENCY : PBS, Ecosystem Sciences Division, Nanaimo, B.C. COUNTRY : Canada PROJECT : Intergrated Pelagics Ecosystem Survey SCIENTIST : King J. / Boldt J. PLATFORM : Nordic Pearl *LOCATION GEOGRAPHIC AREA : North & West Coast Vancouver Island STATION : 3954 EVENT NUMBER : 80 LATITUDE : 48 57.45000 N ! (deg min) LONGITUDE : 125 57.56000 W ! (deg min) WATER DEPTH : 53 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-25 SERIAL NUMBER : 404 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2449 Conductivity ' ' 1764 'Pressure:Strain Gauge' ' ' 0464 pH ' ' 0852 'Oxygen:SBE 43' ' ' 1176 'Fluorometer:WET Labs ECO-AFL/FL' ' ' FLRTD-4185 $END $REMARKS Software Version 1.59 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 4.2.2 2019/04/18 10:56:53 3106 3106 CLEAN 5.2.3 2019/04/18 10:57:42 3106 3106 CLIP 1.3 2019/04/18 12:13:30 3106 1532 SHIFTDAT 3.4 2019/04/18 15:06:06 1532 1532 DELETE 6.3 2019/04/18 15:06:47 1532 353 CTDEDIT 5.2.3 2019/04/23 10:54:22 353 340 CALIB 12.0 2019/04/24 13:50:25 340 340 FILTERS 4.3 2019/04/24 13:51:36 340 340 BINAVE 4.2 2019/04/24 13:55:08 340 44 CLEAN 5.2.3 2019/04/24 14:16:36 44 44 REMOVECH 8.2 2019/04/24 14:19:44 44 44 CHGUNITS 3.1.1 2019/04/24 14:20:02 44 44 REORDER 1.3.1 2019/04/24 14:28:40 ? ? HDREDIT2 3.1.1 2019/04/25 11:14:10 ? ? $END $REMARKS -CLEAN functions: 2019/04/18 10:57:33 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure:StrainGauge Set event to last 4 characters of file name -The following CLIP parameters were used. Clip by Record Number Limits First Record,Last Record = 1575,100000 Time Not Available in File -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 10.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure NOT filtered. Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 5 points) will be deleted. Drop rate applies in the range 10.00 to 33.82 dbars Sample interval (from FILE section of header) = 0.125 seconds. -CTDEDIT v5.2.3 2019/04/23 10:54:22 13 records were deleted in this editing session. No data values were changed. -CALIB parameters: 2019/04/24 13:50:25 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2018-073\Processing\doc\2018-073-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 11 Oxygen:Dissolved:SBE mL/L 10 0.0000000E+00 0.1050000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 5 The following channel(s) were filtered. Fluorescence:URU:Wetlabs:ECO-AFL -The following BINAVE parameters were used: Bin channel = Press* Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -CLEAN functions: 2019/04/24 14:16:35 20 Reset #RECS, MIN & MAX values in header. Insert Pad Values in Channel: Fluorescence:URU:Wetlabs:ECO-AFL [mg/m^3] where channel Fluorescence:URU:Wetlabs:ECO-AFL [mg/m^3] is in the range -100 168 data records in pad range. Set event to last 4 characters of file name -REMOVECH 2019/04/24 14:19:44 The following CHANNEL(S) were removed: Scan_Number Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Flag -CHANGE units: Temperature reference channel: Temperature:Primary Salinity reference channel: Salinity:T0:C0 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2019/04/25 11:14:10 Applied edit header: P:\Cruise_Data_Processing\2018-073\Processing\doc\2018-073-HDR.TXT Channel 1: Pressure [decibar] Name: Pressure:StrainGauge ==> Pressure Format: F10.3 ==> F7.1 Channel 2: Depth [metres] Name: Depth:Salt_Water ==> Depth Format: F10.3 ==> F7.1 Channel 4: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:URU:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 7: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 5: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a Channel 9: Conductivity:Primary [S/m] Format: F11.6 ==> F10.6 $END *COMMENTS SBE HEADER Sea-Bird SBE25 Data File: FileName = C:\Users\WP-SBE25\Desktop\2018-03 CTD\2018-73- - Copy005.hex Software Version 1.59 Temperature SN = 2449 Conductivity SN = 1764 System UpLoad Time = Jul 16 2018 22:32:52 Latitude:48 57.45 N Longitude:125 57.56 W Station:3954 Depth:53 m Event:81 ds SBE 25 CTD V 4.1c SN 0404 07/16/18 22:21:44.821 external pressure sensor, range = 10153 psia, tcval = 37 xtal = 9437232 clk = 32768.031 vmain = 12.9 iop = 200 vlith = 5.2 ncasts = 10 samples = 37539 free = 607434 lwait = 0 msec CTD configuration: number of scans averaged = 1, data stored at 8 scans per second real time data transmitted at 8 scans per second minimum conductivity frequency for pump turn on = 3100 pump delay = 45 seconds battery type = ALKALINE 3 external voltages sampled stored voltage # 0 = external voltage 0 stored voltage # 1 = external voltage 4 stored voltage # 2 = external voltage 5 S> dh cast 5 07/15 00:23:04 smpls 18922 to 22027 nv = 3 avg = 1 stp = switch of S> # nquan = 12 # nvalues = 3106 # units = specified # name 0 = scan: Scan Count # name 1 = prSM: Pressure, Strain Gauge [db] # name 2 = depSM: Depth [salt water, m], lat = 49.00 # name 3 = t090C: Temperature [ITS-90, deg C] # name 4 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 5 = sbeox0V: Oxygen raw, SBE 43 [V] # name 6 = c0S/m: Conductivity [S/m] # name 7 = ph: pH # name 8 = dz/dtM: Descent Rate [m/s] # name 9 = sal00: Salinity, Practical [PSU] # name 10 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 1 # name 11 = flag: flag # span 0 = 1, 3106 # span 1 = -0.217, 43.822 # span 2 = -0.216, 43.446 # span 3 = 8.7591, 13.9281 # span 4 = -0.3120, 27.5610 # span 5 = 0.0000, 2.7998 # span 6 = 0.059246, 3.776126 # span 7 = 8.269, 9.141 # span 8 = -1.888, 1.624 # span 9 = 0.3715, 32.7129 # span 10 = -2.2751, 28.3191 # span 11 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.125 # start_time = Jul 15 2018 00:23:04 [Instrument's time stamp, header] # bad_flag = -9.990e-29 # # # # # 2449 # 16-Dec-15 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35536976e-003 # 6.43861843e-004 # 2.35988525e-005 # 2.27425418e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 23-Feb-17 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15782044e+000 # 4.88269411e-001 # -7.82043110e-004 # 6.18774318e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0464 # 28-Feb-17 # 7.973872e+002 # -2.072374e-001 # 2.547327e-007 # 0.00000 # # # # # # 0852 # 08-Mar-17 # 4.5991 # 2.5690 # # # # # # 1176 # 02-Mar-17 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 6.1597e-001 # -0.5257 # -4.5701e-003 # 2.1508e-004 # -3.4602e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.6700 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # FLRTD-4185 # 07-Mar-2017 # 1.30000000e+001 # # 0.0240 # # # # datcnv_date = Apr 18 2019 10:44:36, 7.26.7.129 [datcnv_vars = 9] # datcnv_in = P:\Cruise_Data_Processing\2018-073\RAW\CTD\Corrected Hex Files\201 8-073-0080.hex P:\Cruise_Data_Processing\2018-073\Processing\doc\2018-073-ctd.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wfilter_date = Apr 18 2019 10:46:35, 7.26.7.129 # wfilter_in = P:\Cruise_Data_Processing\2018-073\Processing\convert\2018-073-00 80.cnv # wfilter_excl_bad_scans = yes # wfilter_action prSM = cosine, 5 # wfilter_action depSM = cosine, 5 # wfilter_action t090C = cosine, 5 # wfilter_action c0S/m = cosine, 5 # alignctd_date = Apr 18 2019 10:47:12, 7.26.7.129 # alignctd_in = P:\Cruise_Data_Processing\2018-073\Processing\wfilter\2018-073-0 080.cnv # alignctd_adv = sbeox0V 2.500 # celltm_date = Apr 18 2019 10:47:46, 7.26.7.129 # celltm_in = P:\Cruise_Data_Processing\2018-073\Processing\align\2018-073-0080. cnv # celltm_alpha = 0.0400, 0.0000 # celltm_tau = 8.0000, 0.0000 # celltm_temp_sensor_use_for_cond = primary, # Derive_date = Apr 18 2019 10:50:01, 7.26.7.129 [derive_vars = 2] # Derive_in = P:\Cruise_Data_Processing\2018-073\Processing\celltm\2018-073-0080 .cnv P:\Cruise_Data_Processing\2018-073\Processing\doc\2018-073-ctd.xmlcon # derive_time_window_docdt = seconds: 1 # derive_ox_tau_correction = yes # file_type = ascii END* Remarks from CTDEDIT: The descent rate of the CTD was noisy. CTDEDIT was used to remove a few records corrupted by shed wakes. -------------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Conductivity, Fluorescence:URU:Wetlabs and pH:SBE data are nominal and unedited except that some records were removed in editing temperature and salinity. All salinity sampling from this cruise came from near the surface, where vertical salinity gradients and local variability are expected to be high. As a result there is a high standard deviation in the differences between CTD and bottle salinity. When a few outliers are removed, the comparison with the downcast CTD salinity suggests that the CTD is within 0.005psu of bottles. Previous cruises had limited sampling but also suggested that CTD salinity was within 0.005psu. For more details see document "2018-073-bottle-CTD-comp.xls". There was no dissolved oxygen sampling during this cruise and all other cruises using this equipment since it was last serviced. There was an inter-ship comparison in June 2017 for 1 cast only that suggested that dissolved oxygen values were likely low by up to 4%. A comparison with an SBE911+ cast at the same site during a February 2018 cruise was limited to the top 50m but suggested that dissolved oxygen was reading low by at least 5%. Channel Oxygen:Dissolved:SBE was recalibrated by adding 5% to all values. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. Warning: While the CTD fluorescence data are expressed in concentration units, they do not always compare well to extracted chlorophyll samples. It is recommended that extracted chlorophyll values be used where available. For details on the processing see document: 2018-073_Processing_Report.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0 1.05) $END !--1--- --2--- ---3---- ---4--- ---5--- ---6---- --7--- --8-- ----9---- -10- !Pressu Depth Temperat Fluores pH:SBE: Salinity Oxygen Oxyge Conductiv Numb !re ure: cence: Nominal :T0:C0 : n: ity: er_o ! Primary URU: Dissol Disso Primary ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ ------ -------- ------- ------- -------- ------ ----- --------- ---- *END OF HEADER 1.1 1.1 13.7209 9.259 9.134 31.2804 8.46 369.2 3.767214 10 2.0 2.0 13.7019 7.980 9.132 31.2746 8.50 370.7 3.764939 15 3.0 2.9 13.6990 8.933 9.131 31.2739 8.48 370.1 3.764640 12 4.0 4.0 13.7158 8.643 9.132 31.2775 8.47 369.4 3.766562 11 5.0 4.9 13.7027 10.668 9.129 31.2742 8.45 368.7 3.765093 8 6.0 5.9 13.6694 10.148 9.123 31.2709 8.43 367.7 3.761829 7 7.0 7.0 13.6563 8.922 9.120 31.2670 8.33 363.4 3.760296 13 8.1 8.1 13.5222 10.370 9.084 31.2461 7.71 336.5 3.746260 5 8.9 8.9 13.4213 8.328 9.038 31.2329 7.37 321.5 3.735989 6 10.0 9.9 13.0006 6.900 8.985 31.2203 7.01 305.9 3.697715 6 11.1 11.0 12.5473 6.640 8.960 31.2936 6.78 295.7 3.665756 10 12.0 11.9 12.5135 9.233 8.950 31.3780 6.19 270.1 3.671715 11 13.0 12.9 12.4262 8.005 8.857 31.5308 5.28 230.1 3.680132 7 14.0 13.9 11.3402 6.266 8.710 31.7273 4.68 204.1 3.605012 5 15.0 14.9 10.0716 4.315 8.668 31.8972 4.45 193.8 3.510958 6 16.1 15.9 9.9674 1.754 8.656 31.9660 4.35 189.4 3.508709 6 17.1 16.9 9.9570 1.106 8.654 31.9839 4.31 187.7 3.509603 10 17.9 17.7 9.9425 1.320 8.652 32.0059 4.21 183.6 3.510546 12 19.0 18.8 9.8119 1.073 8.634 32.0648 4.09 178.2 3.504960 7 20.0 19.8 9.5807 1.180 8.610 32.1825 3.97 172.8 3.496285 5 21.0 20.8 9.3094 1.201 8.612 32.3085 3.94 171.4 3.484804 6 22.0 21.8 9.3234 0.922 8.618 32.3358 3.90 169.9 3.488729 7 23.0 22.8 9.1884 0.700 8.609 32.4440 3.82 166.5 3.487386 8 24.0 23.8 9.0427 0.692 8.591 32.5071 3.74 162.7 3.480693 7 25.1 24.8 8.9963 0.540 8.590 32.5321 3.69 160.5 3.479067 7 26.0 25.8 8.9856 0.559 8.581 32.5395 3.62 157.9 3.478884 8 27.0 26.7 8.9637 0.587 8.573 32.5429 3.56 155.2 3.477314 8 28.1 27.8 8.9372 0.612 8.569 32.5590 3.50 152.5 3.476579 5 29.0 28.7 8.8927 0.478 8.564 32.5901 3.49 151.9 3.475674 5 30.0 29.8 8.8605 0.341 8.562 32.6125 3.45 150.4 3.475034 7 31.0 30.8 8.8522 0.414 8.563 32.6231 3.44 149.8 3.475361 8 32.0 31.8 8.8472 0.558 8.564 32.6332 3.43 149.4 3.475941 9 33.0 32.7 8.8372 0.365 8.564 32.6441 3.40 148.1 3.476143 9 34.0 33.7 8.8188 0.428 8.556 32.6535 3.38 147.4 3.475463 6 35.0 34.7 8.8149 0.421 8.570 32.6569 3.43 149.3 3.475486 6 36.0 35.7 8.8278 0.307 8.575 32.6667 3.46 150.5 3.477606 5 37.1 36.7 8.8140 0.257 8.570 32.6774 3.43 149.3 3.477457 7 38.0 37.6 8.7939 0.378 8.561 32.6872 3.36 146.4 3.476670 8 39.0 38.6 8.7752 0.330 8.549 32.6970 3.30 143.6 3.475998 7 40.1 39.7 8.7632 0.341 8.545 32.7042 3.27 142.5 3.475663 6 41.0 40.7 8.7640 0.499 8.543 32.7047 3.25 141.7 3.475829 9 41.8 41.5 8.7647 0.498 8.542 32.7052 3.25 141.5 3.475980 5 43.1 42.7 8.7675 0.448 8.542 32.7053 3.24 140.9 3.476280 10 43.6 43.2 8.7619 0.282 8.542 32.7092 3.23 140.6 3.476182 5