*2018/03/29 12:07:59.91 *IOS HEADER VERSION 2.0 2016/04/28 2016/06/13 IVF16 *FILE START TIME : UTC 2017/07/04 13:52:24.000 TIME INCREMENT : 0 0 0 0.125 0 ! (day hr min sec ms) NUMBER OF RECORDS : 78 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 6BB83A66 NUMBER OF CHANNELS : 8 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- ----------------------- --------------- -------------- -------------- 1 Pressure decibar 2.318 78.784 2 Depth metres 2.298 78.101 3 Temperature:Primary 'deg C (ITS90)' 11.1327 11.7588 4 pH:SBE:Nominal n/a 8.492 8.601 5 Salinity:T0:C0 PSS-78 28.601 28.9366 6 Oxygen:Dissolved:SBE mL/L 4.965 5.821 7 Oxygen:Dissolved:SBE umol/kg 216.8727 254.3547 8 Number_of_bin_records n/a 8 15 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2017-52\Processing\derive\2017-52-0177.cnv $END *ADMINISTRATION MISSION : 2017-52 AGENCY : PBS, Ecosystem Sciences Division, Nanaimo, B.C. COUNTRY : Canada PROJECT : Strait of Georgia Juvenile Salmon SCIENTIST : Neville C. PLATFORM : Sea Crest *LOCATION GEOGRAPHIC AREA : Strait of Georgia STATION : SET 101 EVENT NUMBER : 177 LATITUDE : 47 22.04300 N ! (deg min) LONGITUDE : 122 31.99000 W ! (deg min) WATER DEPTH : 89 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE25plus SERIAL NUMBER : 404 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2449 Conductivity ' ' 1764 'Pressure:Strain Gauge' ' ' 0464 pH ' ' 0852 'Oxygen:SBE 43' ' ' 1176 'Fluorometer:WET Labs ECO-AFL/FL' ' ' FLRTD-4185 $END $REMARKS Software Version 1.59 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 4.2.2 2018/03/27 13:25:34 2976 2976 CLEAN 5.2.2 2018/03/27 13:25:57 2976 2976 MERGEHDR 1.3 2018/03/27 13:30:42 2976 2976 CLIP 1.3 2018/03/27 14:59:06 2976 2027 ADTIMCH 4.4 2018/03/27 15:06:20 2027 2027 SHIFTDAT 3.4 2018/03/27 16:02:18 2027 2027 DELETE 6.3 2018/03/27 16:03:20 2027 853 CTDEDIT 5.2.3 2018/03/28 13:28:54 853 812 BINAVE 4.2 2018/03/28 13:47:05 812 78 REMOVECH 8.2 2018/03/28 16:15:24 78 78 CHGUNITS 3.1.1 2018/03/28 16:19:10 78 78 REORDER 1.3.1 2018/03/28 16:22:08 ? ? HDREDIT2 3.1.1 2018/03/29 12:07:59 ? ? $END $REMARKS -CLEAN functions: 2018/03/27 13:25:45 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure:StrainGauge Set event to last 4 characters of file name Set header Start and End times from the data. *FAILED* -The following CLIP parameters were used. Clip by Record Number Limits First Record,Last Record = 950, 50000 Time Not Available in File -The following ADTIMCH parameters were used. Add 7.00 hours to times in header file section -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 10.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure NOT filtered. Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 9 points) will be deleted. Drop rate applies in the range 10.00 to 68.96 dbars Sample interval (from FILE section of header) = 0.125 seconds. -CTDEDIT v5.2.3 2018/03/28 13:28:54 41 records were deleted in this editing session. No data values were changed. -The following BINAVE parameters were used: Bin channel = Press* Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2018/03/28 16:15:24 The following CHANNEL(S) were removed: Scan_Number Conductivity:Primary [S/m] Fluorescence:URU:Wetlabs:ECO-AFL [mg/m^3] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Flag -CHANGE units: Temperature reference channel: Temperature:Primary Salinity reference channel: Salinity:T0:C0 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2018/03/29 12:07:59 Applied edit header: P:\Cruise_Data_Processing\2017-52\Processing\doc\2017-52-HDR.TXT Channel 1: Pressure [decibar] Name: Pressure:StrainGauge ==> Pressure Channel 2: Depth [metres] Name: Depth:Salt_Water ==> Depth Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a $END *COMMENTS SBE HEADER Sea-Bird SBE25 Data File: FileName = C:\Users\WaterProperties-16\Desktop\SOG2017-04IOS2017-52\2017-52-01 0.hex Software Version 1.59 Temperature SN = 2449 Conductivity SN = 1764 System UpLoad Time = Jul 06 2017 15:24:08 2017-52S0G2017-04 ds SBE 25 CTD V 4.1c SN 0404 07/06/17 14:58:44.632 external pressure sensor, range = 10153 psia, tcval = 37 xtal = 9437232 clk = 32768.260 vmain = 11.4 iop = 215 vlith = 5.4 ncasts = 12 samples = 41182 free = 603791 lwait = 0 msec CTD configuration: number of scans averaged = 1, data stored at 8 scans per second real time data transmitted at 8 scans per second minimum conductivity frequency for pump turn on = 3100 pump delay = 45 seconds battery type = ALKALINE 3 external voltages sampled stored voltage # 0 = external voltage 0 stored voltage # 1 = external voltage 4 stored voltage # 2 = external voltage 5 S> dh cast 10 07/04 06:52:24 smpls 35368 to 38343 nv = 3 avg = 1 stp = switch o f S> # nquan = 12 # nvalues = 2976 # units = specified # name 0 = scan: Scan Count # name 1 = prSM: Pressure, Strain Gauge [db] # name 2 = depSM: Depth [salt water, m], lat = 49.00 # name 3 = t090C: Temperature [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 6 = sbeox0V: Oxygen raw, SBE 43 [V] # name 7 = ph: pH # name 8 = dz/dtM: Descent Rate [m/s] # name 9 = sal00: Salinity, Practical [PSU] # name 10 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 11 = flag: flag # span 0 = 1, 2976 # span 1 = -0.283, 78.965 # span 2 = -0.281, 78.280 # span 3 = 11.1302, 12.2251 # span 4 = 0.071630, 3.334196 # span 5 = -0.3120, 41.7515 # span 6 = 0.0000, 2.0830 # span 7 = 4.523, 8.615 # span 8 = -0.907, 1.077 # span 9 = 0.4712, 28.9380 # span 10 = -2.3543, 18.7265 # span 11 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.125 # start_time = Jul 04 2017 06:52:24 [Instrument's time stamp, header] # bad_flag = -9.990e-29 # # # # # 2449 # 16-Dec-15 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35536976e-003 # 6.43861843e-004 # 2.35988525e-005 # 2.27425418e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 23-Feb-17 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15782044e+000 # 4.88269411e-001 # -7.82043110e-004 # 6.18774318e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0464 # 28-Feb-17 # 7.973872e+002 # -2.072374e-001 # 2.547327e-007 # 0.00000 # # # # # # 0852 # 08-Mar-17 # 4.5991 # 2.5690 # # # # # # 1176 # 02-Mar-17 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 6.1597e-001 # -0.5257 # -4.5701e-003 # 2.1508e-004 # -3.4602e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.6700 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # FLRTD-4185 # 07-Mar-2017 # 1.30000000e+001 # # 0.0240 # # # # datcnv_date = Mar 27 2018 08:42:53, 7.23.2 [datcnv_vars = 9] # datcnv_in = P:\Cruise_Data_Processing\2017-52\RAW\CTD\2017-52-0177.hex P:\Crui se_Data_Processing\2017-52\Processing\doc\2017-52-ctd.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wfilter_date = Mar 27 2018 13:13:38, 7.23.2 # wfilter_in = P:\Cruise_Data_Processing\2017-52\Processing\convert\2017-52-0177 .cnv # wfilter_excl_bad_scans = yes # wfilter_action prSM = cosine, 5 # wfilter_action depSM = cosine, 5 # wfilter_action t090C = cosine, 5 # wfilter_action c0S/m = cosine, 5 # alignctd_date = Mar 27 2018 13:14:20, 7.23.2 # alignctd_in = P:\Cruise_Data_Processing\2017-52\Processing\wfilter\2017-52-017 7.cnv # alignctd_adv = sbeox0V 2.500 # celltm_date = Mar 27 2018 13:15:10, 7.23.2 # celltm_in = P:\Cruise_Data_Processing\2017-52\Processing\align\2017-52-0177.cn v # celltm_alpha = 0.0400, 0.0000 # celltm_tau = 8.0000, 0.0000 # celltm_temp_sensor_use_for_cond = primary, # Derive_date = Mar 27 2018 13:24:02, 7.23.2 [derive_vars = 2] # Derive_in = P:\Cruise_Data_Processing\2017-52\Processing\celltm\2017-52-0177.c nv P:\Cruise_Data_Processing\2017-52\Processing\doc\2017-52-ctd.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some records from near the top of the cast;. Data Processing Notes: ---------------------- Dissolved Oxygen and pH:SBE data are nominal and unedited, except that some records were removed in editing temperature and salinity. Channel Fluorescence:URU:Wetlabs was removed from most casts because the protective cap had not been removed. The data that remain are nominal. There was no calibration information available but the sensors had been recalibrated at the factory fairly recently so little drift is expected. Comparison with a cast from another cruise suggest that the salinity values are accurate but that dissolved oxygen values may be low by 2-4%. The length of the surface soaks varied greatly, with many being long enough for the pumps to come on and equilibration of pumped channels to be achieved. For some the soak was too short for equilibration to occur until the CTD had started the downcast. For details on the processing see processing report: 2017-52-Processing_Report.doc. !--1--- --2--- ---3---- ---4--- ---5---- --6--- --7-- -8-- !Pressu Depth Temperat pH:SBE: Salinity Oxygen Oxyge Numb !re ure: Nominal :T0:C0 : n: er_o ! Primary Dissol Disso ~bin ! ved: lved: _rec ! SBE SBE ords !------ ------ -------- ------- -------- ------ ----- ---- *END OF HEADER 2.3 2.3 11.7588 8.601 28.6010 5.82 254.4 11 2.9 2.9 11.7494 8.599 28.6073 5.81 253.8 11 4.2 4.1 11.7319 8.587 28.6185 5.76 251.9 8 5.0 4.9 11.7318 8.587 28.6193 5.76 251.8 12 6.0 5.9 11.7303 8.585 28.6193 5.74 250.7 14 7.0 7.0 11.7251 8.583 28.6206 5.72 250.0 13 8.0 7.9 11.7236 8.583 28.6210 5.71 249.5 12 9.0 8.9 11.7237 8.583 28.6210 5.70 249.2 13 10.0 9.9 11.7230 8.580 28.6212 5.69 248.6 12 10.9 10.9 11.7113 8.578 28.6248 5.67 247.8 13 12.0 11.9 11.6968 8.573 28.6324 5.61 245.0 13 13.0 12.9 11.6601 8.563 28.6512 5.55 242.6 12 14.0 13.9 11.6444 8.561 28.6615 5.53 241.5 13 15.0 14.9 11.6390 8.560 28.6653 5.51 240.7 12 16.0 15.9 11.6189 8.556 28.6755 5.50 240.4 12 17.0 16.9 11.6077 8.555 28.6808 5.50 240.2 11 18.0 17.8 11.6043 8.555 28.6828 5.48 239.5 12 19.0 18.8 11.5981 8.553 28.6872 5.46 238.7 11 20.0 19.8 11.5781 8.551 28.6992 5.43 237.3 13 21.0 20.8 11.5421 8.546 28.7202 5.40 236.0 11 22.0 21.8 11.5290 8.542 28.7295 5.37 234.7 12 23.0 22.8 11.5209 8.537 28.7358 5.34 233.4 12 24.0 23.8 11.5026 8.534 28.7470 5.29 231.1 11 25.0 24.8 11.4210 8.526 28.7888 5.25 229.5 12 26.0 25.8 11.3936 8.523 28.8024 5.24 229.1 11 27.0 26.8 11.3920 8.523 28.8035 5.24 229.0 11 28.0 27.8 11.3937 8.523 28.8030 5.24 229.0 12 29.0 28.7 11.3936 8.524 28.8034 5.24 228.8 10 30.0 29.8 11.3824 8.521 28.8105 5.20 227.2 12 31.0 30.8 11.3676 8.515 28.8234 5.18 226.4 11 32.0 31.7 11.3705 8.514 28.8243 5.19 226.7 9 33.0 32.7 11.3727 8.517 28.8242 5.20 226.9 10 34.0 33.7 11.3760 8.517 28.8201 5.19 226.9 9 34.9 34.6 11.3638 8.516 28.8285 5.18 226.5 9 36.0 35.7 11.3795 8.514 28.8254 5.17 226.0 10 37.0 36.7 11.3731 8.518 28.8258 5.19 226.7 9 38.0 37.6 11.3702 8.520 28.8207 5.19 226.9 9 39.0 38.7 11.3672 8.521 28.8222 5.19 226.8 9 40.0 39.7 11.3678 8.523 28.8222 5.19 226.8 9 41.0 40.6 11.3626 8.521 28.8248 5.19 226.6 9 42.0 41.6 11.3557 8.522 28.8281 5.20 227.0 9 43.0 42.6 11.3565 8.523 28.8277 5.19 226.7 10 44.0 43.6 11.3680 8.523 28.8228 5.19 226.6 9 45.0 44.6 11.3631 8.524 28.8251 5.19 226.7 9 46.0 45.6 11.3613 8.524 28.8258 5.18 226.3 9 47.0 46.6 11.3525 8.522 28.8301 5.16 225.2 9 48.0 47.6 11.3155 8.519 28.8492 5.14 224.5 9 49.0 48.5 11.2988 8.516 28.8586 5.12 223.5 9 50.0 49.6 11.2948 8.515 28.8625 5.11 223.4 10 51.0 50.6 11.2915 8.515 28.8644 5.11 223.2 9 52.1 51.6 11.2911 8.514 28.8644 5.11 223.4 9 53.0 52.6 11.2881 8.515 28.8663 5.10 222.9 9 54.1 53.6 11.2869 8.514 28.8675 5.10 222.8 8 55.0 54.5 11.2838 8.513 28.8692 5.10 222.6 8 56.0 55.5 11.2830 8.512 28.8701 5.08 221.9 8 57.0 56.5 11.2697 8.510 28.8781 5.07 221.3 8 58.0 57.5 11.2558 8.509 28.8847 5.07 221.4 9 59.0 58.5 11.2462 8.509 28.8890 5.07 221.5 8 60.0 59.5 11.2582 8.509 28.8832 5.07 221.4 8 61.0 60.5 11.2549 8.510 28.8854 5.07 221.3 9 62.0 61.5 11.2632 8.509 28.8811 5.06 221.0 9 63.0 62.5 11.2383 8.506 28.8935 5.05 220.4 9 64.0 63.5 11.2310 8.506 28.8974 5.04 220.3 9 65.0 64.4 11.2343 8.505 28.8946 5.03 219.7 8 66.0 65.4 11.2150 8.502 28.9011 5.02 219.3 9 67.0 66.4 11.1789 8.501 28.9127 5.00 218.5 8 68.0 67.4 11.1675 8.497 28.9202 4.98 217.5 9 69.0 68.4 11.1411 8.497 28.9309 4.97 217.3 9 70.0 69.4 11.1417 8.497 28.9306 4.98 217.6 8 71.0 70.4 11.1416 8.496 28.9305 4.99 217.7 8 72.0 71.4 11.1380 8.497 28.9323 4.97 217.2 11 73.0 72.3 11.1344 8.494 28.9347 4.97 217.0 12 74.0 73.4 11.1340 8.493 28.9350 4.97 217.2 14 75.0 74.3 11.1327 8.492 28.9365 4.97 217.1 14 76.0 75.3 11.1340 8.492 28.9366 4.96 216.9 14 77.0 76.3 11.1342 8.493 28.9366 4.97 217.2 15 78.0 77.3 11.1393 8.494 28.9336 4.97 217.1 14 78.8 78.1 11.1406 8.494 28.9326 4.97 217.3 11