*2018/04/11 09:25:39.74 *IOS HEADER VERSION 2.0 2016/04/28 2016/06/13 IVF16 *FILE START TIME : UTC 2017/07/26 20:28:13.000 TIME INCREMENT : 0 0 0 0.125 0 ! (day hr min sec ms) NUMBER OF RECORDS : 69 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 1187C8A8 NUMBER OF CHANNELS : 9 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 1.358 68.781 2 Depth metres 1.346 68.187 3 Temperature:Primary 'deg C (ITS90)' 8.5122 13.8191 4 Fluorescence:URU:Wetlabs mg/m^3 0.74E-01 16.348 5 pH:SBE:Nominal n/a 8.397 9.134 6 Salinity:T0:C0 PSS-78 30.9519 32.8397 7 Oxygen:Dissolved:SBE mL/L 2.697 8.839 8 Oxygen:Dissolved:SBE umol/kg 117.4077 385.6885 9 Number_of_bin_records n/a 4 18 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 8 F ' ' 3 6 -99 ' ' 9 F ' ' 4 7 -99 ' ' 7 F ' ' 2 8 -99 ' ' 6 F ' ' 1 9 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2017-42\Processing\derive\2017-42-1037.cnv $END *ADMINISTRATION MISSION : 2017-42 AGENCY : PBS, Ecosystem Sciences Division, Nanaimo, B.C. COUNTRY : Canada PROJECT : Integrated Pelagics Ecosystem Survey SCIENTIST : Boldt J. PLATFORM : Sea Crest *LOCATION GEOGRAPHIC AREA : West Coast Vancouver Island STATION : 3207 EVENT NUMBER : 1037 LATITUDE : 48 42.57000 N ! (deg min) LONGITUDE : 125 46.88700 W ! (deg min) WATER DEPTH : 80 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE25plus SERIAL NUMBER : 404 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2449 Conductivity ' ' 1764 'Pressure:Strain Gauge' ' ' 0464 pH ' ' 0852 'Oxygen:SBE 43' ' ' 1176 'Fluorometer:WET Labs ECO-AFL/FL' ' ' FLRTD-4185 $END $REMARKS Software Version 1.59 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 4.2.2 2018/04/06 14:55:08 1824 1824 MERGEHDR 1.3 2018/04/06 15:17:12 1824 1824 CLIP 1.3 2018/04/06 16:03:51 1824 1425 SHIFTDAT 3.4 2018/04/06 16:15:07 1425 1425 DELETE 6.3 2018/04/06 16:35:38 1425 628 CTDEDIT 5.2.3 2018/04/09 15:19:27 628 585 FILTERS 4.3 2018/04/09 15:52:47 585 585 CALIB 11.9 2018/04/09 15:52:54 585 585 BINAVE 4.2 2018/04/09 15:53:10 585 69 REMOVECH 8.2 2018/04/10 09:02:04 69 69 CHGUNITS 3.1.1 2018/04/10 09:02:09 69 69 REORDER 1.3.1 2018/04/10 09:02:14 ? ? HDREDIT2 3.1.1 2018/04/11 09:25:39 ? ? $END $REMARKS -The following CLIP parameters were used. Clip by Record Number Limits First Record,Last Record = 400, 50000 Time Not Available in File -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 10.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure NOT filtered. Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 9 points) will be deleted. Drop rate applies in the range 10.00 to 58.99 dbars Sample interval (from FILE section of header) = 0.125 seconds. -CTDEDIT v5.2.3 2018/04/09 15:19:27 43 records were deleted in this editing session. No data values were changed. -The following FILTER parameters were used. Median filter was used. Filter width = 5 The following channel(s) were filtered. Fluorescence:URU:Wetlabs:ECO-AFL -CALIB parameters: 2018/04/09 15:52:54 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2017-42\Processing\doc\2017-42-recal1.CCF Calibration limited to records where Fluorescence:URU:Wetlabs:ECO-AFL between: -5 and 0 0 records, in 0 block, were within the limits. 585 records were outside the limits. Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 6 Fluorescence:URU:Wetlabs:ECO- mg/m^3 10 0.0000000E+00 0.0000000E+00 -The following BINAVE parameters were used: Bin channel = Press* Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2018/04/10 09:02:04 The following CHANNEL(S) were removed: Scan_Number Conductivity:Primary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Flag -CHANGE units: Temperature reference channel: Temperature:Primary Salinity reference channel: Salinity:T0:C0 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2018/04/11 09:25:39 Applied edit header: P:\Cruise_Data_Processing\2017-42\Processing\doc\2017-42-HDR.TXT Channel 1: Pressure [decibar] Name: Pressure:StrainGauge ==> Pressure Channel 2: Depth [metres] Name: Depth:Salt_Water ==> Depth Channel 4: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:URU:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 7: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 5: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a $END *COMMENTS SBE HEADER Sea-Bird SBE25 Data File: FileName = C:\Users\WaterProperties-16\Desktop\2017-42 CTD\2017-42-3455001.hex Software Version 1.59 Temperature SN = 2449 Conductivity SN = 1764 System UpLoad Time = Jul 28 2017 22:29:10 2017-42 JB ds SBE 25 CTD V 4.1c SN 0404 07/28/17 22:26:13.644 external pressure sensor, range = 10153 psia, tcval = 37 xtal = 9437232 clk = 32767.995 vmain = 12.7 iop = 202 vlith = 5.2 ncasts = 8 samples = 21281 free = 623692 lwait = 0 msec CTD configuration: number of scans averaged = 1, data stored at 8 scans per second real time data transmitted at 8 scans per second minimum conductivity frequency for pump turn on = 3100 pump delay = 45 seconds battery type = ALKALINE 3 external voltages sampled stored voltage # 0 = external voltage 0 stored voltage # 1 = external voltage 4 stored voltage # 2 = external voltage 5 S> dh cast 1 07/26 20:28:13 smpls 1815 to 3638 nv = 3 avg = 1 stp = switch of S> # nquan = 12 # nvalues = 1824 # units = specified # name 0 = scan: Scan Count # name 1 = prSM: Pressure, Strain Gauge [db] # name 2 = depSM: Depth [salt water, m], lat = 49.00 # name 3 = t090C: Temperature [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 6 = sbeox0V: Oxygen raw, SBE 43 [V] # name 7 = ph: pH # name 8 = dz/dtM: Descent Rate [m/s] # name 9 = sal00: Salinity, Practical [PSU] # name 10 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 11 = flag: flag # span 0 = 1, 1824 # span 1 = 0.330, 68.991 # span 2 = 0.327, 68.395 # span 3 = 8.5039, 13.9797 # span 4 = 0.093867, 3.760231 # span 5 = -0.3120, 62.6721 # span 6 = 0.0000, 3.0012 # span 7 = 6.841, 9.136 # span 8 = -1.831, 1.398 # span 9 = 0.5956, 32.8470 # span 10 = -2.2551, 24.2539 # span 11 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.125 # start_time = Jul 26 2017 20:28:13 [Instrument's time stamp, header] # bad_flag = -9.990e-29 # # # # # 2449 # 16-Dec-15 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35536976e-003 # 6.43861843e-004 # 2.35988525e-005 # 2.27425418e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 23-Feb-17 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15782044e+000 # 4.88269411e-001 # -7.82043110e-004 # 6.18774318e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0464 # 28-Feb-17 # 7.973872e+002 # -2.072374e-001 # 2.547327e-007 # 0.00000 # # # # # # 0852 # 08-Mar-17 # 4.5991 # 2.5690 # # # # # # 1176 # 02-Mar-17 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 6.1597e-001 # -0.5257 # -4.5701e-003 # 2.1508e-004 # -3.4602e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.6700 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # FLRTD-4185 # 07-Mar-2017 # 1.30000000e+001 # # 0.0240 # # # # datcnv_date = Apr 06 2018 12:10:32, 7.23.2 [datcnv_vars = 9] # datcnv_in = P:\Cruise_Data_Processing\2017-42\Processing\rename\2017-42-1037.h ex P:\Cruise_Data_Processing\2017-42\Processing\doc\2017-53-ctd.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wfilter_date = Apr 06 2018 14:16:37, 7.23.2 # wfilter_in = P:\Cruise_Data_Processing\2017-42\Processing\convert\2017-42-1037 .cnv # wfilter_excl_bad_scans = yes # wfilter_action prSM = cosine, 5 # wfilter_action depSM = cosine, 5 # wfilter_action t090C = cosine, 5 # wfilter_action c0S/m = cosine, 5 # alignctd_date = Apr 06 2018 14:17:08, 7.23.2 # alignctd_in = P:\Cruise_Data_Processing\2017-42\Processing\wfilter\2017-42-103 7.cnv # alignctd_adv = sbeox0V 2.500 # celltm_date = Apr 06 2018 14:17:44, 7.23.2 # celltm_in = P:\Cruise_Data_Processing\2017-42\Processing\align\2017-42-1037.cn v # celltm_alpha = 0.0400, 0.0000 # celltm_tau = 8.0000, 0.0000 # celltm_temp_sensor_use_for_cond = primary, # Derive_date = Apr 06 2018 14:19:17, 7.23.2 [derive_vars = 2] # Derive_in = P:\Cruise_Data_Processing\2017-42\Processing\celltm\2017-42-1037.c nv P:\Cruise_Data_Processing\2017-42\Processing\doc\2017-42-ctd.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove a few records corrupted by shed wakes. Data Processing Notes: ---------------------- The length of the surface soaks varied greatly, with some not being long enough for the pumps to come on and equilibration of pumped channels to be achieved. Dissolved Oxygen and pH:SBE data are nominal and unedited, except that some records were removed in editing temperature and salinity and some bad near-surface dissolved oxygen data were removed. Channel Fluorescence:URU:Wetlabs was removed from casts #1001-1035 because the protective cap had not been removed. The data that remain are nominal. Some small negative values in fluorescence were set to 0 using program Calibrate. There was no calibration sampling available from this cruise. An inter-ship comparison of 2 casts from a June 2017 cruise using these sensors with a cast from a cruise that did include calibration sampling, suggested that the salinity values from this CTD were accurate but that dissolved oxygen values were likely low by up to 4%. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see processing report: 2017-42-Processing_Report.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS !Name Units Fmla Pad Coefficients !---------------------------------- -------- ---- ------ ------------ Fluorescence:URU:Wetlabs:ECO-AFL mg/m^3 10 -99 () (0 0) $END !--1--- --2--- ---3---- ---4--- ---5--- ---6---- --7--- --8-- -9-- !Pressu Depth Temperat Fluores pH:SBE: Salinity Oxygen Oxyge Numb !re ure: cence: Nominal :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ ------ -------- ------- ------- -------- ------ ----- ---- *END OF HEADER 1.4 1.3 13.8106 16.218 9.131 30.9527 8.80 383.8 5 2.0 2.0 13.8101 16.011 9.132 30.9533 8.81 384.5 9 2.9 2.9 13.8121 15.704 9.134 30.9532 8.84 385.7 8 4.1 4.1 13.8191 16.348 9.134 30.9519 8.84 385.6 10 5.0 5.0 13.8021 16.303 9.133 30.9550 8.74 381.5 15 6.0 5.9 13.6912 15.981 9.117 30.9718 8.33 363.3 13 6.9 6.9 13.3680 14.231 9.041 31.0110 7.44 324.4 10 8.0 7.9 13.2446 14.559 8.989 31.0490 6.90 301.0 7 9.0 8.9 13.0878 11.252 8.959 31.0690 6.59 287.5 6 10.0 9.9 12.9453 9.220 8.936 31.0832 6.36 277.4 6 11.1 11.0 12.5825 6.318 8.905 31.1330 6.12 266.8 9 12.0 11.9 11.8328 6.037 8.822 31.2345 5.74 250.5 12 13.0 12.9 11.3296 4.938 8.772 31.2801 5.53 241.0 8 14.0 13.9 11.2667 3.929 8.758 31.2839 5.42 236.5 6 14.9 14.8 11.1746 3.976 8.740 31.2866 5.34 232.8 7 16.0 15.9 11.0044 3.588 8.725 31.2951 5.27 229.9 7 17.0 16.9 10.9510 3.249 8.711 31.3040 5.21 227.2 6 17.8 17.6 10.8243 2.974 8.706 31.3267 5.16 225.1 4 18.9 18.8 10.4506 2.050 8.649 31.4143 4.71 205.2 10 20.0 19.9 10.1511 1.262 8.611 31.5387 4.51 196.5 6 21.0 20.9 9.9517 0.876 8.595 31.6348 4.40 191.7 6 22.0 21.8 9.8522 0.902 8.583 31.6976 4.32 188.4 6 23.0 22.8 9.7704 0.731 8.576 31.7560 4.26 185.7 7 24.0 23.8 9.7360 0.522 8.572 31.7868 4.21 183.2 11 25.0 24.8 9.6777 0.561 8.563 31.8359 4.13 179.8 14 26.0 25.7 9.6419 1.018 8.555 31.8612 4.05 176.6 9 27.0 26.7 9.6096 0.831 8.548 31.8842 4.00 174.5 6 28.0 27.8 9.5716 0.561 8.540 31.9125 3.95 172.1 7 29.0 28.8 9.5053 0.817 8.534 31.9653 3.90 169.9 6 30.0 29.8 9.4533 0.459 8.529 32.0099 3.86 168.2 10 31.0 30.7 9.4184 0.402 8.526 32.0414 3.82 166.3 11 32.0 31.7 9.4048 0.460 8.525 32.0544 3.79 165.1 9 33.0 32.7 9.3870 0.383 8.522 32.0723 3.75 163.3 9 34.0 33.7 9.3516 0.386 8.517 32.1005 3.71 161.4 9 35.0 34.7 9.3206 0.422 8.515 32.1255 3.68 160.3 9 36.0 35.7 9.3144 0.388 8.511 32.1314 3.66 159.3 9 37.0 36.7 9.3016 0.339 8.511 32.1419 3.64 158.5 7 38.0 37.7 9.2929 0.405 8.510 32.1512 3.62 157.7 6 39.1 38.7 9.2691 0.386 8.507 32.1736 3.60 157.0 9 40.0 39.7 9.2584 0.421 8.507 32.1843 3.59 156.3 16 41.0 40.6 9.2528 0.369 8.505 32.1913 3.58 155.9 9 42.0 41.6 9.2467 0.286 8.504 32.1979 3.57 155.5 6 43.0 42.6 9.2497 0.266 8.507 32.2022 3.57 155.4 7 44.0 43.6 9.2558 0.321 8.507 32.2074 3.58 156.1 8 45.0 44.6 9.2632 0.378 8.511 32.2135 3.60 156.8 6 46.0 45.6 9.2614 0.303 8.511 32.2421 3.57 155.6 13 47.0 46.6 9.1535 0.329 8.495 32.3311 3.46 150.6 10 48.0 47.6 9.0351 0.300 8.477 32.4009 3.35 146.1 7 49.0 48.6 8.9733 0.238 8.469 32.4422 3.27 142.6 9 50.0 49.6 8.9472 0.205 8.457 32.4647 3.20 139.3 7 51.0 50.6 8.8935 0.241 8.453 32.5041 3.15 137.2 7 52.0 51.6 8.8655 0.175 8.449 32.5285 3.12 135.9 7 53.0 52.6 8.8348 0.176 8.448 32.5523 3.12 135.8 8 54.1 53.6 8.7802 0.170 8.452 32.5977 3.13 136.4 11 55.0 54.5 8.7603 0.180 8.449 32.6168 3.12 135.9 12 56.0 55.5 8.7551 0.149 8.446 32.6234 3.09 134.6 7 57.0 56.5 8.7516 0.132 8.443 32.6274 3.08 134.0 6 58.0 57.5 8.7482 0.128 8.440 32.6311 3.06 133.0 7 59.0 58.5 8.7440 0.156 8.437 32.6354 3.03 131.8 6 60.0 59.5 8.7346 0.087 8.435 32.6427 3.02 131.3 7 61.1 60.6 8.6941 0.117 8.434 32.6770 2.99 130.4 11 61.9 61.3 8.6791 0.104 8.429 32.6891 2.95 128.5 14 63.0 62.4 8.6639 0.096 8.418 32.7012 2.89 125.7 7 64.0 63.4 8.6301 0.125 8.414 32.7292 2.85 124.2 6 65.0 64.4 8.6005 0.109 8.414 32.7587 2.83 123.3 6 66.0 65.4 8.5922 0.074 8.412 32.7691 2.81 122.5 6 67.0 66.4 8.5750 0.080 8.407 32.7840 2.78 121.2 7 68.0 67.4 8.5437 0.094 8.401 32.8106 2.74 119.4 10 68.8 68.2 8.5122 0.106 8.397 32.8397 2.70 117.4 18