*2018/02/05 11:12:49.41 *IOS HEADER VERSION 2.0 2016/04/28 2016/06/13 IVF16 *FILE START TIME : UTC 2017/09/07 16:04:47.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 50 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 127CA718 NUMBER OF CHANNELS : 10 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 2.796 51.783 2 Depth metres 2.768 51.338 3 Temperature:Primary 'deg C (ITS90)' 8.7345 15.0121 4 Transmissivity %/metre 32.2 60.2 5 Fluorescence:URU:Seapoint mg/m^3 0.476 4.433 6 PAR uE/m^2/sec 0.61E-01 64.956 7 Salinity:T0:C0 PSS-78 30.1949 32.6482 8 Oxygen:Dissolved:SBE mL/L 3.844 6.948 9 Oxygen:Dissolved:SBE umol/kg 167.3827 303.2859 10 Number_of_bin_records n/a 7 31 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 8 F ' ' 3 6 -99 ' ' 7 F ' ' 1 7 -99 ' ' 9 F ' ' 4 8 -99 ' ' 7 F ' ' 2 9 -99 ' ' 6 F ' ' 1 10 -99 ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2017-09\Pro $END *ADMINISTRATION MISSION : 2017-09 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : La Perouse SCIENTIST : Robert M. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : WCVI STATION : CS05 EVENT NUMBER : 151 LATITUDE : 50 55.98000 N ! (deg min) LONGITUDE : 128 59.92000 W ! (deg min) WATER DEPTH : 62 ALTIMETER (M) : 10.21 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0550 LOCATION : Mid-ship ! custom item $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------------- -------------- ---------- Temperature ' ' 4054 Conductivity ' ' 1766 'Pressure:Digiquartz with TC' ' ' 0550 Temperature:2 ' ' 4484 Conductivity:2 ' ' 3531 'Oxygen:SBE 43' ' ' 1119 Fluorometer:Seapoint ' ' 3685 PAR/Irradiance:Biospherical/Licor ' ' 70613 Altimeter ' ' 62355 'Transmissometer:WET Labs C-Star' ' ' 1396DR $END $REMARKS SOFTWARE VERSION SEASAVE V 7.26.7.107 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.5.2 2018/01/10 09:47:55 3317 3317 CLEAN 5.2.2 2018/01/10 09:54:30 3317 3317 SHIFTDAT 3.4 2018/01/15 10:45:27 3317 3317 SHIFTDAT 3.4 2018/01/15 10:52:18 3317 3317 SHIFTDAT 3.4 2018/01/15 10:58:35 3317 3317 DELETE 6.3 2018/01/15 11:03:14 3317 1360 ADTIMCH 4.4 2018/01/15 11:40:03 1360 1360 CTDEDIT 5.2.3 2018/01/25 09:57:17 1360 1172 CALIB 11.9 2018/02/02 15:29:26 1172 1172 FILTERS 4.3 2018/02/02 15:40:51 1172 1172 BINAVE 4.2 2018/02/02 15:43:06 1172 50 REMOVECH 8.2 2018/02/02 16:46:58 50 50 CHGUNITS 3.1.1 2018/02/02 16:48:05 50 50 REORDER 1.3.1 2018/02/02 16:48:21 ? ? HDREDIT2 3.1.1 2018/02/05 11:12:49 ? ? $END $REMARKS -CLEAN functions: 2018/01/10 09:49:08 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.60 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.60 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 42.52 dbars Sample interval (from FILE section of header) = 0.042 seconds. -The following ADTIMCH parameters were used. Add Day-Of-Year -CTDEDIT v5.2.3 2018/01/25 09:57:17 188 records were deleted in this editing session. No data values were changed. -CALIB parameters: 2018/02/02 15:29:26 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2017-09\Processing\doc\2017-09-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 10 Fluorescence:URU:Seapoint mg/m^3 11 0.8244400E+01 -0.3430000E-01 Time:Day_Of_Year 16 Salinity:T0:C0 PSS-78 10 0.2000000E-02 0.1000000E+01 18 Oxygen:Dissolved:SBE mL/L 10 0.6060000E-01 0.1062000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2018/02/02 16:46:58 The following CHANNEL(S) were removed: Time:Day_Of_Year [DAY_OF_YEAR] Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Altimeter [metres] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: Temperature reference channel: Temperature:Primary [deg C (ITS90)] Salinity reference channel: Salinity:T0:C0 [PSS-78] 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2018/02/05 11:12:49 Applied edit header: P:\Cruise_Data_Processing\2017-09\Processing\doc\2017-09-HDR.TXT Channel 1: Pressure [decibar] Format: F11.2 ==> F7.1 Channel 6: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 8: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 10: Number_of_bin_records [n/a] Pad: ' ' ==> -99 Channel 2: Depth [metres] Name: Depth:Salt_Water ==> Depth Format: F10.3 ==> F7.1 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\CTD Data\2017-09\2017-09-0151.hex Software Version Seasave V 7.26.7.107 Temperature SN = 4054 Conductivity SN = 1766 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Sep 07 2017 16:07:33 NMEA Latitude = 50 55.98 N NMEA Longitude = 128 59.92 W NMEA UTC (Time) = Sep 07 2017 16:04:47 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Tully: 2017-09 Station: CS05 Depth: 62 The real CS05 System UTC = Sep 07 2017 16:07:33 # nquan = 18 # nvalues = 3317 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = depSM: Depth [salt water, m] # name 3 = t090C: Temperature [ITS-90, deg C] # name 4 = t190C: Temperature, 2 [ITS-90, deg C] # name 5 = c0S/m: Conductivity [S/m] # name 6 = c1S/m: Conductivity, 2 [S/m] # name 7 = CStarTr0: Beam Transmission, WET Labs C-Star [%] # name 8 = flSP: Fluorescence, Seapoint # name 9 = sbeox0V: Oxygen raw, SBE 43 [V] # name 10 = par: PAR/Irradiance, Biospherical/Licor # name 11 = altM: Altimeter [m] # name 12 = dz/dtM: Descent Rate [m/s] # name 13 = pumps: Pump Status # name 14 = sal00: Salinity, Practical [PSU] # name 15 = sal11: Salinity, Practical, 2 [PSU] # name 16 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 17 = flag: flag # span 0 = 1, 3317 # span 1 = 1.269, 52.523 # span 2 = 1.258, 52.061 # span 3 = 8.6548, 15.0208 # span 4 = 8.6522, 15.0219 # span 5 = 3.467476, 3.760774 # span 6 = 3.467473, 3.761415 # span 7 = 74.9598, 88.1012 # span 8 = 7.8144e-01, 6.6178e+00 # span 9 = 1.4174, 2.4432 # span 10 = 4.5953e-02, 2.5340e+02 # span 11 = 0.00, 100.00 # span 12 = -1.321, 1.257 # span 13 = 0, 1 # span 14 = 30.0088, 32.7151 # span 15 = 30.1754, 32.7191 # span 16 = 3.3557, 6.5338 # span 17 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Sep 07 2017 16:04:47 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 4054 # 22-Feb-17 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.38616406e-003 # 6.44028261e-004 # 2.29631886e-005 # 2.07487665e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1766 # 30-Mar-17 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.12892961e+000 # 4.88377974e-001 # -6.29237468e-004 # 5.38259078e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0550 # 24-Feb-17 # -4.232943e+004 # 1.065076e-001 # 1.464900e-002 # 3.694200e-002 # 0.000000e+000 # 3.041883e+001 # -3.536199e-004 # 4.388420e-006 # 2.583800e-009 # 0.99995690 # 0.08882 # 0.000000e+000 # 1.286170e-002 # -9.445820e+000 # # # # # # 4484 # 22-Feb-17 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.39937667e-003 # 6.40472023e-004 # 2.15385278e-005 # 1.84322868e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3531 # 30-Mar-17 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.02129539e+001 # 1.56309188e+000 # -2.40628351e-003 # 2.66312047e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 1119 # 28-Mar-17 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 5.7570e-001 # -0.5165 # -3.9454e-003 # 1.7154e-004 # -2.7543e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.7500e-002 # 1.0300 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 3685 # 13-Mar-17 # # 2 # 0.000 # # # # # # 70613 # 03/21/16 # 1.00000000 # 0.00000000 # 11876484560.57000000 # 1.00000000 # -0.08460000 # # # # # # # # # 62355 # # 15.000 # 0.000 # # # # # # # # # 1396DR # Feb 2nd 2016 # 19.3228 # -0.0193 # 0.250 # # # # # # # datcnv_date = Jan 09 2018 16:03:24, 7.23.2 [datcnv_vars = 14] # datcnv_in = P:\Cruise_Data_Processing\2017-09\RAW\CTD\2017-09-0151.hex P:\Crui se_Data_Processing\2017-09\Processing\doc\2017-09-ctd.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Jan 09 2018 16:13:01, 7.23.2 # wildedit_in = P:\Cruise_Data_Processing\2017-09\Processing\convert\2017-09-015 1.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM depSM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Jan 10 2018 09:23:22, 7.23.2 # alignctd_in = P:\Cruise_Data_Processing\2017-09\Processing\wildedit\2017-09-01 51.cnv # alignctd_adv = sbeox0V 3.500 # celltm_date = Jan 10 2018 09:31:07, 7.23.2 # celltm_in = P:\Cruise_Data_Processing\2017-09\Processing\align\2017-09-0151.cn v # celltm_alpha = 0.0245, 0.0245 # celltm_tau = 9.5000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Jan 10 2018 09:39:56, 7.23.2 [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2017-09\Processing\celltm\2017-09-0151.c nv P:\Cruise_Data_Processing\2017-08\Processing\doc\2017-08-ctd.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some near-surface records and records corrupted by shed wakes from the bottom of the cast. --------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Transmissivity, Fluorescence and PAR data are nominal and unedited except that some records were removed in editing temperature and salinity. The fluorometer values drifted during the previous cruise that used this equipment. That drift continued starting with dark values early in the cruise of about 0.2ug/L and rising to about 0.4 ug/L by cast #177. At that point the tubing and pump were cleaned and dark values then returned to the normal range. A time-dependent correction was applied to casts #2 to #177 based on values at 2000m with a small adjustment to ensure there would be no negative values. The correction was an offset that was applied to the whole profile. NOTE: While the CTD fluorescence data are expressed in concentration units, they do not always compare well to extracted chlorophyll samples, particularly for casts far from shore. It is recommended that users check extracted chlorophyll values where available. Dissolved oxygen was calibrated using the method described in SeaBird Application Note #64-2, June 2012 revision, except that a small offset in the fit was allowed. The SBE DO sensor has a fairly long response time so data accuracy is not as high when it is in motion as it is during stops for bottles. This will be especially true when vertical DO gradients are large. To get an estimate of the accuracy of the SBE DO data during downcasts (after recalibration) a rough comparison was made between downcast SBE DO and upcast titrated samples. Some of the difference will be due to problems with flushing of Niskin bottles and/or analysis errors, so the following statement likely underestimates SBE DO accuracy. Downcast (CTD files) Oxygen:Dissolved:SBE data are considered, very roughly, to be: ±0.5 mL/L from 0 to 125db ±0.1 mL/L from 125db to 500db ±0.05 mL/L from 500db to 1000db ±0.02 mL/L below 1000db For details on the processing see document: 2017-09_Processing_Report.doc. --------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! --------------------------- -------- ---- ------ ------------ Fluorescence:URU:Seapoint mg/m^3 11 -99 (Time:Day_Of_Year) (8.2444 -0.343E-01) Salinity:T0:C0 PSS-78 10 -99 () (0.2E-02 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (0.606E-01 1.062) $END !--1--- --2--- ---3---- --4-- ---5--- --6--- ---7---- --8--- --9-- -10- !Pressu Depth Temperat Trans Fluores PAR Salinity Oxygen Oxyge Numb !re ure: missi cence: :T0:C0 : n: er_o ! Primary vity URU: Dissol Disso ~bin ! Seapoin ved: lved: _rec ! t SBE SBE ords !------ ------ -------- ----- ------- ------ -------- ------ ----- ---- *END OF HEADER 2.8 2.8 15.0121 43.9 1.853 65.0 30.1949 6.54 285.6 7 4.2 4.2 14.9740 44.1 1.837 45.6 30.2051 6.57 286.7 11 5.0 4.9 14.8877 43.9 2.054 37.0 30.2261 6.60 288.2 16 6.0 6.0 14.3943 41.4 2.340 29.9 30.3568 6.78 296.1 25 7.1 7.0 13.9078 35.5 3.066 22.9 30.4938 6.95 303.3 26 8.0 7.9 13.4092 33.5 4.161 18.5 30.6444 6.92 302.2 13 9.0 8.9 13.2785 32.2 4.433 14.5 30.6923 6.76 295.2 23 10.0 9.9 13.0031 32.6 3.786 11.0 30.8098 6.60 287.8 21 11.0 10.9 12.6927 34.9 3.506 8.4 30.9946 6.40 279.4 22 12.0 11.9 12.3688 38.2 3.264 6.5 31.1398 6.18 269.6 27 13.0 12.9 11.9769 42.0 2.864 5.1 31.3183 5.92 258.4 31 14.0 13.9 11.7357 44.3 2.345 4.0 31.3998 5.61 244.8 28 15.0 14.9 11.4778 47.2 1.969 3.2 31.4470 5.34 232.7 26 16.0 15.9 11.2572 50.7 1.607 2.7 31.5790 5.13 223.9 24 17.0 16.8 10.9964 54.4 1.327 2.4 31.7178 5.01 218.4 23 18.0 17.8 10.8220 56.8 1.138 2.1 31.7722 4.94 215.1 21 19.0 18.8 10.7562 57.5 1.063 1.8 31.7977 4.88 212.6 21 20.0 19.8 10.6616 57.7 0.973 1.6 31.8243 4.84 210.8 21 21.0 20.8 10.5958 58.1 0.913 1.5 31.8415 4.80 209.2 25 22.0 21.8 10.5260 58.3 0.859 1.3 31.8639 4.77 207.9 27 23.0 22.8 10.4989 58.3 0.823 1.2 31.8734 4.73 206.3 26 24.0 23.8 10.4483 58.5 0.796 1.1 31.8900 4.71 205.2 22 25.0 24.8 10.4171 58.6 0.779 1.0 31.9014 4.68 204.1 22 26.0 25.8 10.3761 58.5 0.756 0.8 31.9136 4.66 203.2 22 27.0 26.8 10.3142 58.1 0.748 0.8 31.9301 4.65 202.5 27 28.0 27.7 10.2774 58.9 0.726 0.7 31.9429 4.62 201.2 30 29.0 28.7 10.2329 59.1 0.696 0.6 31.9591 4.58 199.7 27 30.0 29.7 10.1316 59.3 0.670 0.6 32.0029 4.55 198.2 23 31.0 30.8 10.0511 59.5 0.655 0.5 32.0324 4.52 196.8 22 32.0 31.7 9.9574 59.7 0.641 0.5 32.0633 4.48 195.2 24 33.0 32.7 9.8584 59.8 0.613 0.4 32.0912 4.45 193.8 24 34.0 33.7 9.7566 60.0 0.581 0.4 32.1202 4.42 192.8 22 35.0 34.7 9.6736 60.0 0.574 0.4 32.1402 4.41 192.0 20 36.0 35.7 9.6114 60.0 0.575 0.3 32.1570 4.39 191.2 20 37.0 36.7 9.5994 60.1 0.562 0.3 32.1600 4.37 190.2 24 38.0 37.7 9.5597 60.1 0.548 0.3 32.1784 4.32 188.2 30 39.0 38.7 9.4412 60.2 0.539 0.2 32.2237 4.27 186.0 30 40.0 39.6 9.3609 60.2 0.528 0.2 32.2513 4.21 183.5 25 41.0 40.6 9.2471 60.2 0.540 0.2 32.3054 4.18 182.1 25 42.0 41.6 9.1950 60.2 0.523 0.2 32.3294 4.16 181.1 26 43.0 42.6 9.1733 60.2 0.513 0.2 32.3379 4.14 180.2 26 44.0 43.6 9.1481 60.1 0.506 0.2 32.3487 4.12 179.5 23 45.0 44.6 9.1233 60.1 0.506 0.1 32.3582 4.10 178.7 20 46.0 45.6 9.1101 59.1 0.505 0.1 32.3627 4.09 178.1 19 47.0 46.6 9.0906 60.0 0.494 0.1 32.3707 4.07 177.1 25 48.0 47.6 9.0435 60.1 0.480 0.1 32.3999 4.03 175.4 31 49.0 48.5 9.0236 60.1 0.478 0.1 32.4120 3.94 171.6 30 50.0 49.6 8.9287 60.0 0.505 0.1 32.5008 3.86 168.0 22 51.0 50.6 8.8448 59.8 0.482 0.1 32.5675 3.84 167.4 23 51.8 51.3 8.7345 59.5 0.476 0.1 32.6482 3.90 169.7 16