*2016/09/13 09:19:02.54 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2016/05/29 21:56:17.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 44 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 7453E1F1 NUMBER OF CHANNELS : 10 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 2.874 45.913 2 Temperature:Secondary 'deg C (ITS90)' 8.0551 11.1876 3 Transmissivity %/metre 32.8 54.6 4 Fluorescence:URU:Seapoint mg/m^3 0.392 2.892 5 PAR uE/m^2/sec 0.99 193.594 6 PAR1 uE/m^2/sec 0.977 172.737 7 Salinity:T1:C1 PSS-78 32.3295 33.3018 8 Oxygen:Dissolved:SBE mL/L 3.8 6.914 9 Oxygen:Dissolved:SBE umol/kg 165.3601 301.2271 10 Number_of_bin_records n/a 10 40 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 6 F ' ' 1 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 7 F ' ' 1 6 -99 ' ' 7 F ' ' 1 7 -99 ' ' 9 F ' ' 4 8 -99 ' ' 7 F ' ' 2 9 -99 ' ' 6 F ' ' 1 10 -99 ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2016-47\Pro $END *ADMINISTRATION MISSION : 2016-47 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : La Perouse Zooplankton Monitoring SCIENTIST : Yelland D. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : WCVI STATION : LBP1 EVENT NUMBER : 83 LATITUDE : 50 4.75000 N ! (deg min) LONGITUDE : 127 52.81000 W ! (deg min) WATER DEPTH : 53 ALTIMETER (M) : 6.54 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 LOCATION : Mid-ship ! custom item $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------------------- -------------- ---------- Temperature ' ' 2106 Conductivity ' ' 2280 'Pressure:Digiquartz with TC' ' ' 0443 Temperature:2 ' ' 2663 Conductivity:2 ' ' 2754 'Oxygen:SBE 43' ' ' 0997 Fluorometer:Seapoint ' ' 3640 'Transmissometer:WET Labs C-Star' ' ' 1185DR Altimeter ' ' 62354 PAR/Irradiance:Biospherical/Licor ' ' 70613 PAR/Irradiance:Biospherical/Licor:2 ' ' 4615 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.23.2 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.5 2016/08/05 12:12:14 5055 5055 CLEAN 5.2.1 2016/08/05 12:21:10 5055 5055 SHIFTDAT 3.4 2016/08/09 10:29:53 5055 5055 SHIFTDAT 3.4 2016/08/09 11:23:21 5055 5055 SHIFTDAT 3.4 2016/08/09 11:42:41 5055 5055 DELETE 6.3 2016/08/09 11:51:20 5055 1259 CTDEDIT 5.0.4 2016/08/11 15:18:59 1259 983 CALIB 11.8.1 2016/08/19 16:22:27 983 983 CALIB 11.8.1 2016/08/19 16:27:20 983 983 FILTERS 4.3 2016/08/19 16:32:31 983 983 BINAVE 4.2 2016/08/19 16:36:44 983 44 REMOVECH 8.2 2016/08/23 11:33:24 44 44 CHGUNITS 3.1 2016/08/23 14:15:29 44 44 REORDER 1.3.1 2016/08/23 14:16:14 ? ? HDREDIT2 3.0.2 2016/08/23 14:19:06 ? ? HDREDIT2 3.0.2 2016/09/13 09:19:02 ? ? $END $REMARKS -CLEAN functions: 2016/08/05 12:13:30 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.40 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.60 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 36.66 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2016/08/11 15:18:59 276 records were deleted in this editing session. 3 changes in channel Salinity:T1:C1 -CALIB parameters: 2016/08/19 16:22:27 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Salinity is computed Calibration file = P:\Cruise_Data_Processing\2016-47\Processing\doc\2016-47-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 3 Temperature:Primary deg C (IT 10 -0.2000000E-02 0.1000000E+01 17 Oxygen:Dissolved:SBE mL/L 10 0.3770000E-01 0.1020800E+01 Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 15 Salinity:T0:C0 PSS-78 130 Pressure Temperature:Primary Conductivity:Primary -CALIB parameters: 2016/08/19 16:27:20 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2016-47\Processing\doc\2016-47-recal2.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 15 Salinity:T0:C0 PSS-78 10 0.4000000E-02 0.1000000E+01 16 Salinity:T1:C1 PSS-78 10 0.2000000E-02 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2016/08/23 11:33:24 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Altimeter [metres] Descent_Rate [m/s] Status:Pump Salinity:T0:C0 [PSS-78] Flag -CHANGE units: Temperature reference channel: Temp* Salinity reference channel: Sal* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2016/08/23 14:19:06 Applied edit header: P:\Cruise_Data_Processing\2016-47\Processing\doc\2016-47-hdr.txt Channel 1: Pressure [decibar] Format: F11.2 ==> F7.1 Channel 5: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 8: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 2: Temperature:Secondary [deg C (ITS90)] Format: F8.3 ==> F9.4 Channel 6: PAR1 [uE/m^2/sec] Name: PAR:1 ==> PAR1 Format: F11.3 ==> F7.1 Channel 10: Number_of_bin_records [n/a] Pad: ' ' ==> -99 -HEADER EDITS: 2016/09/13 09:19:02 Applied edit header: P:\Cruise_Data_Processing\Temp\2016-47-temp\CTD\2016-47-HDR2.TXT $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\CTD Data\2016-47\2016-47-0083.hex Software Version Seasave V 7.23.2 Temperature SN = 2106 Conductivity SN = 2280 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = May 29 2016 21:58:36 NMEA Latitude = 50 04.75 N NMEA Longitude = 127 52.81 W NMEA UTC (Time) = May 29 2016 21:56:17 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Mission: 2016-47 Ship: J.P. Tully Station: LBP1 Depth: 53 System UTC = May 29 2016 21:58:36 # nquan = 18 # nvalues = 5055 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = CStarTr0: Beam Transmission, WET Labs C-Star [%] # name 7 = flSP: Fluorescence, Seapoint # name 8 = sbeox0V: Oxygen raw, SBE 43 [V] # name 9 = par: PAR/Irradiance, Biospherical/Licor # name 10 = par1: PAR/Irradiance, Biospherical/Licor, 2 # name 11 = altM: Altimeter [m] # name 12 = dz/dtM: Descent Rate [m/s] # name 13 = pumps: Pump Status # name 14 = sal00: Salinity, Practical [PSU] # name 15 = sal11: Salinity, Practical, 2 [PSU] # name 16 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 1 # name 17 = flag: flag # span 0 = 1, 5055 # span 1 = 1.741, 46.664 # span 2 = 8.0467, 11.2559 # span 3 = 8.0313, 11.2641 # span 4 = 3.468676, 3.658967 # span 5 = 3.468592, 3.659628 # span 6 = 73.9737, 86.1399 # span 7 = 3.5409e-01, 4.3223e+00 # span 8 = 2.0474, 3.4506 # span 9 = 9.1492e-01, 8.2783e+02 # span 10 = 8.8881e-01, 5.2812e+02 # span 11 = 5.98, 50.94 # span 12 = -1.680, 1.715 # span 13 = 0, 1 # span 14 = 32.1987, 33.3080 # span 15 = 32.3252, 33.3147 # span 16 = 3.6035, 6.8598 # span 17 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = May 29 2016 21:56:17 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 17-Dec-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14703785e-003 # 6.31044927e-004 # 2.13121431e-005 # 2.18594910e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2280 # 19-Dec-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.00904009e+001 # 1.35149315e+000 # -1.84720682e-003 # 1.90856808e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0443 # 17-Dec-14 # -4.435292e+004 # -1.635794e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993627e+001 # -3.271008e-004 # 3.759160e-006 # 1.565300e-009 # 0.99991613 # -0.54760 # 0.000000e+000 # 1.282462e-002 # -8.599824e+000 # # # # # # 2663 # 15-Jan-15 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36565531e-003 # 6.42337654e-004 # 2.40578991e-005 # 2.42263656e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2754 # 19-Dec-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.05920237e+001 # 1.61356129e+000 # -1.94911294e-003 # 2.41671700e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0997 # 17-Jan-15 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.0785e-001 # -0.6967 # -3.5082e-003 # 1.2934e-004 # -1.8411e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.6200 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 3640 # # # 2 # 0.000 # # # # # # 1185DR # APR 27. 2016 # 19.3479 # -1.1028 # 0.250 # # # # # # # # # 62354 # # 15.000 # 0.000 # # # # # # # # # 70613 # 03/21/16 # 1.00000000 # 0.00000000 # 11876484560.57000000 # 1.00000000 # -0.08460813 # # # # # # 4615 # 16-Mar-2011 # 1.00000000 # 0.00000000 # 3367003367.00000000 # 1.00000000 # -0.40341896 # # # # datcnv_date = Aug 05 2016 11:13:48, 7.23.2 [datcnv_vars = 14] # datcnv_in = P:\Cruise_Data_Processing\2016-47\RAW\CTD\2016-47-0083.hex P:\Crui se_Data_Processing\2016-47\Processing\doc\2016-47-ctd2.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Aug 05 2016 11:35:21, 7.23.2 # wildedit_in = P:\Cruise_Data_Processing\2016-47\Processing\convert\2016-47-008 3.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Aug 05 2016 11:40:35, 7.23.2 # alignctd_in = P:\Cruise_Data_Processing\2016-47\Processing\wildedit\2016-47-00 83.cnv # alignctd_adv = sbeox0V 3.000 # celltm_date = Aug 05 2016 11:46:09, 7.23.2 # celltm_in = P:\Cruise_Data_Processing\2016-47\Processing\align\2016-47-0083.cn v # celltm_alpha = 0.0245, 0.0245 # celltm_tau = 9.5000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Aug 05 2016 11:56:28, 7.23.2 [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2016-47\Processing\celltm\2016-47-0083.c nv P:\Cruise_Data_Processing\2016-47\Processing\doc\2016-47-ctd2.XMLCON # derive_time_window_docdt = seconds: 1 # derive_ox_tau_correction = yes # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove records corrupted by shed wakes and to clean salinity. --------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Transmissivity, Fluorescence and PAR data are nominal and unedited except that some records were removed in editing temperature and salinity. For details on how the transmissivity calibration parameters were calculated see the document in folder "\cruise_data\documents\transmissivity". Dissolved oxygen was calibrated using the method described in SeaBird Application Note #64-2, June 2012 revision, except that a small offset in the fit was allowed. Downcast Oxygen:Dissolved:SBE data are considered, very roughly, to be: ±0.4 mL/L from 0 to 100db ±0.2 mL/L from 100db to 300db ±0.1 mL/L from 300db to 800db ±0.02 mL/L below 800db There were 2 Biospherical/Licor PAR sensors. The one identified as PAR refers to a new sensor (S/N 70613) and PAR1 refers to an older sensor (S/N 4615). For details on the processing see document: 2016-47_Processing_Report.doc. --------------------------------------------------------------------------------- NOTE: While the CTD fluorescence data are expressed in concentration units, they do not always compare well to extracted chlorophyll samples, particularly for casts far from shore. It is recommended that users check extracted chlorophyll values where available. --------------------------------------------------------------------------------- *CALIBRATION $TABLE: CALCULATED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 130 -99 (Pressure Temperature:Primary Conductivity:Primary) () $END $TABLE: CORRECTED CHANNELS !Name Units Fmla Pad Coefficients !---------------------- --------------- ---- ------ ------------ Temperature:Primary 'deg C (ITS90)' 10 -99 () (-0.2E-02 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (0.377E-01 1.0208) Salinity:T0:C0 PSS-78 10 -99 () (0.4E-02 1) Salinity:T1:C1 PSS-78 10 -99 () (0.2E-02 1) $END !--1--- ---2---- --3-- ---4--- --5--- --6--- ---7---- --8--- --9-- -10- !Pressu Temperat Trans Fluores PAR PAR1 Salinity Oxygen Oxyge Numb !re ure: missi cence: :T1:C1 : n: er_o ! Secondar vity URU: Dissol Disso ~bin ! y Seapoin ved: lved: _rec ! t SBE SBE ords !------ -------- ----- ------- ------ ------ -------- ------ ----- ---- *END OF HEADER 2.9 11.1880 34.0 1.977 193.6 172.7 32.3295 6.87 299.3 10 4.2 11.1670 33.7 1.151 108.5 108.1 32.3425 6.91 301.2 12 5.0 11.1160 33.6 1.649 91.2 88.7 32.3463 6.87 299.4 18 6.0 10.9970 32.8 1.771 71.3 69.7 32.3626 6.81 296.6 18 7.0 10.8330 33.5 2.556 55.4 54.1 32.3739 6.64 289.1 21 8.0 10.7360 33.8 2.858 43.8 42.4 32.3934 6.34 276.1 23 9.0 10.4390 36.2 2.688 34.1 33.0 32.4560 5.90 256.8 27 10.0 9.7190 40.9 2.454 26.6 25.6 32.6059 5.55 241.6 24 11.0 9.5260 41.7 2.510 21.0 20.3 32.6415 5.37 234.0 19 12.0 9.4320 41.2 2.501 17.3 16.8 32.6724 5.24 228.0 14 13.0 9.2860 43.4 2.221 14.4 14.0 32.7231 5.15 224.1 14 14.0 9.2640 44.4 2.428 12.3 12.0 32.7266 5.09 221.5 16 15.0 9.2580 44.5 2.892 10.8 10.4 32.7264 5.03 218.9 20 16.0 9.2400 45.2 2.178 9.4 9.0 32.7325 4.94 215.3 28 17.0 9.2090 46.1 1.850 8.1 7.8 32.7462 4.86 211.7 23 18.0 9.1170 46.9 1.991 7.1 6.9 32.7875 4.79 208.5 17 19.0 9.0730 47.8 2.099 6.3 6.2 32.8073 4.74 206.4 14 20.0 9.0320 47.9 2.147 5.7 5.6 32.8243 4.70 204.8 16 21.0 8.9480 48.4 1.652 5.2 5.0 32.8588 4.67 203.5 23 21.9 8.9230 49.1 1.615 4.9 4.7 32.8689 4.63 201.8 28 23.1 8.9120 49.7 1.335 4.8 4.6 32.8770 4.56 198.6 29 24.0 8.8710 50.2 1.211 4.5 4.3 32.8953 4.51 196.5 27 25.0 8.8080 50.8 1.102 4.1 4.0 32.9258 4.46 194.3 29 26.0 8.7720 51.0 0.991 3.9 3.8 32.9434 4.41 192.0 40 27.0 8.7450 51.4 0.959 3.9 3.7 32.9577 4.36 189.8 30 28.0 8.6880 52.5 0.958 3.6 3.5 32.9849 4.34 189.0 28 29.0 8.6800 52.1 0.894 3.2 3.1 32.9895 4.30 187.1 20 29.9 8.6630 52.4 0.795 3.2 3.1 32.9984 4.26 185.6 24 31.0 8.6310 52.6 0.880 3.0 3.0 33.0141 4.25 185.0 19 32.0 8.6140 52.7 0.930 2.8 2.7 33.0215 4.25 184.9 22 33.1 8.6060 52.7 0.890 2.5 2.4 33.0260 4.18 181.9 17 34.0 8.5790 52.7 0.730 2.4 2.3 33.0394 4.13 179.6 22 35.0 8.4600 53.4 0.676 2.2 2.2 33.0984 4.09 178.1 17 36.0 8.4030 53.5 0.640 2.1 2.0 33.1243 4.08 177.4 18 37.1 8.3300 53.9 0.590 1.9 1.8 33.1592 4.04 176.0 30 38.0 8.2850 53.8 0.556 1.8 1.7 33.1823 3.98 173.3 23 39.0 8.2420 54.3 0.522 1.7 1.6 33.2025 3.94 171.4 29 40.0 8.2030 54.5 0.489 1.6 1.6 33.2230 3.91 170.3 21 41.0 8.1880 54.2 0.471 1.4 1.4 33.2306 3.90 169.5 23 41.9 8.1690 54.3 0.435 1.3 1.3 33.2414 3.88 169.0 32 42.9 8.1570 54.3 0.432 1.3 1.2 33.2477 3.85 167.4 34 44.0 8.1460 54.6 0.392 1.2 1.1 33.2537 3.83 166.5 21 45.0 8.1140 54.6 0.444 1.1 1.1 33.2709 3.80 165.4 18 45.9 8.0550 54.6 0.446 1.0 1.0 33.3018 3.80 165.4 19