*2016/09/13 09:19:02.46 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2016/05/29 13:13:04.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 41 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 6B423513 NUMBER OF CHANNELS : 10 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 3.113 43.652 2 Temperature:Secondary 'deg C (ITS90)' 9.5875 11.6654 3 Transmissivity %/metre 29.4 53.5 4 Fluorescence:URU:Seapoint mg/m^3 0.422 6.233 5 PAR uE/m^2/sec 0.2E-02 98.269 6 PAR1 uE/m^2/sec 0.15E-01 91.098 7 Salinity:T1:C1 PSS-78 31.6747 32.5265 8 Oxygen:Dissolved:SBE mL/L 4.566 6.877 9 Oxygen:Dissolved:SBE umol/kg 198.8504 299.7924 10 Number_of_bin_records n/a 13 43 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 6 F ' ' 1 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 7 F ' ' 1 6 -99 ' ' 7 F ' ' 1 7 -99 ' ' 9 F ' ' 4 8 -99 ' ' 7 F ' ' 2 9 -99 ' ' 6 F ' ' 1 10 -99 ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2016-47\Pro $END *ADMINISTRATION MISSION : 2016-47 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : La Perouse Zooplankton Monitoring SCIENTIST : Yelland D. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : WCVI STATION : LG01 EVENT NUMBER : 81 LATITUDE : 49 20.51000 N ! (deg min) LONGITUDE : 126 34.99000 W ! (deg min) WATER DEPTH : 52 ALTIMETER (M) : 9.35 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 LOCATION : Mid-ship ! custom item $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------------------- -------------- ---------- Temperature ' ' 2106 Conductivity ' ' 2280 'Pressure:Digiquartz with TC' ' ' 0443 Temperature:2 ' ' 2663 Conductivity:2 ' ' 2754 'Oxygen:SBE 43' ' ' 0997 Fluorometer:Seapoint ' ' 3640 'Transmissometer:WET Labs C-Star' ' ' 1185DR Altimeter ' ' 62354 PAR/Irradiance:Biospherical/Licor ' ' 70613 PAR/Irradiance:Biospherical/Licor:2 ' ' 4615 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.23.2 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.5 2016/08/05 12:12:06 8685 8685 CLEAN 5.2.1 2016/08/05 12:21:02 8685 8685 SHIFTDAT 3.4 2016/08/09 10:29:46 8685 8685 SHIFTDAT 3.4 2016/08/09 11:23:09 8685 8685 SHIFTDAT 3.4 2016/08/09 11:42:33 8685 8685 DELETE 6.3 2016/08/09 11:51:16 8685 1349 CTDEDIT 5.0.4 2016/08/11 15:06:23 1349 1134 CALIB 11.8.1 2016/08/19 16:22:26 1134 1134 CALIB 11.8.1 2016/08/19 16:27:19 1134 1134 FILTERS 4.3 2016/08/19 16:32:30 1134 1134 BINAVE 4.2 2016/08/19 16:36:44 1134 41 REMOVECH 8.2 2016/08/23 11:33:24 41 41 CHGUNITS 3.1 2016/08/23 14:15:29 41 41 REORDER 1.3.1 2016/08/23 14:16:14 ? ? HDREDIT2 3.0.2 2016/08/23 14:19:06 ? ? HDREDIT2 3.0.2 2016/09/13 09:19:02 ? ? $END $REMARKS -CLEAN functions: 2016/08/05 12:13:30 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.40 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.60 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 33.89 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2016/08/11 15:06:23 215 records were deleted in this editing session. 20 changes in channel Salinity:T1:C1 -CALIB parameters: 2016/08/19 16:22:26 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Salinity is computed Calibration file = P:\Cruise_Data_Processing\2016-47\Processing\doc\2016-47-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 3 Temperature:Primary deg C (IT 10 -0.2000000E-02 0.1000000E+01 17 Oxygen:Dissolved:SBE mL/L 10 0.3770000E-01 0.1020800E+01 Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 15 Salinity:T0:C0 PSS-78 130 Pressure Temperature:Primary Conductivity:Primary -CALIB parameters: 2016/08/19 16:27:19 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2016-47\Processing\doc\2016-47-recal2.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 15 Salinity:T0:C0 PSS-78 10 0.4000000E-02 0.1000000E+01 16 Salinity:T1:C1 PSS-78 10 0.2000000E-02 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2016/08/23 11:33:24 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Altimeter [metres] Descent_Rate [m/s] Status:Pump Salinity:T0:C0 [PSS-78] Flag -CHANGE units: Temperature reference channel: Temp* Salinity reference channel: Sal* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2016/08/23 14:19:06 Applied edit header: P:\Cruise_Data_Processing\2016-47\Processing\doc\2016-47-hdr.txt Channel 1: Pressure [decibar] Format: F11.2 ==> F7.1 Channel 5: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 8: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 2: Temperature:Secondary [deg C (ITS90)] Format: F8.3 ==> F9.4 Channel 6: PAR1 [uE/m^2/sec] Name: PAR:1 ==> PAR1 Format: F11.3 ==> F7.1 Channel 10: Number_of_bin_records [n/a] Pad: ' ' ==> -99 -HEADER EDITS: 2016/09/13 09:19:02 Applied edit header: P:\Cruise_Data_Processing\Temp\2016-47-temp\CTD\2016-47-HDR2.TXT $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\CTD Data\2016-47\2016-47-0081.hex Software Version Seasave V 7.23.2 Temperature SN = 2106 Conductivity SN = 2280 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = May 29 2016 13:15:17 NMEA Latitude = 49 20.51 N NMEA Longitude = 126 34.99 W NMEA UTC (Time) = May 29 2016 13:13:04 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Mission: 2016-47 Ship: J.P. Tully Station: LG01 Depth: 52 System UTC = May 29 2016 13:15:17 # nquan = 18 # nvalues = 8685 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = CStarTr0: Beam Transmission, WET Labs C-Star [%] # name 7 = flSP: Fluorescence, Seapoint # name 8 = sbeox0V: Oxygen raw, SBE 43 [V] # name 9 = par: PAR/Irradiance, Biospherical/Licor # name 10 = par1: PAR/Irradiance, Biospherical/Licor, 2 # name 11 = altM: Altimeter [m] # name 12 = dz/dtM: Descent Rate [m/s] # name 13 = pumps: Pump Status # name 14 = sal00: Salinity, Practical [PSU] # name 15 = sal11: Salinity, Practical, 2 [PSU] # name 16 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 1 # name 17 = flag: flag # span 0 = 1, 8685 # span 1 = 2.188, 43.890 # span 2 = 9.5880, 11.6722 # span 3 = 9.5856, 11.6741 # span 4 = 3.531010, 3.631518 # span 5 = 3.531086, 3.632221 # span 6 = 58.5946, 86.0691 # span 7 = 3.2967e-01, 1.1502e+01 # span 8 = 2.3942, 3.4139 # span 9 = 1.0000e-12, 2.5989e+02 # span 10 = 1.1588e-02, 1.7077e+02 # span 11 = 0.00, 53.53 # span 12 = -1.263, 1.200 # span 13 = 0, 1 # span 14 = 31.6407, 32.5236 # span 15 = 31.6633, 32.5268 # span 16 = 4.3892, 6.7360 # span 17 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = May 29 2016 13:13:04 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 17-Dec-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14703785e-003 # 6.31044927e-004 # 2.13121431e-005 # 2.18594910e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2280 # 19-Dec-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.00904009e+001 # 1.35149315e+000 # -1.84720682e-003 # 1.90856808e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0443 # 17-Dec-14 # -4.435292e+004 # -1.635794e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993627e+001 # -3.271008e-004 # 3.759160e-006 # 1.565300e-009 # 0.99991613 # -0.54760 # 0.000000e+000 # 1.282462e-002 # -8.599824e+000 # # # # # # 2663 # 15-Jan-15 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36565531e-003 # 6.42337654e-004 # 2.40578991e-005 # 2.42263656e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2754 # 19-Dec-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.05920237e+001 # 1.61356129e+000 # -1.94911294e-003 # 2.41671700e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0997 # 17-Jan-15 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.0785e-001 # -0.6967 # -3.5082e-003 # 1.2934e-004 # -1.8411e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.6200 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 3640 # # # 2 # 0.000 # # # # # # 1185DR # APR 27. 2016 # 19.3479 # -1.1028 # 0.250 # # # # # # # # # 62354 # # 15.000 # 0.000 # # # # # # # # # 70613 # 03/21/16 # 1.00000000 # 0.00000000 # 11876484560.57000000 # 1.00000000 # -0.08460813 # # # # # # 4615 # 16-Mar-2011 # 1.00000000 # 0.00000000 # 3367003367.00000000 # 1.00000000 # -0.40341896 # # # # datcnv_date = Aug 05 2016 11:13:45, 7.23.2 [datcnv_vars = 14] # datcnv_in = P:\Cruise_Data_Processing\2016-47\RAW\CTD\2016-47-0081.hex P:\Crui se_Data_Processing\2016-47\Processing\doc\2016-47-ctd2.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Aug 05 2016 11:35:19, 7.23.2 # wildedit_in = P:\Cruise_Data_Processing\2016-47\Processing\convert\2016-47-008 1.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Aug 05 2016 11:40:33, 7.23.2 # alignctd_in = P:\Cruise_Data_Processing\2016-47\Processing\wildedit\2016-47-00 81.cnv # alignctd_adv = sbeox0V 3.000 # celltm_date = Aug 05 2016 11:46:07, 7.23.2 # celltm_in = P:\Cruise_Data_Processing\2016-47\Processing\align\2016-47-0081.cn v # celltm_alpha = 0.0245, 0.0245 # celltm_tau = 9.5000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Aug 05 2016 11:56:25, 7.23.2 [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2016-47\Processing\celltm\2016-47-0081.c nv P:\Cruise_Data_Processing\2016-47\Processing\doc\2016-47-ctd2.XMLCON # derive_time_window_docdt = seconds: 1 # derive_ox_tau_correction = yes # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove records corrupted by shed wakes and to clean salinity. --------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Transmissivity, Fluorescence and PAR data are nominal and unedited except that some records were removed in editing temperature and salinity. For details on how the transmissivity calibration parameters were calculated see the document in folder "\cruise_data\documents\transmissivity". Dissolved oxygen was calibrated using the method described in SeaBird Application Note #64-2, June 2012 revision, except that a small offset in the fit was allowed. Downcast Oxygen:Dissolved:SBE data are considered, very roughly, to be: ±0.4 mL/L from 0 to 100db ±0.2 mL/L from 100db to 300db ±0.1 mL/L from 300db to 800db ±0.02 mL/L below 800db There were 2 Biospherical/Licor PAR sensors. The one identified as PAR refers to a new sensor (S/N 70613) and PAR1 refers to an older sensor (S/N 4615). For details on the processing see document: 2016-47_Processing_Report.doc. --------------------------------------------------------------------------------- NOTE: While the CTD fluorescence data are expressed in concentration units, they do not always compare well to extracted chlorophyll samples, particularly for casts far from shore. It is recommended that users check extracted chlorophyll values where available. --------------------------------------------------------------------------------- *CALIBRATION $TABLE: CALCULATED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 130 -99 (Pressure Temperature:Primary Conductivity:Primary) () $END $TABLE: CORRECTED CHANNELS !Name Units Fmla Pad Coefficients !---------------------- --------------- ---- ------ ------------ Temperature:Primary 'deg C (ITS90)' 10 -99 () (-0.2E-02 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (0.377E-01 1.0208) Salinity:T0:C0 PSS-78 10 -99 () (0.4E-02 1) Salinity:T1:C1 PSS-78 10 -99 () (0.2E-02 1) $END !--1--- ---2---- --3-- ---4--- --5--- --6--- ---7---- --8--- --9-- -10- !Pressu Temperat Trans Fluores PAR PAR1 Salinity Oxygen Oxyge Numb !re ure: missi cence: :T1:C1 : n: er_o ! Secondar vity URU: Dissol Disso ~bin ! y Seapoin ved: lved: _rec ! t SBE SBE ords !------ -------- ----- ------- ------ ------ -------- ------ ----- ---- *END OF HEADER 3.1 11.6470 30.9 4.623 98.3 91.1 31.6755 6.87 299.5 35 3.7 11.6450 30.3 5.045 63.1 61.4 31.6747 6.87 299.4 18 6.2 11.6510 30.5 6.059 30.4 29.1 31.6761 6.86 299.1 18 7.0 11.6520 30.7 6.164 22.4 21.4 31.6747 6.87 299.6 30 8.0 11.6540 29.4 6.233 15.8 14.8 31.6750 6.88 299.8 41 9.0 11.6600 30.9 5.398 11.6 11.0 31.6782 6.88 299.7 43 10.0 11.6640 30.7 6.071 8.3 7.9 31.6811 6.84 298.2 36 11.0 11.6650 33.7 5.825 6.2 5.9 31.6989 6.73 293.3 31 12.0 11.6100 35.7 4.992 4.8 4.6 31.7542 6.61 288.0 33 13.0 11.5760 36.6 4.310 3.8 3.6 31.7705 6.58 286.9 43 14.0 11.5530 35.9 4.175 2.8 2.7 31.7808 6.51 283.6 35 15.0 11.4530 37.5 4.203 2.1 2.0 31.8136 6.42 280.0 30 16.0 11.3340 37.1 4.130 1.7 1.6 31.8408 6.37 277.5 42 16.9 11.2930 36.7 3.825 1.5 1.4 31.8527 6.31 275.0 35 18.0 11.2600 37.9 4.443 1.2 1.1 31.8629 6.24 271.8 23 19.0 11.2200 37.5 3.888 0.9 0.9 31.8793 6.14 267.7 20 20.0 11.1240 39.8 3.747 0.7 0.6 31.9157 6.02 262.5 22 21.0 11.0170 39.2 3.521 0.5 0.5 31.9489 5.89 256.8 27 22.0 10.7250 42.3 3.072 0.4 0.4 32.0510 5.73 249.7 32 23.0 10.5920 47.2 2.686 0.4 0.4 32.0986 5.54 241.2 29 24.0 10.4020 50.3 1.898 0.3 0.3 32.1659 5.36 233.7 23 25.0 10.1960 52.5 1.278 0.3 0.3 32.2441 5.23 227.9 21 26.0 10.0480 52.7 1.145 0.2 0.2 32.3021 5.14 224.0 21 27.0 9.9830 52.6 1.189 0.2 0.2 32.3218 5.06 220.3 25 28.0 9.9360 53.0 0.871 0.1 0.1 32.3452 4.99 217.2 30 29.0 9.9220 53.5 0.770 0.1 0.1 32.3552 4.93 214.9 27 30.0 9.8940 53.5 0.762 0.1 0.1 32.3713 4.89 213.1 24 31.0 9.8600 52.3 0.881 0.1 0.1 32.3826 4.84 210.9 25 32.0 9.8340 53.2 0.657 0.1 0.1 32.3948 4.80 209.1 23 33.0 9.7640 53.2 0.587 0.1 0.1 32.4239 4.76 207.1 22 34.0 9.7320 52.6 0.661 0.1 0.1 32.4371 4.73 206.1 23 35.0 9.7230 52.1 0.781 0.0 0.1 32.4421 4.72 205.4 30 36.0 9.7150 52.2 0.650 0.0 0.1 32.4478 4.70 204.5 30 37.0 9.6930 51.9 0.528 0.0 0.0 32.4594 4.68 203.7 25 38.0 9.6690 51.8 0.638 0.0 0.0 32.4725 4.64 202.1 22 39.0 9.6400 51.8 0.520 0.0 0.0 32.4907 4.62 201.3 23 40.0 9.6270 51.8 0.491 0.0 0.0 32.4989 4.62 201.0 25 41.0 9.6170 52.0 0.434 0.0 0.0 32.5057 4.61 200.7 27 42.0 9.6050 52.3 0.449 0.0 0.0 32.5136 4.60 200.3 28 42.7 9.6020 51.6 0.426 0.0 0.0 32.5154 4.60 200.2 13 43.6 9.5870 52.1 0.422 0.0 0.0 32.5265 4.57 198.9 19