*2016/09/13 09:18:56.86 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2016/05/26 05:08:00.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 50 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 4EB8E76A NUMBER OF CHANNELS : 10 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 2.063 50.55 2 Temperature:Secondary 'deg C (ITS90)' 8.3417 11.9983 3 Transmissivity %/metre 23.5 53.4 4 Fluorescence:URU:Seapoint mg/m^3 0.362 5.655 5 PAR uE/m^2/sec 0 0.213 6 PAR1 uE/m^2/sec 0 0.208 7 Salinity:T1:C1 PSS-78 30.6545 33.2166 8 Oxygen:Dissolved:SBE mL/L 3.725 7.05 9 Oxygen:Dissolved:SBE umol/kg 162.1135 307.5907 10 Number_of_bin_records n/a 4 39 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 6 F ' ' 1 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 7 F ' ' 1 6 -99 ' ' 7 F ' ' 1 7 -99 ' ' 9 F ' ' 4 8 -99 ' ' 7 F ' ' 2 9 -99 ' ' 6 F ' ' 1 10 -99 ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2016-47\Pro $END *ADMINISTRATION MISSION : 2016-47 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : La Perouse Zooplankton Monitoring SCIENTIST : Yelland D. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : WCVI STATION : LB02 EVENT NUMBER : 7 LATITUDE : 48 39.04000 N ! (deg min) LONGITUDE : 125 2.45000 W ! (deg min) WATER DEPTH : 56 ALTIMETER (M) : 7.01 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 LOCATION : Mid-ship ! custom item $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------------------- -------------- ---------- Temperature ' ' 2106 Conductivity ' ' 2280 'Pressure:Digiquartz with TC' ' ' 0443 Temperature:2 ' ' 2663 Conductivity:2 ' ' 2754 'Oxygen:SBE 43' ' ' 0997 Fluorometer:Seapoint ' ' 3640 'Transmissometer:WET Labs C-Star' ' ' 1185DR Altimeter ' ' 62354 PAR/Irradiance:Biospherical/Licor ' ' 70613 PAR/Irradiance:Biospherical/Licor:2 ' ' 4615 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.23.2 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.5 2016/08/05 12:04:34 10279 10279 CLEAN 5.2.1 2016/08/05 13:25:15 10279 10279 SHIFTDAT 3.4 2016/08/09 10:22:57 10279 10279 SHIFTDAT 3.4 2016/08/09 11:15:38 10279 10279 SHIFTDAT 3.4 2016/08/09 11:35:26 10279 10279 DELETE 6.3 2016/08/09 11:46:23 10279 1296 CTDEDIT 5.0.4 2016/08/09 14:05:02 1296 1032 CALIB 11.8.1 2016/08/19 16:19:43 1032 1032 CALIB 11.8.1 2016/08/19 16:24:32 1032 1032 FILTERS 4.3 2016/08/19 16:29:41 1032 1032 BINAVE 4.2 2016/08/19 16:35:25 1032 50 REMOVECH 8.2 2016/08/23 11:33:21 50 50 CHGUNITS 3.1 2016/08/23 14:15:23 50 50 REORDER 1.3.1 2016/08/23 14:16:08 ? ? HDREDIT2 3.0.2 2016/08/23 14:19:00 ? ? HDREDIT2 3.0.2 2016/09/13 09:18:56 ? ? $END $REMARKS -CLEAN functions: 2016/08/05 13:25:04 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure Insert Pad Values in Channel: Fluorescence:URU:Seapoint [mg/m^3] where channel Fluorescence:URU:Seapoint [mg/m^3] is in the range 14.82 to 15 0 data records in pad range. Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.40 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.60 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 40.84 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2016/08/09 14:05:02 264 records were deleted in this editing session. 17 changes in channel Salinity:T1:C1 -CALIB parameters: 2016/08/19 16:19:43 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Salinity is computed Calibration file = P:\Cruise_Data_Processing\2016-47\Processing\doc\2016-47-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 3 Temperature:Primary deg C (IT 10 -0.2000000E-02 0.1000000E+01 17 Oxygen:Dissolved:SBE mL/L 10 0.3770000E-01 0.1020800E+01 Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 15 Salinity:T0:C0 PSS-78 130 Pressure Temperature:Primary Conductivity:Primary -CALIB parameters: 2016/08/19 16:24:32 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2016-47\Processing\doc\2016-47-recal2.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 15 Salinity:T0:C0 PSS-78 10 0.4000000E-02 0.1000000E+01 16 Salinity:T1:C1 PSS-78 10 0.2000000E-02 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2016/08/23 11:33:21 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Altimeter [metres] Descent_Rate [m/s] Status:Pump Salinity:T0:C0 [PSS-78] Flag -CHANGE units: Temperature reference channel: Temp* Salinity reference channel: Sal* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2016/08/23 14:19:00 Applied edit header: P:\Cruise_Data_Processing\2016-47\Processing\doc\2016-47-hdr.txt Channel 1: Pressure [decibar] Format: F11.2 ==> F7.1 Channel 5: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 8: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 2: Temperature:Secondary [deg C (ITS90)] Format: F8.3 ==> F9.4 Channel 6: PAR1 [uE/m^2/sec] Name: PAR:1 ==> PAR1 Format: F11.3 ==> F7.1 Channel 10: Number_of_bin_records [n/a] Pad: ' ' ==> -99 -HEADER EDITS: 2016/09/13 09:18:56 Applied edit header: P:\Cruise_Data_Processing\Temp\2016-47-temp\CTD\2016-47-HDR2.TXT $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\CTD Data\2016-47\2016-47-0007.hex Software Version Seasave V 7.23.2 Temperature SN = 2106 Conductivity SN = 2280 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = May 26 2016 05:13:46 NMEA Latitude = 48 39.04 N NMEA Longitude = 125 02.45 W NMEA UTC (Time) = May 26 2016 05:08:00 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Mission: 2016-47 Ship: J.P. Tully Station: LB02 Depth: 56 System UTC = May 26 2016 05:13:46 # nquan = 18 # nvalues = 10279 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = CStarTr0: Beam Transmission, WET Labs C-Star [%] # name 7 = flSP: Fluorescence, Seapoint # name 8 = sbeox0V: Oxygen raw, SBE 43 [V] # name 9 = par: PAR/Irradiance, Biospherical/Licor # name 10 = par1: PAR/Irradiance, Biospherical/Licor, 2 # name 11 = altM: Altimeter [m] # name 12 = dz/dtM: Descent Rate [m/s] # name 13 = pumps: Pump Status # name 14 = sal00: Salinity, Practical [PSU] # name 15 = sal11: Salinity, Practical, 2 [PSU] # name 16 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 1 # name 17 = flag: flag # span 0 = 1, 10279 # span 1 = 1.179, 50.841 # span 2 = 8.2095, 12.0913 # span 3 = 8.2203, 12.0995 # span 4 = 3.438337, 3.556603 # span 5 = 3.438190, 3.557777 # span 6 = 61.6893, 85.7147 # span 7 = 3.4066e-01, 6.5861e+00 # span 8 = 2.0035, 3.4884 # span 9 = 1.0000e-12, 3.1736e-01 # span 10 = 1.0000e-12, 2.7727e-01 # span 11 = 0.00, 100.00 # span 12 = -1.344, 1.971 # span 13 = 0, 1 # span 14 = 30.4676, 33.2574 # span 15 = 30.3178, 33.2541 # span 16 = 3.4636, 6.9073 # span 17 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = May 26 2016 05:08:00 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 17-Dec-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14703785e-003 # 6.31044927e-004 # 2.13121431e-005 # 2.18594910e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2280 # 19-Dec-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.00904009e+001 # 1.35149315e+000 # -1.84720682e-003 # 1.90856808e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0443 # 17-Dec-14 # -4.435292e+004 # -1.635794e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993627e+001 # -3.271008e-004 # 3.759160e-006 # 1.565300e-009 # 0.99991613 # -0.54760 # 0.000000e+000 # 1.282462e-002 # -8.599824e+000 # # # # # # 2663 # 15-Jan-15 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36565531e-003 # 6.42337654e-004 # 2.40578991e-005 # 2.42263656e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2754 # 19-Dec-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.05920237e+001 # 1.61356129e+000 # -1.94911294e-003 # 2.41671700e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0997 # 17-Jan-15 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.0785e-001 # -0.6967 # -3.5082e-003 # 1.2934e-004 # -1.8411e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.6200 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 3640 # # # 1 # 0.000 # # # # # # 1185DR # APR 27. 2016 # 19.3479 # -1.1028 # 0.250 # # # # # # # # # 62354 # # 15.000 # 0.000 # # # # # # # # # 70613 # 03/21/16 # 1.00000000 # 0.00000000 # 11876484560.57000000 # 1.00000000 # -0.08460813 # # # # # # 4615 # 16-Mar-2011 # 1.00000000 # 0.00000000 # 3367003367.00000000 # 1.00000000 # -0.40341896 # # # # datcnv_date = Aug 05 2016 11:18:10, 7.23.2 [datcnv_vars = 14] # datcnv_in = P:\Cruise_Data_Processing\2016-47\RAW\CTD\2016-47-0007.hex P:\Crui se_Data_Processing\2016-47\Processing\doc\2016-47-ctd1.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Aug 05 2016 11:32:28, 7.23.2 # wildedit_in = P:\Cruise_Data_Processing\2016-47\Processing\convert\2016-47-000 7.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Aug 05 2016 11:38:26, 7.23.2 # alignctd_in = P:\Cruise_Data_Processing\2016-47\Processing\wildedit\2016-47-00 07.cnv # alignctd_adv = sbeox0V 3.000 # celltm_date = Aug 05 2016 11:44:01, 7.23.2 # celltm_in = P:\Cruise_Data_Processing\2016-47\Processing\align\2016-47-0007.cn v # celltm_alpha = 0.0245, 0.0245 # celltm_tau = 9.5000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Aug 05 2016 12:00:06, 7.23.2 [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2016-47\Processing\celltm\2016-47-0007.c nv P:\Cruise_Data_Processing\2016-47\Processing\doc\2016-47-ctd1.XMLCON # derive_time_window_docdt = seconds: 1 # derive_ox_tau_correction = yes # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove records corrupted by shed wakes and to clean salinity. --------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Transmissivity, Fluorescence and PAR data are nominal and unedited except that some records were removed in editing temperature and salinity. For details on how the transmissivity calibration parameters were calculated see the document in folder "\cruise_data\documents\transmissivity". Dissolved oxygen was calibrated using the method described in SeaBird Application Note #64-2, June 2012 revision, except that a small offset in the fit was allowed. Downcast Oxygen:Dissolved:SBE data are considered, very roughly, to be: ±0.4 mL/L from 0 to 100db ±0.2 mL/L from 100db to 300db ±0.1 mL/L from 300db to 800db ±0.02 mL/L below 800db There were 2 Biospherical/Licor PAR sensors. The one identified as PAR refers to a new sensor (S/N 70613) and PAR1 refers to an older sensor (S/N 4615). For details on the processing see document: 2016-47_Processing_Report.doc. --------------------------------------------------------------------------------- NOTE: While the CTD fluorescence data are expressed in concentration units, they do not always compare well to extracted chlorophyll samples, particularly for casts far from shore. It is recommended that users check extracted chlorophyll values where available. --------------------------------------------------------------------------------- *CALIBRATION $TABLE: CALCULATED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 130 -99 (Pressure Temperature:Primary Conductivity:Primary) () $END $TABLE: CORRECTED CHANNELS !Name Units Fmla Pad Coefficients !---------------------- --------------- ---- ------ ------------ Temperature:Primary 'deg C (ITS90)' 10 -99 () (-0.2E-02 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (0.377E-01 1.0208) Salinity:T0:C0 PSS-78 10 -99 () (0.4E-02 1) Salinity:T1:C1 PSS-78 10 -99 () (0.2E-02 1) $END !--1--- ---2---- --3-- ---4--- --5--- --6--- ---7---- --8--- --9-- -10- !Pressu Temperat Trans Fluores PAR PAR1 Salinity Oxygen Oxyge Numb !re ure: missi cence: :T1:C1 : n: er_o ! Secondar vity URU: Dissol Disso ~bin ! y Seapoin ved: lved: _rec ! t SBE SBE ords !------ -------- ----- ------- ------ ------ -------- ------ ----- ---- *END OF HEADER 2.1 11.9980 23.5 5.648 0.2 0.2 30.6545 7.05 307.6 21 2.8 11.9200 24.8 5.635 0.1 0.1 30.6743 7.03 306.6 17 4.0 11.4660 27.7 5.575 0.0 0.0 30.7365 6.64 289.8 20 5.0 11.5090 29.1 5.655 0.0 0.0 30.7331 6.61 288.1 26 6.0 11.2900 28.9 5.456 0.0 0.0 30.7669 6.57 286.6 34 6.8 11.2460 27.7 5.549 0.0 0.0 30.7720 6.47 282.1 14 8.0 11.0090 30.4 5.511 0.0 0.0 30.8067 6.27 273.6 24 9.0 10.8800 32.3 5.413 0.0 0.0 30.8264 6.16 268.5 21 10.0 10.7300 33.8 5.076 0.0 0.0 30.8461 6.04 263.3 21 11.0 10.6430 34.7 4.842 0.0 0.0 30.8581 5.88 256.4 21 12.0 10.5540 35.9 4.661 0.0 0.0 30.9089 5.69 248.3 22 13.0 10.3230 39.4 4.041 0.0 0.0 31.0207 5.50 239.7 28 14.0 10.1570 41.1 3.447 0.0 0.0 31.1149 5.34 232.9 39 15.0 10.0740 41.5 3.170 0.0 0.0 31.1860 5.20 226.8 27 16.0 9.9160 42.6 2.799 0.0 0.0 31.3121 5.13 223.5 17 17.0 9.8730 44.0 2.517 0.0 0.0 31.3457 5.08 221.2 18 18.0 9.8580 44.3 2.307 0.0 0.0 31.3635 5.04 219.5 18 19.0 9.8330 44.8 2.136 0.0 0.0 31.3818 5.01 218.5 22 20.1 9.8070 45.0 1.947 0.0 0.0 31.3966 4.99 217.5 32 21.0 9.8060 45.1 1.821 0.0 0.0 31.4072 4.97 216.8 36 22.0 9.8030 45.3 1.755 0.0 0.0 31.4124 4.94 215.5 24 23.0 9.8000 45.3 1.741 0.0 0.0 31.4167 4.92 214.5 20 24.0 9.7940 45.2 1.706 0.0 0.0 31.4220 4.88 212.8 18 25.0 9.7740 45.4 1.668 0.0 0.0 31.4384 4.83 210.7 20 26.1 9.6950 46.1 1.578 0.0 0.0 31.5128 4.77 207.7 31 27.0 9.6270 46.6 1.406 0.0 0.0 31.5783 4.67 203.7 38 28.0 9.5230 47.0 1.232 0.0 0.0 31.6732 4.56 198.5 26 29.0 9.4320 47.4 1.117 0.0 0.0 31.7580 4.46 194.4 22 30.0 9.3280 48.1 0.967 0.0 0.0 31.8422 4.36 190.1 21 31.0 9.2040 48.3 0.838 0.0 0.0 31.9634 4.28 186.4 22 32.0 9.1090 48.4 0.725 0.0 0.0 32.0600 4.21 183.4 21 33.0 9.0310 48.6 0.673 0.0 0.0 32.1456 4.17 181.5 19 34.0 8.9810 48.8 0.589 0.0 0.0 32.1978 4.14 180.4 19 35.1 8.9610 48.6 0.547 0.0 0.0 32.2214 4.11 178.8 27 36.0 8.9310 48.8 0.521 0.0 0.0 32.2632 4.05 176.6 17 37.0 8.9020 48.8 0.495 0.0 0.0 32.3030 4.01 174.5 21 38.0 8.8940 48.8 0.473 0.0 0.0 32.3120 4.00 174.0 14 39.0 8.8740 48.9 0.440 0.0 0.0 32.3427 3.99 173.9 12 40.0 8.8520 49.0 0.453 0.0 0.0 32.3796 3.98 173.5 13 41.0 8.8320 49.1 0.429 0.0 0.0 32.4045 3.99 173.6 17 41.7 8.8130 48.9 0.431 0.0 0.0 32.4174 4.01 174.5 9 43.2 8.7950 48.8 0.435 0.0 0.0 32.4556 3.88 169.0 10 44.0 8.7580 49.6 0.400 0.0 0.0 32.5041 3.87 168.3 14 45.0 8.7030 49.6 0.408 0.0 0.0 32.5991 3.88 168.9 13 46.0 8.6510 49.9 0.453 0.0 0.0 32.7317 3.89 169.5 14 47.0 8.6490 50.0 0.512 0.0 0.0 32.8367 3.90 169.7 16 47.7 8.6260 50.5 0.480 0.0 0.0 32.9013 3.90 169.7 13 49.3 8.4340 51.7 0.468 0.0 0.0 33.1451 3.74 162.6 9 50.0 8.3860 52.6 0.472 0.0 0.0 33.1847 3.73 162.1 25 50.5 8.3420 53.4 0.362 0.0 0.0 33.2166 3.75 163.0 4