*2016/10/18 08:52:38.76 *IOS HEADER VERSION 2.0 2016/04/28 2016/06/13 IVF16 *FILE START TIME : UTC 2016/06/24 15:02:49.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 41 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 7C1D0404 NUMBER OF CHANNELS : 11 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 2.489 41.778 2 Temperature:Secondary 'deg C (ITS90)' 10.3602 15.8845 3 Transmissivity %/metre 30 56.8 4 Fluorescence:URU:Seapoint mg/m^3 0.23 2.527 5 PAR uE/m^2/sec 0.83E-01 417.71 6 PAR:Reference uE/m^2/sec 840.35 880.09 7 pH:SBE:Nominal n/a 7.753 8.433 8 Salinity:T1:C1 PSS-78 25.9785 28.6357 9 Oxygen:Dissolved:SBE mL/L 2.554 6.543 10 Oxygen:Dissolved:SBE umol/kg 111.571 286.4227 11 Number_of_bin_records n/a 1 104 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 6 F ' ' 1 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 7 F ' ' 1 6 -99 ' ' 7 F ' ' 1 7 -99 ' ' 8 F ' ' 3 8 -99 ' ' 9 F ' ' 4 9 -99 ' ' 7 F ' ' 2 10 -99 ' ' 6 F ' ' 1 11 -99 ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2016-46\Pro $END *ADMINISTRATION MISSION : 2016-46 AGENCY : 'WVL, Marine Environment and Habitat Science,' CONTINUED : ' Vancouver, B.C.' COUNTRY : Canada PROJECT : Baynes Sound Ecosystem Study SCIENTIST : Sutherland T. PLATFORM : Vector *LOCATION GEOGRAPHIC AREA : Baynes Sound STATION : BS5 EVENT NUMBER : 22 LATITUDE : 49 35.84000 N ! (deg min) LONGITUDE : 124 51.56000 W ! (deg min) WATER DEPTH : 45 ALTIMETER (M) : 2.69 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0550 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------------- -------------- ---------- Temperature ' ' 4484 Conductivity ' ' 1766 'Pressure:Digiquartz with TC' ' ' 0550 Temperature:2 ' ' 4054 Conductivity:2 ' ' 3531 'Oxygen:SBE 43' ' ' 1119 Fluorometer:Seapoint ' ' 3865 'Transmissometer:WET Labs C-Star' ' ' 1396DR Altimeter ' ' 1252 pH ' ' 0692 PAR/Irradiance:Biospherical/Licor ' ' '4565 QSP200L4S' Unavailable ' ' ' ' 'SPAR/Surface Irradiance' ' ' 20518 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.23.1 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.5.2 2016/10/12 13:06:04 15740 15740 CLEAN 5.2.1 2016/10/12 13:09:20 15740 15740 MERGEHDR 1.3 2016/10/12 15:02:12 15740 15740 SHIFTDAT 3.4 2016/10/13 08:43:30 15740 15740 SHIFTDAT 3.4 2016/10/13 10:19:17 15740 15740 SHIFTDAT 3.4 2016/10/13 10:28:36 15740 15740 SHIFTDAT 3.4 2016/10/13 10:30:12 15740 15740 DELETE 6.3 2016/10/17 10:24:34 15740 2282 CTDEDIT 5.2.3 2016/10/17 13:55:15 2282 2249 CALIB 11.9 2016/10/17 17:07:28 2249 2249 FILTERS 4.3 2016/10/17 17:08:01 2249 2249 BINAVE 4.2 2016/10/17 17:28:23 2249 41 REMOVECH 8.2 2016/10/18 08:33:16 41 41 CHGUNITS 3.1.1 2016/10/18 08:33:59 41 41 REORDER 1.3.1 2016/10/18 08:34:17 ? ? HDREDIT2 3.0.2 2016/10/18 08:52:38 ? ? $END $REMARKS -CLEAN functions: 2016/10/12 13:09:06 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.40 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 70.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 32.11 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.2.3 2016/10/17 13:55:15 33 records were deleted in this editing session. 9 changes in channel Salinity:T1:C1 -CALIB parameters: 2016/10/17 17:07:28 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2016-46\Processing\doc\2016-46-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 18 Oxygen:Dissolved:SBE mL/L 10 0.0000000E+00 0.1016800E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2016/10/18 08:33:16 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Altimeter [metres] Descent_Rate [m/s] Status:Pump Salinity:T0:C0 [PSS-78] Flag -CHANGE units: Temperature reference channel: Temperature:Secondary Salinity reference channel: Salinity:T1:C1 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2016/10/18 08:52:38 Applied edit header: P:\Cruise_Data_Processing\2016-46\Processing\doc\2016-46-HDR.TXT Channel 1: Pressure [decibar] Format: F11.2 ==> F7.1 Channel 5: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 9: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 6: PAR:Reference [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 7: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a Channel 11: Number_of_bin_records [n/a] Pad: ' ' ==> -99 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\CTD Data\2016-47\2016-47-0022.hex Software Version Seasave V 7.23.1 Temperature SN = 4484 Conductivity SN = 1766 Number of Bytes Per Scan = 40 Number of Voltage Words = 5 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jun 24 2016 08:04:25 NMEA Latitude = 49 35.84 N NMEA Longitude = 124 51.56 W NMEA UTC (Time) = Jun 24 2016 15:02:49 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 surface PAR voltage added to scan A/D offset = 5 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds advance voltage 6 0.000 seconds advance voltage 7 0.000 seconds S> Vector: 2016-47 Station: BS5 Depth: System UTC = Jun 24 2016 15:04:25 # nquan = 19 # nvalues = 15740 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = CStarTr0: Beam Transmission, WET Labs C-Star [%] # name 7 = flSP: Fluorescence, Seapoint # name 8 = sbeox0V: Oxygen raw, SBE 43 [V] # name 9 = par: PAR/Irradiance, Biospherical/Licor # name 10 = spar: SPAR/Surface Irradiance # name 11 = ph: pH # name 12 = altM: Altimeter [m] # name 13 = dz/dtM: Descent Rate [m/s] # name 14 = pumps: Pump Status # name 15 = sal00: Salinity, Practical [PSU] # name 16 = sal11: Salinity, Practical, 2 [PSU] # name 17 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 1 # name 18 = flag: flag # span 0 = 1, 15740 # span 1 = 1.676, 42.106 # span 2 = 10.3196, 15.9799 # span 3 = 10.3203, 15.9820 # span 4 = 3.206604, 3.434296 # span 5 = 3.206880, 3.434018 # span 6 = 73.2611, 86.8743 # span 7 = 2.0757e-01, 2.9304e+00 # span 8 = 1.2637, 2.9451 # span 9 = 7.4462e-02, 6.5336e+02 # span 10 = 8.3042e+02, 1.1662e+03 # span 11 = 7.687, 8.446 # span 12 = 0.00, 100.00 # span 13 = -0.618, 0.510 # span 14 = 0, 1 # span 15 = 25.7878, 28.6451 # span 16 = 25.5852, 28.6609 # span 17 = 2.2227, 6.5612 # span 18 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jun 24 2016 15:02:49 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 4484 # 18-Dec-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.39931830e-003 # 6.40333195e-004 # 2.14332102e-005 # 1.81777421e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1766 # 20-Aug-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.12823288e+000 # 4.88293788e-001 # -6.13168477e-004 # 5.30399930e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0550 # 17-Dec-14 # -4.232943e+004 # 1.065076e-001 # 1.464900e-002 # 3.694200e-002 # 0.000000e+000 # 3.041883e+001 # -3.536199e-004 # 4.388420e-006 # 2.583800e-009 # 1.00002764 # 0.67335 # 0.000000e+000 # 1.286170e-002 # -9.445820e+000 # # # # # # 4054 # 20-Aug-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.38634996e-003 # 6.44413405e-004 # 2.32318430e-005 # 2.13707967e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3531 # 06-Feb-13 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.02073624e+001 # 1.56180514e+000 # -2.18950789e-003 # 2.53511714e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 1119 # 19-Dec-15 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.6004e-001 # -0.5129 # -3.1802e-003 # 1.7259e-004 # -3.0507e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.8700 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 3865 # # # 2 # 0.000 # # # # # # 1396DR # Feb 2nd 2016 # 19.3228 # -0.0193 # 0.250 # # # # # # # # # 1252 # # 15.000 # 0.000 # # # # # # # # # 0692 # 12-Jan-16 # 4.6015 # 2.5353 # # # # # # 4565 QSP200L4S # 16-Mar-2011 # 1.00000000 # 0.00000000 # 4115226337.44999980 # 1.00000000 # -0.36780000 # # # # # # # # # 20518 # 21-MAR-2016 # 1627.06600000 # 1.00000000 # # # # datcnv_date = Oct 06 2016 10:16:38, 7.23.2 [datcnv_vars = 15] # datcnv_in = P:\Cruise_Data_Processing\2016-46\RAW\CTD\2016-46-0022.hex P:\Crui se_Data_Processing\2016-46\Processing\doc\2016-46-ctd.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Oct 06 2016 13:30:02, 7.23.2 # wildedit_in = P:\Cruise_Data_Processing\2016-46\Processing\convert\2016-46-002 2.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Oct 12 2016 12:16:23, 7.23.2 # alignctd_in = P:\Cruise_Data_Processing\2016-46\Processing\wildedit\2016-46-00 22.cnv # alignctd_adv = sbeox0V 1.500 # celltm_date = Oct 12 2016 12:17:19, 7.23.2 # celltm_in = P:\Cruise_Data_Processing\2016-46\Processing\align\2016-46-0022.cn v # celltm_alpha = 0.0245, 0.0245 # celltm_tau = 9.5000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Oct 12 2016 12:18:27, 7.23.2 [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2016-46\Processing\celltm\2016-46-0022.c nv P:\Cruise_Data_Processing\2016-46\Processing\doc\2016-46-ctd.XMLCON # derive_time_window_docdt = seconds: 1 # derive_ox_tau_correction = yes # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some records near the top and bottom of the cast; salinity was cleaned. --------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Transmissivity, Fluorescence, PAR and PAR:Reference data are nominal and unedited except that some records were removed in editing temperature and salinity. The pH channel was removed from casts #95-104 due to sensor malfunction. For details on how the transmissivity calibration parameters were calculated see the document in folder "\cruise_data\documents\transmissivity". NOTE: While the CTD fluorescence data are expressed in concentration units, they do not always compare well to extracted chlorophyll samples, particularly for casts far from shore. It is recommended that users check extracted chlorophyll values where available. Dissolved oxygen was calibrated using the method described in SeaBird Application Note #64-2, June 2012 revision, except that a small offset in the fit was allowed. The SBE DO sensor has a fairly long response time so data accuracy is not as high when it is in motion as it is during stops for bottles. This will be especially true when vertical DO gradients are large. To get an estimate of the accuracy of the SBE DO data during downcasts (after recalibration) a rough comparison was made between downcast SBE DO and upcast titrated samples. Some of the difference will be due to problems with flushing of Niskin bottles and/or analysis errors, so the following statement likely underestimates SBE DO accuracy. Downcast (CTD files) Oxygen:Dissolved:SBE data are considered, very roughly, to be: ±0.3 mL/L from 0db to 100db ±0.1 mL/L from 100db to 250db ±0.02 mL/L below 250db WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see document: 2016-46_Processing_Report.doc. --------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0 1.0168) $END !--1--- ---2---- --3-- ---4--- --5--- --6--- ---7--- ---8---- --9--- --10- -11- !Pressu Temperat Trans Fluores PAR PAR: pH:SBE: Salinity Oxygen Oxyge Numb !re ure: missi cence: Refere Nominal :T1:C1 : n: er_o ! Secondar vity URU: nce Dissol Disso ~bin ! y Seapoin ved: lved: _rec ! t SBE SBE ords !------ -------- ----- ------- ------ ------ ------- -------- ------ ----- ---- *END OF HEADER 2.5 15.8845 31.9 2.320 417.7 880.1 8.433 25.9785 6.53 285.9 1 3.0 15.8389 31.4 2.359 352.0 880.1 8.431 26.2435 6.48 283.9 56 4.0 15.7159 31.2 2.430 233.9 878.8 8.432 26.5905 6.47 283.6 49 5.0 15.2943 30.6 2.490 160.9 878.1 8.429 26.9937 6.50 284.4 50 6.0 15.2142 30.0 2.527 111.6 878.1 8.428 27.0576 6.54 286.4 51 7.0 14.9039 31.3 2.461 77.4 876.7 8.429 27.3037 6.48 283.7 51 8.0 14.2439 33.3 1.939 54.9 876.1 8.427 27.5844 6.31 276.1 50 9.0 13.6331 38.0 1.378 40.2 874.8 8.422 27.7907 5.97 261.2 51 10.0 13.2841 42.6 1.011 30.1 874.1 8.406 27.9068 5.77 252.5 51 11.0 12.9783 45.9 0.753 23.1 873.4 8.381 28.0048 5.58 244.1 51 12.0 12.7726 49.5 0.604 18.3 872.1 8.353 28.0530 5.32 232.6 51 13.0 12.4148 51.6 0.478 14.9 872.0 8.328 28.1464 4.93 215.4 52 14.0 12.2423 53.2 0.458 12.1 870.1 8.300 28.1861 4.78 208.8 52 15.0 12.0395 54.3 0.416 9.9 870.1 8.271 28.2281 4.58 200.3 51 16.0 11.9265 55.0 0.449 8.2 868.7 8.241 28.2505 4.45 194.4 52 17.0 11.7819 55.4 0.387 6.7 868.2 8.197 28.2820 4.30 188.0 52 18.0 11.6796 56.1 0.355 5.6 867.0 8.156 28.3111 4.21 184.2 52 19.0 11.4923 56.3 0.348 4.6 866.2 8.128 28.3619 4.05 176.9 51 20.0 11.3977 56.8 0.312 3.9 865.4 8.099 28.4552 4.18 182.7 52 21.0 11.4503 56.3 0.295 3.2 864.2 8.079 28.5087 4.38 191.2 47 22.0 11.4638 56.4 0.290 2.7 862.6 8.067 28.5297 4.44 193.9 50 23.0 11.4310 56.3 0.315 2.3 862.2 8.057 28.5392 4.39 191.9 53 24.0 11.4132 56.2 0.283 2.0 860.2 8.050 28.5495 4.37 190.9 53 25.0 11.2219 55.8 0.290 1.7 858.8 8.045 28.5611 4.13 180.6 52 26.0 11.0888 55.5 0.277 1.4 857.8 8.039 28.5716 3.98 173.9 54 27.0 11.0190 55.8 0.268 1.2 856.2 8.029 28.5745 3.90 170.6 54 28.0 10.8418 55.8 0.263 1.0 855.1 8.013 28.5543 3.66 159.8 56 29.0 10.6691 55.9 0.254 0.9 854.2 7.993 28.5361 3.35 146.6 55 30.0 10.6454 54.0 0.280 0.7 852.3 7.972 28.5469 3.22 140.6 54 31.0 10.5945 50.9 0.285 0.6 851.6 7.949 28.5514 3.11 135.7 51 32.0 10.5552 51.4 0.238 0.5 850.3 7.928 28.5705 3.22 140.8 49 33.0 10.5390 53.2 0.251 0.4 850.2 7.910 28.5804 3.21 140.3 48 34.0 10.5401 53.2 0.230 0.4 848.8 7.894 28.5836 3.23 141.3 49 35.0 10.5359 54.1 0.239 0.3 848.3 7.879 28.5846 3.22 140.8 49 36.0 10.5244 54.5 0.230 0.2 846.5 7.864 28.5850 3.17 138.6 50 37.0 10.4832 54.2 0.248 0.2 846.3 7.851 28.5950 3.01 131.6 61 38.0 10.4321 54.2 0.257 0.2 844.5 7.836 28.6078 2.83 123.7 78 39.0 10.4313 53.6 0.306 0.1 843.5 7.811 28.6213 2.82 123.4 89 40.0 10.4147 52.3 0.306 0.1 842.3 7.781 28.6267 2.76 120.4 98 41.0 10.3780 50.0 0.301 0.1 840.8 7.765 28.6315 2.63 114.9 104 41.8 10.3602 48.5 0.291 0.1 840.4 7.753 28.6357 2.55 111.6 60