*2016/10/18 09:21:10.60 *IOS HEADER VERSION 2.0 2016/04/28 2016/06/13 IVF16 *FILE START TIME : UTC 2016/06/28 21:19:50.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 10 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : A483FF68 NUMBER OF CHANNELS : 25 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Bottle_Number n/a 1 10 2 Bottle:Firing_Sequence n/a 1 10 3 Pressure decibar 1.283 176.297 4 Temperature:Secondary 'deg C (ITS90)' 9.3526 18.4638 5 Transmissivity %/metre 27 58.8 6 Fluorescence:URU:Seapoint mg/m^3 0.91E-01 3.323 7 PAR uE/m^2/sec 0 1941.241 8 PAR:Reference uE/m^2/sec 2327.219 2425.36 9 Salinity:T1:C1 PSS-78 25.3471 30.8844 10 Oxygen:Dissolved:SBE mL/L 2.285 7.222 11 Oxygen:Dissolved:SBE umol/kg 99.6 316.4 12 Number_of_bin_records n/a 241 241 13 Sample_Number n/a 160 169 14 Temperature:Draw 'deg C (ITS90)' 9.5 18.7 15 Salinity:Bottle PSS-78 30.1056 30.1056 16 Flag:Salinity:Bottle ' ' 17 Oxygen:Dissolved mL/L 2.288 7.064 18 Oxygen:Dissolved umol/kg 99.77292 309.4834 19 Flag:Oxygen:Dissolved ' ' 20 Nitrate_plus_Nitrite umol/L 29.3 29.3 21 Flag:Nitrate_plus_Nitrite ' ' 22 Silicate umol/L 67.73 67.73 23 Flag:Silicate ' ' 24 Phosphate umol/L 2.854 2.854 25 Flag:Phosphate ' ' $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 3 I I 0 2 -99 ' ' 3 I I 0 3 -99 ' ' 7 F ' ' 1 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 6 F ' ' 1 6 -99 ' ' 8 F ' ' 3 7 -99 ' ' 7 F ' ' 1 8 -99 ' ' 7 F ' ' 1 9 -99 ' ' 9 F ' ' 4 10 -99 ' ' 7 F ' ' 2 11 -99 ' ' 6 F ' ' 1 12 ' ' ' ' 5 I I 0 13 -99 ' ' 5 I I 0 14 -99 ' ' 6 F R4 1 15 -99 ' ' 9 F R4 4 16 0 ' ' 3 NQ C ' ' 17 -99 ' ' 8 F R4 3 18 -99 ' ' 6 F ' ' 1 19 0 ' ' 3 NQ C ' ' 20 -99 ' ' 7 F R4 2 21 0 ' ' 3 NQ C ' ' 22 -99 ' ' 7 F R4 2 23 0 ' ' 3 NQ C ' ' 24 -99 ' ' 8 F R4 3 25 0 ' ' 3 NQ C ' ' $END $REMARKS Flag channels were initialized with zeros. Non-zero values have the following significance: ---------------------------------------------------------------------------------- 1 = Sample for this measurement was collected but not analyzed. Sample lost. 2 = Acceptable Measurement 3 = Questionable Measurement (Probably Good) 4 = Poor Measurement (Probably Bad) 5 = Measurement Not Reported (Bad) 6 = Mean of replicate measurements 7 = Manual chromatographic peak measurement 8 = Irregular digital chromatographic peak integration 9 = Sample was planned for this measurement from this bottle but was not collected ---------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2016-46 AGENCY : 'WVL, Marine Environment and Habitat Science,' CONTINUED : ' Vancouver, B.C.' COUNTRY : Canada PROJECT : Baynes Sound Ecosystem Study SCIENTIST : Sutherland T. PLATFORM : Vector *LOCATION GEOGRAPHIC AREA : Baynes Sound STATION : BS38 EVENT NUMBER : 104 LATITUDE : 49 34.19000 N ! (deg min) LONGITUDE : 124 34.80000 W ! (deg min) WATER DEPTH : 178 ALTIMETER (M) : 2.08 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0550 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------------- -------------- ---------- Temperature ' ' 4484 Conductivity ' ' 1766 'Pressure:Digiquartz with TC' ' ' 0550 Temperature:2 ' ' 4054 Conductivity:2 ' ' 3531 'Oxygen:SBE 43' ' ' 1119 Fluorometer:Seapoint ' ' 3865 'Transmissometer:WET Labs C-Star' ' ' 1396DR Altimeter ' ' 1252 pH ' ' 0692 PAR/Irradiance:Biospherical/Licor ' ' '4565 QSP200L4S' Unavailable ' ' ' ' $END $REMARKS SOFTWARE VERSION SEASAVE V 7.23.1 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.5 2016/10/06 14:09:31 2410 2410 CLEAN 5.2.1 2016/10/06 14:09:53 2410 2410 ADDSAMP 3.6 2016/10/06 14:25:36 2410 2410 BINAVE 4.2 2016/10/06 14:53:20 2410 10 MERGE 3.5 2016/10/12 16:48:20 10 10 CLEAN 5.2.1 2016/10/12 17:27:58 10 10 MERGEHDR 1.3 2016/10/12 17:28:44 10 10 CALIB 11.9 2016/10/18 09:15:04 10 10 SORT 3.6 2016/10/18 09:16:11 10 10 REMOVECH 8.2 2016/10/18 09:16:34 10 10 CHGUNITS 3.1.1 2016/10/18 09:17:26 10 10 CHGUNITS 3.1.1 2016/10/18 09:17:51 10 10 REORDER 1.3.1 2016/10/18 09:18:18 ? ? HDREDIT2 3.0.2 2016/10/18 09:21:10 ? ? $END $REMARKS -CLEAN functions: 2016/10/06 14:09:37 20 Reset #RECS, MIN & MAX values in header. Interpolation by Channel 1: Scan_Number [n/a] in Pressure Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: P:\Cruise_Data_Processing\2016-46\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2016/10/12 16:48:20 Merge Channel: Bottle_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Phaeo-Pigment:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Temperature:Draw, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Ammonium, Flag:Ammonium, pH, Flag:pH, Dimethyl_Sulphide, Flag:Dimethyl_Sulphide Primary file : P:\Cruise_Data_Processing\2016-46\Processing\hydro\2016-46-0104.samavg Secondary file: P:\Cruise_Data_Processing\2016-46\Processing\hydro\2016-46-0104.mrgcln1s Comments from secondary file: P:\Cruise_Data_Processing\2016-46\Processing\hydro\2016-46-0104.mrgcln1s ------------------------------------------------------------------------ -SORT parameters: 2016/10/06 15:40:24 Sorted in ascending order of channel Bottle_Number -CLEAN functions: 2016/10/12 17:27:56 20 Reset #RECS, MIN & MAX values in header. Change character data from " " to "0" in channels Flag:* Set event to last 4 characters of file name -CALIB parameters: 2016/10/18 09:15:04 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2016-46\Processing\doc\2016-46-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 20 Oxygen:Dissolved:SBE mL/L 10 0.0000000E+00 0.1016800E+01 -SORT parameters: 2016/10/18 09:16:11 Sorted in ascending order of channel Pressure* -REMOVECH 2016/10/18 09:16:34 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Altimeter [metres] Descent_Rate [m/s] Status:Pump Salinity:T0:C0 [PSS-78] Flag -CHANGE units: Temperature reference channel: Temperature:Secondary Salinity reference channel: Salinity:T1:C1 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg -CHANGE units: Temperature reference channel: Temperature:Draw Salinity reference channel: Salinity:T1:C1 'Oxygen:Dissolved' changed from mL/L to umol/kg -HEADER EDITS: 2016/10/18 09:21:10 Applied edit header: P:\Cruise_Data_Processing\2016-46\Processing\doc\HYDRO\2016-46-bot-hdr.txt Channel 2: Bottle:Firing_Sequence [n/a] Name: Bottle_Number ==> Bottle:Firing_Sequence Channel 1: Bottle_Number [n/a] Name: Bottle:Position ==> Bottle_Number Channel 3: Pressure [decibar] Format: F9.4 ==> F7.1 Channel 7: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 10: Oxygen:Dissolved:SBE [mL/L] Format: F11.3 ==> F7.2 Channel 14: Temperature:Draw [deg C (ITS90)] Units: ==> deg C (ITS90) Format: F7.2 ==> F6.1 Channel 15: Salinity:Bottle [PSS-78] Units: ==> PSS-78 Channel 17: Oxygen:Dissolved [mL/L] Units: ==> mL/L Channel 20: Nitrate_plus_Nitrite [umol/L] Units: ==> umol/L Format: F6.2 ==> F7.2 Channel 22: Silicate [umol/L] Units: ==> umol/L Channel 24: Phosphate [umol/L] Units: ==> umol/L Channel 8: PAR:Reference [uE/m^2/sec] Format: F11.3 ==> F7.1 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\CTD Data\2016-47\2016-47-0104.hex Software Version Seasave V 7.23.1 Temperature SN = 4484 Conductivity SN = 1766 Number of Bytes Per Scan = 40 Number of Voltage Words = 5 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jun 28 2016 14:21:36 NMEA Latitude = 49 34.19 N NMEA Longitude = 124 34.80 W NMEA UTC (Time) = Jun 28 2016 21:19:50 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 surface PAR voltage added to scan A/D offset = 5 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds advance voltage 6 0.000 seconds advance voltage 7 0.000 seconds S> Vector: 2016-47 Station: BS38 Depth: System UTC = Jun 28 2016 21:21:36 # nquan = 21 # nvalues = 2410 # units = specified # name 0 = scan: Scan Count # name 1 = bpos: Bottle Position in Carousel # name 2 = nbf: Bottles Fired # name 3 = prDM: Pressure, Digiquartz [db] # name 4 = t090C: Temperature [ITS-90, deg C] # name 5 = t190C: Temperature, 2 [ITS-90, deg C] # name 6 = c0S/m: Conductivity [S/m] # name 7 = c1S/m: Conductivity, 2 [S/m] # name 8 = CStarTr0: Beam Transmission, WET Labs C-Star [%] # name 9 = flSP: Fluorescence, Seapoint # name 10 = sbeox0V: Oxygen raw, SBE 43 [V] # name 11 = par: PAR/Irradiance, Biospherical/Licor # name 12 = spar: SPAR/Surface Irradiance # name 13 = ph: pH # name 14 = altM: Altimeter [m] # name 15 = dz/dtM: Descent Rate [m/s] # name 16 = pumps: Pump Status # name 17 = sal00: Salinity, Practical [PSU] # name 18 = sal11: Salinity, Practical, 2 [PSU] # name 19 = sbeox0ML/L: Oxygen, SBE 43 [ml/l] # name 20 = flag: 0.000e+00 # interval = seconds: 0.0416667 # start_time = Jun 28 2016 21:19:50 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 4484 # 18-Dec-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.39931830e-003 # 6.40333195e-004 # 2.14332102e-005 # 1.81777421e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1766 # 20-Aug-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.12823288e+000 # 4.88293788e-001 # -6.13168477e-004 # 5.30399930e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0550 # 17-Dec-14 # -4.232943e+004 # 1.065076e-001 # 1.464900e-002 # 3.694200e-002 # 0.000000e+000 # 3.041883e+001 # -3.536199e-004 # 4.388420e-006 # 2.583800e-009 # 1.00002764 # 0.67335 # 0.000000e+000 # 1.286170e-002 # -9.445820e+000 # # # # # # 4054 # 20-Aug-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.38634996e-003 # 6.44413405e-004 # 2.32318430e-005 # 2.13707967e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3531 # 06-Feb-13 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.02073624e+001 # 1.56180514e+000 # -2.18950789e-003 # 2.53511714e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 1119 # 19-Dec-15 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.6004e-001 # -0.5129 # -3.1802e-003 # 1.7259e-004 # -3.0507e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.8700 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 3865 # # # 2 # 0.000 # # # # # # 1396DR # Feb 2nd 2016 # 19.3228 # -0.0193 # 0.250 # # # # # # # # # 1252 # # 15.000 # 0.000 # # # # # # # # # 0692 # 12-Jan-16 # 4.6015 # 2.5353 # # # # # # 4565 QSP200L4S # 16-Mar-2011 # 1.00000000 # 0.00000000 # 4115226337.44999980 # 1.00000000 # -0.36780000 # # # # # # # # # 20518 # 21-MAR-2016 # 1627.06600000 # 1.00000000 # # # # datcnv_date = Oct 06 2016 14:09:12, 7.23.2 # datcnv_in = P:\Cruise_Data_Processing\2016-46\RAW\CTD\2016-46-0104.hex P:\Crui se_Data_Processing\2016-46\Processing\doc\2016-46-ctd.XMLCON # datcnv_ox_hysteresis_correction = no # datcnv_ox_tau_correction = yes # datcnv_bottle_scan_range_source = BL file # datcnv_scans_per_bottle = 241 END* Analysis methods: ----------------- Oxygen samples were analyzed at sea using an automated Winkler titration system (Metrohm Dosimat model 876 and a UV light source and detector with a 365nm filter controlled by LV02_876 software designed and constructed by Scripps Institution of Oceanography) with modifications based on Carpenter (1965) and adhering to WOCE protocols (Culberson 1991). For details including a duplicate analysis, see document QF2016-46OXY*.xls. Salinity samples were collected in 200 mL type ll glass bottles with disposable nylon inserts and screw caps supplied by Ocean Scientific International Limited. They were analyzed in a temperature-controlled lab at IOS on a Guildline 8400B Salinometer (S/N 68572) standardized with IAPSO standard seawater 13 to 18 days after collection. There were no duplicates taken, so there is no precision analysis. For details see document QF2017-46SAL*.xls. Nutrient samples were collected in plastic tubes and quick frozen in aluminum blocks stored in -20 freezer. All analysis was performed on frozen samples. They were analyzed using an Astoria analyzer following methods described in IOS Nutrient Methods (1996) Barwell-Clarke and Whitney. For details including a duplicate analysis, see document QF2016-46nuts*.xls. References: 1. Barwell-Clarke, J. and Whitney, F. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. 2. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 3. Culberson, C.H. 1991. Dissolved oxygen. WOCE Hydrographic Programme Operations and Methods (July 1991). 15pp. * For PDF versions of these papers see folder \\Cruise_Data\DOCUMENTS\Analysis Reference Papers --------------------------------------------------------------------------------- CTD Data Processing Notes: -------------------------- Transmissivity, Fluorescence and PAR, PAR:Reference data are nominal and unedited except that some records were removed in editing temperature and salinity. Channel pH:SBE was removed from casts 95-104 due to sensor malfunction. For details on how the transmissivity calibration parameters were calculated see the document in folder "\cruise_data\documents\transmissivity". Dissolved oxygen was calibrated using the method described in SeaBird Application Note #64-2, June 2012 revision, except that a small offset in the fit was allowed. NOTE: While the CTD fluorescence data are expressed in concentration units, they do not always compare well to extracted chlorophyll samples, particularly for casts far from shore. It is recommended that users check extracted chlorophyll values where available. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see the report: 2016-46_Processing_Report.doc. --------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0 1.0168) $END !1- 2- --3--- ---4---- --5-- ---6--- --7--- --8--- ---9---- --10-- --11- -12- -13- --14- ---15--- 16 ---17-- --18- 19 --20-- 21 --22-- 23 ---24-- 25 !Bo Bo Pressu Temperat Trans Fluores PAR PAR: Salinity Oxygen Oxyge Numb Samp Tempe Salinity Fl Oxygen: Oxyge Fl Nitrat Fl Silica Fl Phospha Fl !tt tt re ure: missi cence: Refere :T1:C1 : n: er_o le_ ratur :Bottle ag Dissolv n: ag e_ ag te ag te ag !~u ~u Secondar vity URU: nce Dissol Disso ~bin Numb e: ~o ed Disso ~o plus_ ~t ~i ~p !mb en y Seapoin ved: lved: _rec er Draw tt lved lv Nitrit ri ca ha !er ce t SBE SBE ords le ed e te te te !-- -- ------ -------- ----- ------- ------ ------ -------- ------ ----- ---- ---- ----- -------- -- ------- ----- -- ------ -- ------ -- ------- -- *END OF HEADER 10 10 1.3 18.4638 38.9 0.639 1941.2 2408.2 25.3471 6.56 287.7 241 169 18.7 -99.0000 0 6.500 285.1 0 29.30 0 67.73 0 2.854 0 9 9 5.1 18.0732 38.2 1.179 665.5 2408.3 25.3816 6.60 289.3 241 168 17.9 -99.0000 0 6.824 299.3 6 -99.00 0 -99.00 0 -99.000 0 8 8 9.9 16.3026 27.0 3.323 185.2 2425.3 26.1832 7.22 316.4 241 167 16.0 -99.0000 0 7.064 309.5 0 -99.00 0 -99.00 0 -99.000 0 7 7 24.8 11.4971 52.5 1.007 5.9 2425.4 28.6462 4.64 202.7 241 166 11.5 -99.0000 0 4.590 200.5 0 -99.00 0 -99.00 0 -99.000 0 6 6 49.7 10.3754 55.0 0.158 0.1 2402.5 29.2862 4.06 177.4 241 165 10.5 -99.0000 0 4.026 175.8 0 -99.00 0 -99.00 0 -99.000 0 5 5 74.9 9.3544 58.8 0.110 0.0 2399.2 29.7474 4.01 175.0 241 164 9.5 -99.0000 0 3.983 173.8 0 -99.00 0 -99.00 0 -99.000 0 4 4 100.0 9.3526 57.8 0.101 0.0 2327.2 30.0845 3.94 172.1 241 163 9.5 30.1056 0 3.929 171.4 0 -99.00 0 -99.00 0 -99.000 0 3 3 171.6 9.7772 48.0 0.091 0.0 2362.6 30.8800 2.29 100.0 241 162 9.9 -99.0000 0 2.288 99.8 0 -99.00 0 -99.00 0 -99.000 0 2 2 173.8 9.7786 47.5 0.094 0.0 2349.7 30.8819 2.29 99.8 241 161 9.9 -99.0000 0 2.319 101.1 0 -99.00 0 -99.00 0 -99.000 0 1 1 176.3 9.7804 46.5 0.094 0.0 2373.9 30.8844 2.29 99.6 241 160 10.0 -99.0000 0 2.424 105.7 0 -99.00 0 -99.00 0 -99.000 0