*2016/07/27 15:26:40.51 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2016/04/29 15:30:02.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 41 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 23D6EC77 NUMBER OF CHANNELS : 11 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 3.256 42.918 2 Temperature:Primary 'deg C (ITS90)' 9.2836 11.5696 3 Transmissivity %/metre 26.5 55.1 4 Fluorescence:URU:Seapoint mg/m^3 0.359 8.385 5 PAR uE/m^2/sec 0.77E-01 362.901 6 PAR:Reference uE/m^2/sec 1126.4 1160.2 7 pH:SBE:Nominal n/a 7.796 8.311 8 Salinity:T0:C0 PSS-78 27.1945 28.4672 9 Oxygen:Dissolved:SBE mL/L 4.442 7.789 10 Oxygen:Dissolved:SBE umol/kg 194.0412 340.7012 11 Number_of_bin_records n/a 30 53 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 6 F ' ' 1 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 7 F ' ' 1 6 -99 ' ' 7 F ' ' 1 7 -99 ' ' 8 F ' ' 3 8 -99 ' ' 9 F ' ' 4 9 -99 ' ' 7 F ' ' 2 10 -99 ' ' 6 F ' ' 1 11 -99 ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2016-45\Pro $END *ADMINISTRATION MISSION : 2016-45 AGENCY : 'WVL, Marine Environment and Habitat Science,' CONTINUED : ' Vancouver, B.C.' COUNTRY : Canada PROJECT : Coastal Ecosystem Research Program SCIENTIST : Sutherland T. PLATFORM : Vector *LOCATION GEOGRAPHIC AREA : Strait of Georgia STATION : 13 EVENT NUMBER : 29 LATITUDE : 49 31.33000 N ! (deg min) LONGITUDE : 124 48.47000 W ! (deg min) WATER DEPTH : 47 ALTIMETER (M) : 6.81 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0550 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------------- -------------- ---------- Temperature ' ' 4484 Conductivity ' ' 1766 'Pressure:Digiquartz with TC' ' ' 0550 Temperature:2 ' ' 4054 Conductivity:2 ' ' 3531 'Oxygen:SBE 43' ' ' 1119 Fluorometer:Seapoint ' ' 3865 'Transmissometer:WET Labs C-Star' ' ' 1396DR Altimeter ' ' 1253 pH ' ' 0692 PAR/Irradiance:Biospherical/Licor ' ' '4565 QSP200L4S' Unavailable ' ' ' ' $END $REMARKS SOFTWARE VERSION SEASAVE V 7.23.1 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.5 2016/07/05 11:13:22 4561 4561 CLEAN 5.2.1 2016/07/05 11:15:35 4561 4561 SHIFTDAT 3.4 2016/07/05 11:37:26 4561 4561 SHIFTDAT 3.4 2016/07/15 14:32:38 4561 4561 SHIFTDAT 3.4 2016/07/15 15:01:31 4561 4561 DELETE 6.3 2016/07/15 15:05:32 4561 1868 CTDEDIT 5.0.4 2016/07/26 13:35:54 1868 1795 CALIB 11.8.1 2016/07/27 12:14:29 1795 1795 FILTERS 4.3 2016/07/27 14:23:31 1795 1795 BINAVE 4.2 2016/07/27 14:25:24 1795 41 REMOVECH 8.2 2016/07/27 15:00:19 41 41 CHGUNITS 3.1 2016/07/27 15:00:36 41 41 REORDER 1.3.1 2016/07/27 15:00:52 ? ? HDREDIT2 3.0.2 2016/07/27 15:26:40 ? ? $END $REMARKS -CLEAN functions: 2016/07/05 11:15:11 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.40 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 33.38 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2016/07/26 13:35:54 73 records were deleted in this editing session. 52 changes in channel Salinity:T0:C0 -CALIB parameters: 2016/07/27 12:14:29 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2016-45\Processing\doc\2016-45-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 18 Oxygen:Dissolved:SBE mL/L 10 0.0000000E+00 0.1015000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2016/07/27 15:00:19 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Altimeter [metres] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: Temperature reference channel: Temp* Salinity reference channel: Sal* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2016/07/27 15:26:40 Applied edit header: P:\Cruise_Data_Processing\2016-45\Processing\doc\2016-45-hdr.txt Channel 1: Pressure [decibar] Format: F11.2 ==> F7.1 Channel 5: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 9: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 6: PAR:Reference [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 7: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a Channel 11: Number_of_bin_records [n/a] Pad: ' ' ==> -99 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\CTD Data\2016-45\2016-45-0029.hex Software Version Seasave V 7.23.1 Temperature SN = 4484 Conductivity SN = 1766 Number of Bytes Per Scan = 40 Number of Voltage Words = 5 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Apr 29 2016 08:31:10 NMEA Latitude = 49 31.33 N NMEA Longitude = 124 48.47 W NMEA UTC (Time) = Apr 29 2016 15:30:02 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 surface PAR voltage added to scan A/D offset = 5 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds advance voltage 6 0.000 seconds advance voltage 7 0.000 seconds S> Vector: 2016-45 Station: 13 Depth: 47 System UTC = Apr 29 2016 15:31:10 # nquan = 19 # nvalues = 4561 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = CStarTr0: Beam Transmission, WET Labs C-Star [%] # name 7 = flSP: Fluorescence, Seapoint # name 8 = sbeox0V: Oxygen raw, SBE 43 [V] # name 9 = par: PAR/Irradiance, Biospherical/Licor # name 10 = spar: SPAR/Surface Irradiance # name 11 = ph: pH # name 12 = altM: Altimeter [m] # name 13 = dz/dtM: Descent Rate [m/s] # name 14 = pumps: Pump Status # name 15 = sal00: Salinity, Practical [PSU] # name 16 = sal11: Salinity, Practical, 2 [PSU] # name 17 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 1 # name 18 = flag: flag # span 0 = 1, 4561 # span 1 = 2.187, 43.383 # span 2 = 9.2644, 11.6400 # span 3 = 9.2622, 11.6309 # span 4 = 3.105933, 3.162244 # span 5 = 3.105837, 3.162237 # span 6 = 71.2085, 86.2609 # span 7 = 2.6862e-01, 1.0085e+01 # span 8 = 1.9536, 3.1013 # span 9 = 6.9516e-02, 5.7892e+02 # span 10 = 1.1264e+03, 1.1880e+03 # span 11 = 7.732, 8.314 # span 12 = 1.98, 100.00 # span 13 = -0.628, 0.595 # span 14 = 0, 1 # span 15 = 27.1411, 28.4826 # span 16 = 27.0953, 28.4757 # span 17 = 4.3197, 7.7007 # span 18 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Apr 29 2016 15:30:02 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 4484 # 18-Dec-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.39931830e-003 # 6.40333195e-004 # 2.14332102e-005 # 1.81777421e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1766 # 20-Aug-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.12823288e+000 # 4.88293788e-001 # -6.13168477e-004 # 5.30399930e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0550 # 17-Dec-14 # -4.232943e+004 # 1.065076e-001 # 1.464900e-002 # 3.694200e-002 # 0.000000e+000 # 3.041883e+001 # -3.536199e-004 # 4.388420e-006 # 2.583800e-009 # 1.00002764 # 0.67335 # 0.000000e+000 # 1.286170e-002 # -9.445820e+000 # # # # # # 4054 # 20-Aug-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.38634996e-003 # 6.44413405e-004 # 2.32318430e-005 # 2.13707967e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3531 # 06-Feb-13 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.02073624e+001 # 1.56180514e+000 # -2.18950789e-003 # 2.53511714e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 1119 # 19-Dec-15 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.6004e-001 # -0.5129 # -3.1802e-003 # 1.7259e-004 # -3.0507e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.8700 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 3865 # # # 2 # 0.000 # # # # # # 1396DR # Feb 2nd 2016 # 19.3228 # -0.0193 # 0.250 # # # # # # # # # 1253 # # 15.000 # 0.000 # # # # # # # # # 0692 # 12-Jan-16 # 4.6015 # 2.5353 # # # # # # 4565 QSP200L4S # 16-Mar-2011 # 1.00000000 # 0.00000000 # 4115226337.44999980 # 1.00000000 # -0.36780000 # # # # # # # # # 20518 # 21-MAR-2016 # 1627.06600000 # 1.00000000 # # # # datcnv_date = Jul 04 2016 16:29:02, 7.23.2 [datcnv_vars = 15] # datcnv_in = P:\Cruise_Data_Processing\2016-45\RAW\CTD\2016-45-0029.hex P:\Crui se_Data_Processing\2016-45\Processing\doc\2016-45-ctd.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Jul 05 2016 09:51:00, 7.23.2 # wildedit_in = P:\Cruise_Data_Processing\2016-45\Processing\convert\2016-45-002 9.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Jul 05 2016 10:45:22, 7.23.2 # alignctd_in = P:\Cruise_Data_Processing\2016-45\Processing\wildedit\2016-45-00 29.cnv # alignctd_adv = sbeox0V 2.000 # celltm_date = Jul 05 2016 10:51:28, 7.23.2 # celltm_in = P:\Cruise_Data_Processing\2016-45\Processing\align\2016-45-0029.cn v # celltm_alpha = 0.0245, 0.0245 # celltm_tau = 9.5000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Jul 05 2016 10:58:55, 7.23.2 [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2016-45\Processing\celltm\2016-45-0029.c nv P:\Cruise_Data_Processing\2016-45\Processing\doc\2016-45-ctd.XMLCON # derive_time_window_docdt = seconds: 1 # derive_ox_tau_correction = yes # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some records near the top and bottom of the cast; salinity was cleaned lightly. ---------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Transmissivity, Fluorescence, pH, PAR and PAR:Reference data are nominal and unedited except that some records were removed in editing temperature and salinity. NOTE: While the CTD fluorescence data are expressed in concentration units, they do not always compare well to extracted chlorophyll samples, particularly for casts far from shore. No extracted chlorophyll values where available. For details on how the transmissivity calibration parameters were calculated see the document in folder "\cruise_data\documents\transmissivity". Dissolved oxygen was calibrated using the method described in SeaBird Application Note #64-2, June 2012 revision. The results were unusual with a smaller correction than usual, which is likely due to incomplete flushing of Niskin bottles and low dissolved oxygen gradients at mid-depths. See the processing report for details. The Oxygen:Dissolved:SBE data are considered, very roughly, to be: ±0.7 mL/L from 0 to 20db ±0.3 mL/L from 20db to 200db ±0.1 mL/L below 200db The pH:SBE channel was removed from casts #2 to 7, 14, 17 to 21 and 90 as the downcast data were clearly bad. For most of those casts, it is possible that the sensor was not hydrated between casts. For casts #14 it is known that the cap had been left on during the cast and for cast #90 it appears that the cap was left on. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see the report: 2016-05-proc.doc. ---------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0 1.015) $END !--1--- ---2---- --3-- ---4--- --5--- --6--- ---7--- ---8---- --9--- --10- -11- !Pressu Temperat Trans Fluores PAR PAR: pH:SBE: Salinity Oxygen Oxyge Numb !re ure: missi cence: Refere Nominal :T0:C0 : n: er_o ! Primary vity URU: nce Dissol Disso ~bin ! Seapoin ved: lved: _rec ! t SBE SBE ords !------ -------- ----- ------- ------ ------ ------- -------- ------ ----- ---- *END OF HEADER 3.3 11.5696 28.3 6.891 362.9 1160.2 8.293 27.1945 7.79 340.7 30 4.0 11.3901 26.5 8.385 277.0 1159.3 8.309 27.3664 7.49 327.7 53 5.0 11.1733 28.7 7.012 187.8 1157.6 8.310 27.5415 7.18 314.1 44 6.0 11.0490 31.1 6.497 124.0 1155.8 8.311 27.6010 7.10 310.5 44 7.0 10.8580 32.3 6.596 84.2 1154.2 8.307 27.6776 7.00 306.1 42 8.0 10.5898 34.6 5.662 59.9 1152.6 8.296 27.7877 6.72 293.9 44 9.0 10.4455 38.6 5.192 43.3 1151.9 8.286 27.8315 6.62 289.5 43 10.0 10.2992 40.1 4.140 31.7 1150.3 8.271 27.8802 6.49 283.5 44 11.0 10.2173 43.0 3.537 23.9 1148.9 8.253 27.9924 6.23 272.4 43 12.0 10.1260 45.0 3.061 18.3 1148.2 8.231 28.0576 6.10 266.8 44 13.0 10.0239 46.4 2.476 14.4 1146.3 8.194 28.1127 5.96 260.5 44 14.0 9.9564 48.4 2.234 11.4 1144.7 8.168 28.1482 5.88 256.8 45 15.0 9.9291 49.3 2.265 9.2 1143.1 8.148 28.1637 5.84 255.3 45 16.0 9.9004 49.9 1.713 7.5 1142.3 8.121 28.1782 5.79 252.8 44 17.0 9.8415 50.7 1.354 6.1 1141.0 8.093 28.1801 5.70 248.9 46 18.0 9.7791 52.5 1.284 5.1 1140.3 8.066 28.1850 5.65 246.8 45 19.0 9.7839 52.6 1.285 4.2 1139.0 8.034 28.2373 5.59 244.5 46 20.0 9.7502 52.2 1.357 3.5 1138.4 8.013 28.2481 5.54 242.2 41 21.0 9.7444 52.8 1.242 2.9 1138.4 7.992 28.2496 5.54 242.0 41 22.0 9.7419 52.7 1.419 2.5 1137.2 7.978 28.2506 5.53 241.8 40 23.0 9.7292 52.5 1.199 2.1 1136.4 7.969 28.2558 5.49 239.8 42 24.0 9.6799 52.7 0.981 1.7 1136.4 7.961 28.2866 5.40 236.1 44 25.0 9.6447 53.4 0.888 1.5 1135.9 7.954 28.3046 5.32 232.3 42 26.0 9.5931 53.4 0.931 1.2 1134.4 7.949 28.3222 5.24 228.9 41 27.0 9.5649 53.7 0.960 1.0 1133.6 7.940 28.3434 5.19 226.8 42 28.0 9.5131 53.7 0.783 0.9 1132.4 7.933 28.3642 5.09 222.5 42 29.0 9.4590 55.1 0.561 0.7 1131.5 7.923 28.3858 5.00 218.5 44 30.0 9.4452 55.1 0.464 0.6 1130.4 7.912 28.3979 4.96 216.8 43 31.0 9.4386 55.0 0.503 0.5 1128.9 7.899 28.4004 4.95 216.2 44 32.0 9.4333 55.0 0.408 0.5 1128.4 7.885 28.4045 4.93 215.3 42 33.0 9.4247 55.0 0.427 0.4 1128.0 7.870 28.4180 4.90 214.0 43 34.0 9.4195 54.6 0.501 0.3 1126.6 7.860 28.4211 4.88 213.2 40 35.0 9.4166 53.5 0.430 0.3 1126.4 7.850 28.4249 4.87 212.7 42 36.0 9.4086 54.2 0.450 0.2 1126.4 7.839 28.4278 4.85 211.7 42 37.0 9.3971 54.6 0.431 0.2 1126.6 7.832 28.4296 4.82 210.4 43 38.0 9.3870 54.5 0.373 0.2 1128.0 7.826 28.4325 4.79 209.5 43 39.0 9.3751 51.6 0.422 0.1 1128.2 7.822 28.4354 4.72 206.1 42 40.0 9.3444 53.3 0.389 0.1 1128.2 7.817 28.4448 4.60 200.9 43 41.0 9.3252 51.5 0.375 0.1 1128.4 7.812 28.4574 4.55 198.9 43 42.0 9.3189 51.5 0.376 0.1 1128.4 7.806 28.4605 4.53 197.7 48 42.9 9.2836 51.1 0.359 0.1 1128.4 7.796 28.4672 4.44 194.0 50