*2016/08/15 09:00:49.54 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2016/05/17 07:30:42.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 15 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : 348E906 NUMBER OF CHANNELS : 24 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Bottle_Number n/a 1 15 2 Bottle:Firing_Sequence n/a 1 15 3 Pressure decibar 2.158 375.088 4 Temperature:Secondary 'deg C (ITS90)' 8.1199 10.4332 5 Transmissivity %/metre 12.6 59.8 6 Fluorescence:URU:Seapoint mg/m^3 0.8E-01 11.881 7 pH:SBE:Nominal n/a 7.784 8.324 8 Salinity:T1:C1 PSS-78 26.285 32.6409 9 Oxygen:Dissolved:SBE mL/L 4.368 8.8 10 Oxygen:Dissolved:SBE umol/kg 190.2 385.1 11 Number_of_bin_records n/a 55 241 12 Sample_Number n/a 17 31 13 Temperature:Draw 'deg C (ITS90)' 8.1 10.2 14 Salinity:Bottle PSS-78 27.5578 27.5578 15 Flag:Salinity:Bottle ' ' 16 Oxygen:Dissolved mL/L 4.338 7.633 17 Oxygen:Dissolved umol/kg 188.8936 333.9553 18 Flag:Oxygen:Dissolved ' ' 19 Nitrate_plus_Nitrite umol/L 5.14 20.76 20 Flag:Nitrate_plus_Nitrite ' ' 21 Silicate umol/L 10.53 36.3 22 Flag:Silicate ' ' 23 Phosphate umol/L 0.551 1.683 24 Flag:Phosphate ' ' $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 3 I I 0 2 -99 ' ' 3 I I 0 3 -99 ' ' 7 F ' ' 1 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 6 F ' ' 1 6 -99 ' ' 8 F ' ' 3 7 -99 ' ' 8 F ' ' 3 8 -99 ' ' 9 F ' ' 4 9 -99 ' ' 7 F ' ' 2 10 -99 ' ' 6 F ' ' 1 11 ' ' ' ' 5 I I 0 12 -99 ' ' 5 I I 0 13 -99 ' ' 6 F R4 1 14 -99 ' ' 9 F R4 4 15 0 ' ' 3 NQ C ' ' 16 -99 ' ' 8 F R4 3 17 -99 ' ' 6 F ' ' 1 18 0 ' ' 3 NQ C ' ' 19 -99 ' ' 7 F R4 2 20 0 ' ' 3 NQ C ' ' 21 -99 ' ' 7 F R4 2 22 0 ' ' 3 NQ C ' ' 23 -99 ' ' 8 F R4 3 24 0 ' ' 3 NQ C ' ' $END $REMARKS Flag channels were initialized with zeros. Non-zero values have the following significance: ---------------------------------------------------------------------------------- 1 = Sample for this measurement was collected but not analyzed. Sample lost. 2 = Acceptable Measurement 3 = Questionable Measurement (Probably Good) 4 = Poor Measurement (Probably Bad) 5 = Measurement Not Reported (Bad) 6 = Mean of replicate measurements 7 = Manual chromatographic peak measurement 8 = Irregular digital chromatographic peak integration 9 = Sample was planned for this measurement from this bottle but was not collected ---------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2016-41 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : WC - Douglas Channel - Freshwater SCIENTIST : Johannessen S. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : Douglas Channel STATION : KSK1 EVENT NUMBER : 2 LATITUDE : 53 28.56000 N ! (deg min) LONGITUDE : 129 12.60000 W ! (deg min) WATER DEPTH : 384 ALTIMETER (M) : 5.615 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2106 Conductivity ' ' 2280 'Pressure:Digiquartz with TC' ' ' 0443 Temperature:2 ' ' 2663 Conductivity:2 ' ' 2754 'Oxygen:SBE 43' ' ' 0997 Fluorometer:Seapoint ' ' 3640 'Transmissometer:WET Labs C-Star' ' ' 1185DR Altimeter ' ' 62354 pH ' ' 0692 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.23.2 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.5 2016/07/28 15:08:47 3068 3068 CLEAN 5.2.1 2016/07/28 15:24:23 3068 3068 ADDSAMP 3.6 2016/07/28 15:52:10 3068 3068 BINAVE 4.2 2016/07/28 15:52:29 3068 15 MERGE 3.5 2016/07/28 16:42:48 15 15 CALIB 11.8.1 2016/08/12 14:32:55 15 15 CALIB 11.8.1 2016/08/12 14:33:15 15 15 SORT 3.6 2016/08/12 16:53:56 15 15 REMOVECH 8.2 2016/08/15 08:53:00 15 15 CHGUNITS 3.1 2016/08/15 08:57:47 15 15 CHGUNITS 3.1 2016/08/15 08:57:52 15 15 REORDER 1.3.1 2016/08/15 08:58:12 ? ? HDREDIT2 3.0.2 2016/08/15 09:00:49 ? ? $END $REMARKS -CLEAN functions: 2016/07/28 15:24:22 20 Reset #RECS, MIN & MAX values in header. Insert Pad Values in Channel: Fluorescence:URU:Seapoint [mg/m^3] where channel Fluorescence:URU:Seapoint [mg/m^3] is in the range 14.816 to 15 0 data records in pad range. Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: P:\Cruise_Data_Processing\2016-41\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2016/07/28 16:42:48 Merge Channel: Bottle_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Phaeo-Pigment:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Temperature:Draw, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Ammonium, Flag:Ammonium, pH, Flag:pH, Dimethyl_Sulphide, Flag:Dimethyl_Sulphide Primary file : P:\Cruise_Data_Processing\2016-41\Processing\hydro\2016-41-0002.samavg Secondary file: P:\Cruise_Data_Processing\2016-41\Processing\hydro\2016-41-0002.mrgcln1s Comments from secondary file: P:\Cruise_Data_Processing\2016-41\Processing\hydro\2016-41-0002.mrgcln1s ------------------------------------------------------------------------ -SORT parameters: 2016/07/28 16:42:40 Sorted in ascending order of channel Bottle_Number -CALIB parameters: 2016/08/12 14:32:55 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Salinity is computed Calibration file = P:\Cruise_Data_Processing\2016-41\Processing\doc\2016-41-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 5 Temperature:Primary deg C (IT 10 -0.1500000E-02 0.1000000E+01 18 Oxygen:Dissolved:SBE mL/L 10 0.3770000E-01 0.1020800E+01 Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 16 Salinity:T0:C0 PSS-78 130 Pressure Temperature:Primary Conductivity:Primary -CALIB parameters: 2016/08/12 14:33:15 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2016-41\Processing\doc\2016-41-recal2.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 16 Salinity:T0:C0 PSS-78 10 0.4000000E-02 0.1000000E+01 17 Salinity:T1:C1 PSS-78 10 0.2000000E-02 0.1000000E+01 -SORT parameters: 2016/08/12 16:53:56 Sorted in ascending order of channel Pressure* -REMOVECH 2016/08/15 08:53:00 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Altimeter [metres] Descent_Rate [m/s] Status:Pump Salinity:T0:C0 [PSS-78] Flag -CHANGE units: Temperature reference channel: Temperature:Secondary Salinity reference channel: Salin* 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg -CHANGE units: Temperature reference channel: Temperature:Draw Salinity reference channel: Salin* 'Oxygen:Dissolved' changed from mL/L to umol/kg -HEADER EDITS: 2016/08/15 09:00:49 Applied edit header: P:\Cruise_Data_Processing\2016-41\Processing\doc\HYDRO\2016-41-bot-hdr.txt Channel 2: Bottle:Firing_Sequence [n/a] Name: Bottle_Number ==> Bottle:Firing_Sequence Channel 1: Bottle_Number [n/a] Name: Bottle:Position ==> Bottle_Number Channel 3: Pressure [decibar] Format: F9.4 ==> F7.1 Channel 9: Oxygen:Dissolved:SBE [mL/L] Format: F11.3 ==> F7.2 Channel 13: Temperature:Draw [deg C (ITS90)] Units: ==> deg C (ITS90) Format: F7.2 ==> F6.1 Channel 14: Salinity:Bottle [PSS-78] Units: ==> PSS-78 Channel 16: Oxygen:Dissolved [mL/L] Units: ==> mL/L Channel 19: Nitrate_plus_Nitrite [umol/L] Units: ==> umol/L Format: F6.2 ==> F7.2 Channel 21: Silicate [umol/L] Units: ==> umol/L Channel 23: Phosphate [umol/L] Units: ==> umol/L Channel 7: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\CTD Data\2016-41\2016-41-0002.hex Software Version Seasave V 7.23.2 Temperature SN = 2106 Conductivity SN = 2280 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = May 17 2016 07:38:02 NMEA Latitude = 53 28.56 N NMEA Longitude = 129 12.60 W NMEA UTC (Time) = May 17 2016 07:30:42 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Mission: 2016-41 Ship: J.P. Tully Station: KSK1 Depth: 384 System UTC = May 17 2016 07:38:02 # nquan = 19 # nvalues = 3068 # units = specified # name 0 = scan: Scan Count # name 1 = bpos: Bottle Position in Carousel # name 2 = nbf: Bottles Fired # name 3 = prDM: Pressure, Digiquartz [db] # name 4 = t090C: Temperature [ITS-90, deg C] # name 5 = t190C: Temperature, 2 [ITS-90, deg C] # name 6 = c0S/m: Conductivity [S/m] # name 7 = c1S/m: Conductivity, 2 [S/m] # name 8 = CStarTr0: Beam Transmission, WET Labs C-Star [%] # name 9 = flSP: Fluorescence, Seapoint # name 10 = sbeox0V: Oxygen raw, SBE 43 [V] # name 11 = ph: pH # name 12 = altM: Altimeter [m] # name 13 = dz/dtM: Descent Rate [m/s] # name 14 = pumps: Pump Status # name 15 = sal00: Salinity, Practical [PSU] # name 16 = sal11: Salinity, Practical, 2 [PSU] # name 17 = sbeox0ML/L: Oxygen, SBE 43 [ml/l] # name 18 = flag: 0.000e+00 # interval = seconds: 0.0416667 # start_time = May 17 2016 07:30:42 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 17-Dec-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14703785e-003 # 6.31044927e-004 # 2.13121431e-005 # 2.18594910e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2280 # 19-Dec-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.00904009e+001 # 1.35149315e+000 # -1.84720682e-003 # 1.90856808e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0443 # 17-Dec-14 # -4.435292e+004 # -1.635794e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993627e+001 # -3.271008e-004 # 3.759160e-006 # 1.565300e-009 # 0.99991613 # -0.54760 # 0.000000e+000 # 1.282462e-002 # -8.599824e+000 # # # # # # 2663 # 15-Jan-15 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36565531e-003 # 6.42337654e-004 # 2.40578991e-005 # 2.42263656e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2754 # 19-Dec-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.05920237e+001 # 1.61356129e+000 # -1.94911294e-003 # 2.41671700e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0997 # 17-Jan-15 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.0785e-001 # -0.6967 # -3.5082e-003 # 1.2934e-004 # -1.8411e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.6200 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 3640 # # # 1 # 0.000 # # # # # # 1185DR # APR 27. 2016 # 19.3479 # -1.1028 # 0.250 # # # # # # # # # 62354 # # 15.000 # 0.000 # # # # # # # # # 0692 # 12 Jan 2016 # 4.6015 # 2.5353 # # # # # # # datcnv_date = Jul 28 2016 15:05:12, 7.23.2 # datcnv_in = P:\Cruise_Data_Processing\2016-41\RAW\CTD\2016-41-0002.hex P:\Crui se_Data_Processing\2016-41\Processing\doc\2016-41-ctd.xmlcon # datcnv_ox_hysteresis_correction = no # datcnv_ox_tau_correction = yes # datcnv_bottle_scan_range_source = BL file # datcnv_scans_per_bottle = 241 END* Analysis methods: ----------------- Oxygen samples were analyzed at sea using an automated Winkler titration system (Metrohm Dosimat model 876 and a UV light source and detector with a 365 nm filter controlled by LVO2_876 software designed and constructed by Scripps Institution of Oceanography) with modifications based on Carpenter (1965) and adhering to WOCE protocols (Culberson 1991). For details including a duplicate analysis, see document QF2016-41OXY*.xls. Salinity samples were collected in 200 mL type ll glass bottles with disposable nylon inserts and screw caps supplied by Ocean Scientific International Limited. They were analyzed in a temperature-controlled lab at IOS on a Guildline 8400B Salinometer (S/N 68572) standardized with IAPSO standard seawater 51 to 56 days after collection. For details see document QF2016-41SAL*.xlsx. Nutrient samples were collected in plastic tubes and quick frozen in aluminum blocks stored in -20 freezer. All analysis was performed on frozen samples. They were analyzed using an Astoria analyzer following methods described in IOS Nutrient Methods (1996) Barwell-Clarke and Whitney. For details including a precision and accuracy statement, see document NUTS_QF2016-41*.xlsx. References: 1. Barwell-Clarke, J. and Whitney, F. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. 2. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 3. Culberson, C.H. 1991. Dissolved oxygen. WOCE Hydrographic Programme Operations and Methods (July 1991). 15pp. * For PDF versions of these papers see folder \\Cruise_Data\DOCUMENTS\Analysis Reference Papers --------------------------------------------------------------------------------- CTD Data Processing Notes: -------------------------- Transmissivity, Fluorescence and pH data are nominal and unedited except that some records were removed in editing temperature and salinity. For details on how the transmissivity calibration parameters were calculated see the document in folder "\cruise_data\documents\transmissivity". Dissolved oxygen was calibrated using the method described in SeaBird Application Note #64-2, June 2012 revision. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. Channel pH:SBE was removed from events 12, 13 and 14 because it was apparent that the sensor was not well hydrated. For details on the processing see the report: 2016-41_Processing_Report.doc. --------------------------------------------------------------------------------- *CALIBRATION $TABLE: CALCULATED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 130 -99 (Pressure Temperature:Primary Conductivity:Primary) () $END $TABLE: CORRECTED CHANNELS !Name Units Fmla Pad Coefficients !---------------------- --------------- ---- ------ ------------ Temperature:Primary 'deg C (ITS90)' 10 -99 () (-0.15E-02 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (0.377E-01 1.0208) Salinity:T0:C0 PSS-78 10 -99 () (0.4E-02 1) Salinity:T1:C1 PSS-78 10 -99 () (0.2E-02 1) $END !1- 2- --3--- ---4---- --5-- ---6--- ---7--- ---8---- --9--- --10- -11- -12- --13- ---14--- 15 ---16-- --17- 18 --19-- 20 --21-- 22 ---23-- 24 !Bo Bo Pressu Temperat Trans Fluores pH:SBE: Salinity Oxygen Oxyge Numb Samp Tempe Salinity Fl Oxygen: Oxyge Fl Nitrat Fl Silica Fl Phospha Fl !tt tt re ure: missi cence: Nominal :T1:C1 : n: er_o le_ ratur :Bottle ag Dissolv n: ag e_ ag te ag te ag !~u ~u Secondar vity URU: Dissol Disso ~bin Numb e: ~o ed Disso ~o plus_ ~t ~i ~p !mb en y Seapoin ved: lved: _rec er Draw tt lved lv Nitrit ri ca ha !er ce t SBE SBE ords le ed e te te te !-- -- ------ -------- ----- ------- ------- -------- ------ ----- ---- ---- ----- -------- -- ------- ----- -- ------ -- ------ -- ------- -- *END OF HEADER 15 15 2.2 10.4332 12.6 11.881 8.324 26.2850 8.80 385.1 241 31 -99.0 -99.0000 -99.000 -99.0 -99.00 -99.00 -99.000 14 14 2.2 10.3497 12.9 11.738 8.286 26.4962 8.66 378.8 59 30 -99.0 27.5578 -99.000 -99.0 -99.00 -99.00 -99.000 13 13 2.2 10.3013 12.7 11.479 8.289 26.6012 8.63 377.5 55 29 10.2 -99.0000 7.633 334.0 5.14 10.53 0.551 12 12 9.5 8.3793 49.9 1.302 7.843 30.0966 5.57 243.0 241 28 9.0 -99.0000 5.411 236.1 17.80 28.93 1.473 11 11 19.4 8.1238 56.6 0.328 7.811 30.7142 5.36 233.5 241 27 8.8 -99.0000 5.287 230.5 19.00 31.20 1.577 10 10 29.4 8.1528 57.7 0.214 7.814 30.9603 5.35 233.4 241 26 8.9 -99.0000 5.280 230.2 18.90 31.93 1.571 9 9 49.3 8.2332 59.3 0.120 7.839 31.4903 5.45 237.4 241 25 8.9 -99.0000 5.321 231.9 6 18.41 6 31.18 6 1.544 6 8 8 74.5 8.3035 59.6 0.091 7.814 32.0338 4.89 213.1 241 24 9.0 -99.0000 4.853 211.4 19.09 33.32 1.604 7 7 99.0 8.4036 59.8 0.080 7.836 32.1857 4.98 217.0 241 23 9.0 -99.0000 4.885 212.8 18.31 31.42 1.535 6 6 149.4 8.2943 58.9 0.083 7.804 32.4495 4.56 198.6 241 22 8.9 -99.0000 4.512 196.5 19.93 34.87 1.640 5 5 199.4 8.2523 58.2 0.080 7.795 32.5186 4.46 194.4 241 21 8.9 -99.0000 4.436 193.2 6 20.21 6 35.18 6 1.644 6 4 4 249.7 8.2312 57.6 0.083 7.794 32.5460 4.42 192.5 241 20 8.9 -99.0000 4.391 191.2 20.42 35.53 1.659 3 3 299.2 8.2026 56.9 0.082 7.784 32.5765 4.37 190.2 241 19 8.9 -99.0000 4.338 188.9 20.76 36.30 1.683 1 1 375.1 8.1200 51.9 0.093 7.787 32.6409 4.40 191.6 62 17 8.1 -99.0000 4.376 190.5 20.58 35.73 1.645 2 2 375.1 8.1199 51.7 0.091 7.787 32.6409 4.40 191.5 241 18 -99.0 -99.0000 -99.000 -99.0 -99.00 -99.00 -99.000