*2017/02/17 17:09:56.20 *IOS HEADER VERSION 2.0 2016/04/28 2016/06/13 IVF16 *FILE START TIME : UTC 2016/10/30 18:07:31.000 TIME INCREMENT : 0 0 0 0.125 0 ! (day hr min sec ms) NUMBER OF RECORDS : 98 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 1D13DE19 NUMBER OF CHANNELS : 8 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 8.220445 105.0731 2 Temperature:Primary 'deg C (ITS90)' 9.342757 12.20709 3 Fluorescence:URU:Wetlabs mg/m^3 0.244 1.0803 4 pH:SBE:Nominal n/a 8.009714 8.329444 5 Salinity:T0:C0 PSS-78 32.32958 33.11668 6 Oxygen:Dissolved:SBE mL/L 3.382 6.142 7 Oxygen:Dissolved:SBE umol/kg 147.2143 267.6364 8 Number_of_bin_records n/a 4 16 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2016-40\Pro $END *ADMINISTRATION MISSION : 2016-40 AGENCY : PBS, Coastal & Oceanic Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : Basin & Coastal Scale Indicators SCIENTIST : Morris J. PLATFORM : Frosti *LOCATION GEOGRAPHIC AREA : WCVI STATION : EP03 EVENT NUMBER : 46 LATITUDE : 49 16.84500 N ! (deg min) LONGITUDE : 126 41.38100 W ! (deg min) WATER DEPTH : 114 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-25 SERIAL NUMBER : 0404 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2095 Conductivity ' ' 1764 'Pressure:Strain Gauge' ' ' 0482 pH ' ' 0852 'Oxygen:SBE 43' ' ' 1176 'Fluorometer:WET Labs ECO-AFL/FL' ' ' FLRTD-4185 $END $REMARKS SOFTWARE VERSION 1.59 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.5.2 2017/02/06 15:28:56 3929 3929 CLEAN 5.2.2 2017/02/06 15:29:12 3929 3929 ADTIMCH 4.4 2017/02/14 13:12:44 3929 3929 MERGEHDR 1.3 2017/02/14 13:21:23 3929 3929 SHIFTDAT 3.4 2017/02/15 14:22:40 3929 3929 DELETE 6.3 2017/02/15 15:42:50 3929 796 CLIP 1.3 2017/02/15 15:42:59 796 786 CTDEDIT 5.2.3 2017/02/15 17:05:05 786 768 CALIB 11.9 2017/02/17 16:42:04 768 768 CLEAN 5.2.2 2017/02/17 16:48:06 768 768 CHGUNITS 3.1.1 2017/02/17 16:48:13 768 768 BINAVE 4.2 2017/02/17 17:09:44 768 98 REMOVECH 8.2 2017/02/17 17:09:49 98 98 HDREDIT2 3.1.1 2017/02/17 17:09:56 ? ? $END $REMARKS -CLEAN functions: 2017/02/06 15:29:08 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure:StrainGauge Set event to last 4 characters of file name -The following ADTIMCH parameters were used. Add -17.00 hours to times in header file section -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 10.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure NOT filtered. Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 5 points) will be deleted. Drop rate applies in the range 10.00 to 95.46 dbars Sample interval (from FILE section of header) = 0.125 seconds. -The following CLIP parameters were used. Clip by Channel Range Clip Channel: Pressure:StrainGauge Min,Max = 7.700, 500.000 Time Not Available in File -CTDEDIT v5.2.3 2017/02/15 17:05:05 18 records were deleted in this editing session. 39 changes in channel Salinity:T0:C0 -CALIB parameters: 2017/02/17 16:42:04 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2016-40\Processing\doc\2016-40-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 5 Fluorescence:URU:Wetlabs:ECO- mg/m^3 10 0.2750000E+00 0.1000000E+01 -CLEAN functions: 2017/02/17 16:48:05 20 Reset #RECS, MIN & MAX values in header. Insert Pad Values in Channel: Oxygen:Dissolved:SBE [mL/L] where channel Oxygen:Dissolved:SBE [mL/L] is in the range -1000 to -0.1E-03 8 data records in pad range. Set header Start and End times from the data. *FAILED* -CHANGE units: Temperature reference channel: Temperature:Primary Salinity reference channel: Salinity:T0:C0 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -The following BINAVE parameters were used: Bin channel = Press* Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2017/02/17 17:09:49 The following CHANNEL(S) were removed: Scan_Number Conductivity:Primary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Flag -HEADER EDITS: 2017/02/17 17:09:56 Applied edit header: P:\Cruise_Data_Processing\2016-40\Processing\doc\2016-40-hdr.txt Channel 1: Pressure [decibar] Name: Pressure:StrainGauge ==> Pressure Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:URU:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 $END *COMMENTS SBE HEADER Sea-Bird SBE25 Data File: FileName = \\WATERPROPERTIES\Data\2016-40\2016-40-046.hex Software Version 1.59 Temperature SN = 2095 Conductivity SN = 1764 System UpLoad Time = Oct 30 2016 19:01:11 2016-40 CFS Frosti WCVI John Morris EP 03 ds SBE 25 CTD V 4.1c SN 0404 10/31/16 18:55:15.684 external pressure sensor, range = 10153 psia, tcval = 0 xtal = 9437232 clk = 32767.988 vmain = 10.9 iop = 194 vlith = 5.1 ncasts = 6 samples = 25725 free = 619248 lwait = 0 msec CTD configuration: number of scans averaged = 1, data stored at 8 scans per second real time data transmitted at 8 scans per second minimum conductivity frequency for pump turn on = 3100 pump delay = 45 seconds battery type = ALKALINE 3 external voltages sampled stored voltage # 0 = external voltage 0 stored voltage # 1 = external voltage 4 stored voltage # 2 = external voltage 5 S> dh cast 2 10/31 11:07:31 smpls 5792 to 9720 nv = 3 avg = 1 stp = switch of S> # nquan = 11 # nvalues = 3929 # units = specified # name 0 = scan: Scan Count # name 1 = prSM: Pressure, Strain Gauge [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = c0S/m: Conductivity [S/m] # name 4 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 5 = ph: pH # name 6 = sbeox0V: Oxygen raw, SBE 43 [V] # name 7 = dz/dtM: Descent Rate [m/s] # name 8 = sal00: Salinity, Practical [PSU] # name 9 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 10 = flag: flag # span 0 = 1, 3929 # span 1 = -1.075, 105.461 # span 2 = 9.2845, 12.2302 # span 3 = 0.411766, 3.745898 # span 4 = -0.2750, 36.8434 # span 5 = 7.929, 8.335 # span 6 = 0.0000, 2.0842 # span 7 = -2.807, 2.808 # span 8 = 2.9638, 33.1375 # span 9 = -2.3747, 19.3779 # span 10 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.125 # start_time = Oct 31 2016 11:07:31 [Instrument's time stamp, header] # bad_flag = -9.990e-29 # # # # # 2095 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.13052507e-003 # 6.28715579e-004 # 2.08569538e-005 # 2.14210359e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 03-Jan-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15152248e+000 # 4.86957830e-001 # -5.49147277e-004 # 5.07581267e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0482 # 04-Jan-16 # 6.407317e+003 # -1.752122e+000 # -6.261155e-006 # 0.00000 # # # # # # 0852 # 18-Jan-16 # 4.6254 # 2.5297 # # # # # # 1176 # 19-Dec-15 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 6.5752e-001 # -0.5219 # -4.0682e-003 # 1.6157e-004 # -2.8213e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.6900 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # FLRTD-4185 # 02- Nov-2015 # 2.50000000e+001 # # 0.0110 # # # # datcnv_date = Feb 03 2017 09:26:32, 7.23.2 [datcnv_vars = 8] # datcnv_in = P:\Cruise_Data_Processing\2016-40\RAW\CTD\2016-40-046.hex P:\Cruis e_Data_Processing\2016-40\Processing\doc\2016-40-ctd0404.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wfilter_date = Feb 06 2017 14:59:47, 7.23.2 # wfilter_in = P:\Cruise_Data_Processing\2016-40\Processing\convert\2016-40-0046 .cnv # wfilter_excl_bad_scans = yes # wfilter_action prSM = cosine, 9 # wfilter_action t090C = cosine, 5 # wfilter_action c0S/m = cosine, 5 # alignctd_date = Feb 06 2017 15:06:52, 7.23.2 # alignctd_in = P:\Cruise_Data_Processing\2016-40\Processing\wfilter\2016-40-004 6.cnv # alignctd_adv = sbeox0V 2.500 # celltm_date = Feb 06 2017 15:07:30, 7.23.2 # celltm_in = P:\Cruise_Data_Processing\2016-40\Processing\align\2016-40-0046.cn v # celltm_alpha = 0.0400, 0.0000 # celltm_tau = 8.0000, 0.0000 # celltm_temp_sensor_use_for_cond = primary, # Derive_date = Feb 06 2017 15:08:21, 7.23.2 [derive_vars = 2] # Derive_in = P:\Cruise_Data_Processing\2016-40\Processing\celltm\2016-40-0046.c nv P:\Cruise_Data_Processing\2016-30\Processing\doc\2016-30-ctd0404.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove records that appear to be corrupted by shed wakes; salinity was cleaned. --------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Fluorescence, pH and Oxygen:Dissolved:SBE channels are nominal and unedited except that some records were removed in editing temperature and salinity. While the CTD fluorescence data are expressed in concentration units, they do not always compare well to extracted chlorophyll samples, particularly for casts far from shore. There was no pH or dissolved oxygen calibration sampling. Salinity sampling was too limited to justify recalibration as samples all came from near the surface and at somewhat variable depth. However, the comparison of CTD salinity with bottle salinity suggests that the CTD is reading within 0.005psu. Comparison of fluorescence with extracted chlorophyll samples was used to help determine a suitable correction to the offset for the fluorometer as there were many negative fluorescence; that correction removed the many negative values found using the offset from the configuration file. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data are available. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see the report: 2016-40-proc.doc. --------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS !Name Units Fmla Pad Coefficients !---------------------------------- -------- ---- ------ ------------ Fluorescence:URU:Wetlabs:ECO-AFL mg/m^3 10 -99 () (0.275 1) $END !--1--- ---2---- ---3--- ---4--- ---5---- --6--- --7-- -8-- !Pressu Temperat Fluores pH:SBE: Salinity Oxygen Oxyge Numb !re ure: cence: Nominal :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- ------- -------- ------ ----- ---- *END OF HEADER 8.2 12.2071 0.716 8.329 32.3296 6.08 264.9 9 9.0 12.1996 0.789 8.327 32.3302 6.07 264.3 6 10.0 12.1866 0.809 8.327 32.3306 6.06 264.2 8 11.1 12.1758 0.752 8.325 32.3309 6.07 264.3 8 12.0 12.1448 0.775 8.325 32.3325 6.06 264.3 8 13.0 12.1314 0.786 8.325 32.3330 6.07 264.6 4 14.1 12.1168 0.756 8.323 32.3337 6.06 264.0 8 15.0 12.0934 0.751 8.321 32.3342 6.06 263.9 5 16.0 12.0714 0.754 8.324 32.3367 6.08 264.9 7 17.0 12.0535 0.744 8.325 32.3437 6.11 266.4 8 18.0 12.0468 0.866 8.326 32.3455 6.14 267.4 8 18.9 12.0462 0.893 8.326 32.3455 6.14 267.6 8 20.0 12.0459 0.911 8.327 32.3458 6.14 267.4 6 21.0 12.0461 0.903 8.328 32.3463 6.14 267.4 7 22.0 12.0464 0.903 8.329 32.3467 6.14 267.6 7 23.0 12.0466 0.916 8.329 32.3469 6.13 267.3 4 24.0 12.0468 0.974 8.328 32.3471 6.14 267.6 10 24.9 12.0480 0.938 8.328 32.3475 6.14 267.6 11 26.0 12.0508 0.921 8.329 32.3480 6.14 267.4 6 27.0 12.0501 0.942 8.327 32.3480 6.13 267.3 7 28.0 12.0518 0.946 8.328 32.3483 6.13 267.2 9 29.0 12.0538 0.963 8.328 32.3496 6.14 267.6 9 30.0 12.0541 0.959 8.327 32.3499 6.14 267.4 7 31.1 12.0545 0.968 8.326 32.3510 6.13 267.0 7 32.2 12.0544 0.912 8.326 32.3512 6.11 266.4 8 33.0 12.0527 0.977 8.325 32.3522 6.11 266.2 6 33.8 12.0396 1.029 8.324 32.3553 6.11 266.1 7 35.0 12.0346 1.038 8.322 32.3559 6.10 265.9 7 36.0 12.0315 1.042 8.322 32.3584 6.09 265.4 7 37.1 12.0302 1.059 8.321 32.3599 6.08 265.1 7 38.0 12.0299 1.003 8.321 32.3609 6.09 265.4 7 38.9 12.0288 0.989 8.321 32.3624 6.08 265.1 10 39.9 12.0227 1.080 8.321 32.3684 6.08 264.7 10 41.0 12.0077 0.989 8.320 32.3777 6.05 263.7 10 42.0 11.9911 0.977 8.316 32.3848 5.97 260.0 5 43.1 11.9730 1.007 8.304 32.3898 5.83 254.1 8 44.0 11.8064 0.977 8.275 32.3736 5.59 243.6 7 44.9 11.7333 0.950 8.264 32.3691 5.51 240.2 9 46.1 11.6930 0.813 8.257 32.3665 5.45 237.3 8 47.0 11.6296 0.737 8.247 32.3703 5.35 233.2 16 48.1 11.5942 0.809 8.240 32.3706 5.29 230.3 8 49.0 11.5304 0.631 8.232 32.3753 5.21 226.8 9 49.9 11.4727 0.614 8.222 32.3829 5.15 224.5 9 51.1 11.4162 0.560 8.224 32.3857 5.15 224.5 6 52.0 11.4529 0.523 8.228 32.4109 5.17 225.1 8 53.1 11.4551 0.515 8.230 32.4281 5.17 225.4 7 53.9 11.4328 0.541 8.226 32.4319 5.15 224.2 7 54.9 11.3889 0.523 8.222 32.4445 5.12 223.2 8 56.0 11.3495 0.505 8.217 32.4567 5.05 219.9 9 57.0 11.2853 0.480 8.201 32.4644 4.90 213.5 7 58.0 11.1505 0.434 8.188 32.4712 4.83 210.3 9 59.0 11.0865 0.397 8.183 32.4739 4.77 207.9 7 59.9 11.0404 0.397 8.170 32.4801 4.70 204.7 7 60.9 10.8808 0.383 8.157 32.4906 4.63 201.7 11 62.1 10.8289 0.359 8.153 32.4943 4.58 199.3 8 63.1 10.8214 0.336 8.148 32.4955 4.53 197.5 7 64.0 10.7501 0.341 8.137 32.4945 4.47 194.6 6 65.0 10.6474 0.359 8.128 32.4990 4.41 192.2 8 66.0 10.6241 0.340 8.125 32.5041 4.38 191.0 7 67.0 10.6178 0.336 8.125 32.5116 4.38 190.8 9 68.1 10.6198 0.336 8.125 32.5187 4.38 190.8 8 69.1 10.6315 0.336 8.127 32.5303 4.39 191.2 6 70.0 10.6079 0.310 8.121 32.5620 4.33 188.6 6 71.0 10.5590 0.339 8.117 32.5774 4.28 186.6 9 72.0 10.5079 0.314 8.111 32.5995 4.20 182.8 7 72.9 10.3927 0.336 8.109 32.6459 4.17 181.4 4 74.1 10.3070 0.305 8.110 32.7021 4.18 182.1 7 75.1 10.2497 0.288 8.117 32.7529 4.23 184.1 7 76.0 10.2479 0.287 8.126 32.7699 4.28 186.5 13 77.0 10.2702 0.290 8.144 32.7895 4.43 192.9 12 78.0 10.2995 0.305 8.167 32.8182 4.59 199.9 10 79.0 10.3128 0.323 8.174 32.8494 4.64 202.0 7 80.0 10.2754 0.327 8.173 32.8614 4.64 201.9 7 80.9 10.2427 0.318 8.163 32.8731 4.57 198.8 7 82.2 10.1706 0.336 8.145 32.8953 4.42 192.7 5 83.0 10.1039 0.282 8.137 32.9168 4.34 189.1 9 84.0 10.0625 0.298 8.123 32.9274 4.22 183.8 8 85.0 9.9970 0.305 8.113 32.9508 4.14 180.1 10 85.9 9.9059 0.301 8.102 32.9727 4.06 176.6 7 87.0 9.8912 0.287 8.095 32.9715 3.97 173.0 10 88.0 9.8141 0.282 8.074 32.9855 3.85 167.8 9 89.1 9.7383 0.294 8.064 32.9907 3.78 164.6 8 90.0 9.7338 0.275 8.062 32.9908 3.77 164.0 6 91.0 9.7302 0.275 8.060 32.9922 3.76 163.6 8 92.0 9.7286 0.275 8.060 32.9929 3.75 163.2 9 93.0 9.7253 0.267 8.059 32.9938 3.74 162.7 12 94.0 9.7211 0.263 8.056 32.9949 3.71 161.6 10 95.0 9.7049 0.275 8.049 32.9935 3.67 160.0 9 96.0 9.6994 0.275 8.047 32.9924 3.65 159.1 6 96.9 9.6924 0.263 8.044 32.9923 3.64 158.3 8 98.1 9.6848 0.244 8.042 32.9913 3.62 157.7 7 99.1 9.6812 0.258 8.040 32.9910 3.62 157.5 9 100.0 9.6795 0.266 8.040 32.9915 3.60 156.8 10 101.0 9.6742 0.275 8.040 32.9930 3.59 156.4 6 102.0 9.6625 0.275 8.036 32.9969 3.58 156.1 7 102.8 9.6420 0.267 8.036 33.0036 3.58 155.6 4 104.1 9.5339 0.244 8.019 33.0489 3.43 149.3 8 105.1 9.3428 0.244 8.010 33.1167 3.38 147.2 7