*2016/04/08 16:16:03.52 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2015/10/16 22:49:01.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 57 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : CE850BC5 NUMBER OF CHANNELS : 10 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 2.199 57.819 2 Temperature:Primary 'deg C (ITS90)' 12.1902 13.5047 3 Transmissivity %/metre 54.8 60.4 4 Fluorescence:URU:Seapoint mg/m^3 0.297 1.657 5 PAR uE/m^2/sec 0.107 162.233 6 pH:SBE:Nominal n/a 8.643 8.736 7 Salinity:T0:C0 PSS-78 32.0382 32.2948 8 Oxygen:Dissolved:SBE mL/L 5.273 5.998 9 Oxygen:Dissolved:SBE umol/kg 229.7859 261.4913 10 Number_of_bin_records n/a 20 49 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 6 F ' ' 1 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 7 F ' ' 1 6 -99 ' ' 8 F ' ' 3 7 -99 ' ' 9 F ' ' 4 8 -99 ' ' 7 F ' ' 2 9 -99 ' ' 6 F ' ' 1 10 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2015-61\Pro $END *ADMINISTRATION MISSION : 2015-61 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : World Class Oil Tanker / Cape Scott Environment SCIENTIST : Romaine S. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : North-West Coast Vancouver Island STATION : CS07 EVENT NUMBER : 45 LATITUDE : 51 4.70000 N ! (deg min) LONGITUDE : 128 43.92000 W ! (deg min) ALTIMETER (M) : 9.43 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------------- -------------- ---------- Temperature ' ' 4752 Conductivity ' ' 3396 'Pressure:Digiquartz with TC' ' ' 0585 Temperature:2 ' ' 2449 Conductivity:2 ' ' 2399 Fluorometer:Seapoint ' ' 3685 'Oxygen:SBE 43' ' ' 1119 'Transmissometer:WET Labs C-Star' ' ' 1185DR pH ' ' 0692 PAR/Irradiance:Biospherical/Licor ' ' 4615 Altimeter ' ' ' ' $END $REMARKS SOFTWARE VERSION SEASAVE V 7.23.2 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.4.1 2016/02/26 11:37:47 12411 12411 CLEAN 5.2.1 2016/02/26 11:47:46 12411 12411 SHIFTDAT 3.4 2016/03/08 11:51:10 12411 12411 SHIFTDAT 3.4 2016/03/08 12:08:22 12411 12411 SHIFTDAT 3.4 2016/03/08 15:07:57 12411 12411 DELETE 6.3 2016/03/08 15:18:47 12411 1658 CTDEDIT 5.0.4 2016/04/05 08:21:22 1658 1568 CALIB 11.8.1 2016/04/05 16:31:53 1568 1568 FILTERS 4.3 2016/04/05 16:35:08 1568 1568 BINAVE 4.2 2016/04/05 16:40:36 1568 57 REMOVECH 8.2 2016/04/05 16:58:51 57 57 CHGUNITS 3.1 2016/04/05 16:58:57 57 57 REORDER 1.3.1 2016/04/05 16:59:03 ? ? HDREDIT2 3.0.2 2016/04/08 16:16:03 ? ? $END $REMARKS -CLEAN functions: 2016/02/26 11:47:07 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 90.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 48.56 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2016/04/05 08:21:22 90 records were deleted in this editing session. 18 changes in channel Salinity:T0:C0 -CALIB parameters: 2016/04/05 16:31:53 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2015-61\Processing\doc\2015-61-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 15 Salinity:T0:C0 PSS-78 10 -0.3000000E-02 0.1000000E+01 17 Oxygen:Dissolved:SBE mL/L 10 0.8060000E-01 0.1036300E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2016/04/05 16:58:51 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Altimeter [metres] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: Temperature reference channel: Temp* Salinity reference channel: Sal* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2016/04/08 16:16:03 Applied edit header: P:\Cruise_Data_Processing\2015-61\Processing\doc\2015-61-HDR.TXT Channel 1: Pressure [decibar] Format: F11.2 ==> F7.1 Channel 5: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 8: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 6: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\CTD Data\2015-61\2015-61-0045.hex Software Version Seasave V 7.23.2 Temperature SN = 4752 Conductivity SN = 3396 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Oct 16 2015 22:55:08 NMEA Latitude = 51 04.70 N NMEA Longitude = 128 43.92 W NMEA UTC (Time) = Oct 16 2015 22:49:01 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Mission: 2015-61 Ship: J.P. Tully Station: CS07 Depth: 66 System UTC = Oct 16 2015 22:55:08 # nquan = 18 # nvalues = 12411 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = CStarTr0: Beam Transmission, WET Labs C-Star [%] # name 7 = flSP: Fluorescence, Seapoint # name 8 = sbeox0V: Oxygen raw, SBE 43 [V] # name 9 = par: PAR/Irradiance, Biospherical/Licor # name 10 = ph: pH # name 11 = altM: Altimeter [m] # name 12 = dz/dtM: Descent Rate [m/s] # name 13 = pumps: Pump Status # name 14 = sal00: Salinity, Practical [PSU] # name 15 = sal11: Salinity, Practical, 2 [PSU] # name 16 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 1 # name 17 = flag: flag # span 0 = 1, 12411 # span 1 = 1.720, 58.562 # span 2 = 12.1869, 13.5326 # span 3 = 12.1884, 13.5326 # span 4 = 3.741063, 3.833491 # span 5 = 3.752735, 3.845489 # span 6 = 73.8646, 88.2705 # span 7 = 2.4420e-01, 3.2357e+00 # span 8 = 2.3467, 2.6912 # span 9 = 8.7846e-02, 3.7466e+02 # span 10 = 8.626, 8.745 # span 11 = 0.00, 66.28 # span 12 = -1.221, 1.205 # span 13 = 0, 1 # span 14 = 32.0284, 32.3024 # span 15 = 32.1458, 32.4119 # span 16 = 4.9759, 5.7347 # span 17 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Oct 16 2015 22:49:01 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 4752 # 23-Jan-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35902423e-003 # 6.36413981e-004 # 2.06309769e-005 # 1.71365270e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3396 # 19-Dec-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -9.91941065e+000 # 1.31439274e+000 # 3.00845560e-005 # 6.13621985e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0585 # 30-Dec-13 # -3.951550e+004 # -4.415130e-001 # 1.282560e-002 # 3.560600e-002 # 0.000000e+000 # 3.030045e+001 # -4.415690e-004 # 4.342710e-006 # 1.736800e-009 # 0.99994600 # -2.11246 # 0.000000e+000 # 1.288270e-002 # -8.164490e+000 # # # # # # 2449 # 06-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35517974e-003 # 6.43485967e-004 # 2.33381062e-005 # 2.21338578e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2399 # 17-Jan-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.08277491e+001 # 1.61475240e+000 # 1.24520243e-003 # 1.93505039e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 3685 # # # 2 # 0.000 # # # # # # # # # 1119 # 21-Jan-14 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.4901e-001 # -0.5263 # -1.9196e-003 # 8.5361e-005 # -1.2856e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.0400 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 1185DR # Feb 2014 # 19.6968 # -1.1227 # 0.000 # # # # # # 0692 # Jan 2015 # 4.6327 # 2.5317 # # # # # # 4615 # 16-Mar-2011 # 1.00000000 # 0.00000000 # 3367003367.00000000 # 1.00000000 # -0.40341896 # # # # # # # # 15.000 # 0.000 # # # # # # # datcnv_date = Feb 15 2016 16:09:32, 7.23.2 [datcnv_vars = 14] # datcnv_in = P:\Cruise_Data_Processing\2015-61\RAW\CTD\2015-61-0045.hex P:\Crui se_Data_Processing\2015-61\Processing\doc\2015-61-ctd1.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Feb 15 2016 16:15:06, 7.23.2 # wildedit_in = P:\Cruise_Data_Processing\2015-61\Processing\convert\2015-61-004 5.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Feb 16 2016 11:25:35, 7.23.2 # alignctd_in = P:\Cruise_Data_Processing\2015-61\Processing\wildedit\2015-61-00 45.cnv # alignctd_adv = sbeox0V 4.500 # celltm_date = Feb 16 2016 12:15:11, 7.23.2 # celltm_in = P:\Cruise_Data_Processing\2015-61\Processing\align\2015-61-0045.cn v # celltm_alpha = 0.0245, 0.0245 # celltm_tau = 9.5000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Feb 16 2016 12:52:46, 7.23.2 [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2015-61\Processing\celltm\2015-61-0045.c nv P:\Cruise_Data_Processing\2015-61\Processing\doc\2015-61-ctd1.XMLCON # derive_time_window_docdt = seconds: 1 # derive_ox_tau_correction = yes # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove a few surface records and some records corrupted by shed wakes; salinity was cleaned. ---------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Fluorescence, transmissivity, PAR and pH data are nominal and unedited except that some records were removed in editing temperature and salinity. The comparison of CTD salinity with bottle salinity showed a lot of variability. The analyst found the salinity analysis precision to be poor, but noted that there were only 4 duplicates available. The bottle salinity values appear to be too high, on average, based on a post-cruise calibration of one set of temperature/conductivity sensors. This is likely due to a combination of small effects: evaporation and adsorption of samples and incomplete flushing of Niskin bottles. The primary salinity for the first configuration was recalibrated based on the post-cruise calibration. No correction was applied to the primary salinity for the second configuration. For details on how the transmissivity calibration parameters were calculated see the document in folder "\cruise_data\documents\transmissivity". Dissolved oxygen was calibrated using the method described in SeaBird Application Note #64-2, June 2012 revision, except that a small offset in the fit was allowed. The Oxygen:Dissolved:SBE data are considered, very roughly, to be: ±0.5 mL/L from 0 to 50db ±0.2 mL/L from 50db to 250db ±0.05 mL/L below 250db WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were collected. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see the report: 2015-61_Processing_Report.doc. ---------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (-0.3E-02 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (0.806E-01 1.0363) $END !--1--- ---2---- --3-- ---4--- --5--- ---6--- ---7---- --8--- --9-- -10- !Pressu Temperat Trans Fluores PAR pH:SBE: Salinity Oxygen Oxyge Numb !re ure: missi cence: Nominal :T0:C0 : n: er_o ! Primary vity URU: Dissol Disso ~bin ! Seapoin ved: lved: _rec ! t SBE SBE ords !------ -------- ----- ------- ------ ------- -------- ------ ----- ---- *END OF HEADER 2.2 13.5015 55.2 1.302 162.2 8.736 32.0384 5.98 260.8 21 2.9 13.5012 54.9 1.494 98.7 8.736 32.0387 5.99 260.9 27 4.0 13.5018 55.3 1.641 82.2 8.736 32.0382 5.99 261.1 22 5.1 13.4995 55.2 1.481 63.9 8.736 32.0390 5.99 260.9 38 6.0 13.4975 54.9 1.187 52.5 8.736 32.0397 5.98 260.9 49 7.0 13.4970 55.5 1.254 46.6 8.736 32.0397 6.00 261.4 25 8.0 13.4990 55.1 1.551 39.1 8.736 32.0407 5.99 261.2 23 9.0 13.5047 55.4 1.426 32.1 8.736 32.0401 5.99 261.2 25 10.0 13.5038 55.4 1.261 26.6 8.736 32.0402 5.99 261.1 33 11.0 13.5036 55.6 1.503 22.5 8.736 32.0404 5.99 261.2 32 12.0 13.4993 55.6 1.306 19.7 8.736 32.0409 5.99 260.9 32 13.0 13.5005 54.8 1.477 17.3 8.736 32.0405 5.99 261.2 26 14.0 13.5020 55.4 1.427 15.1 8.736 32.0410 6.00 261.5 21 15.0 13.5012 55.3 1.494 13.0 8.736 32.0411 5.99 261.3 21 16.0 13.5002 55.6 1.512 10.9 8.736 32.0411 5.99 261.2 25 17.0 13.5015 55.5 1.461 9.3 8.736 32.0398 5.99 261.1 34 18.0 13.5021 55.5 1.644 8.3 8.736 32.0401 5.99 261.1 33 19.0 13.5032 55.4 1.555 7.2 8.735 32.0408 5.99 261.1 26 20.0 13.5031 55.5 1.492 6.4 8.736 32.0410 5.98 260.9 24 21.0 13.5015 55.5 1.324 5.7 8.735 32.0420 5.98 260.9 26 22.0 13.5010 55.1 1.657 5.0 8.735 32.0421 5.99 261.1 26 23.0 13.5007 55.1 1.498 4.3 8.734 32.0423 5.99 261.2 25 24.0 13.5011 55.4 1.448 3.8 8.734 32.0420 5.99 261.1 28 25.0 13.5013 55.3 1.417 3.4 8.733 32.0420 5.99 261.0 29 26.0 13.5023 54.8 1.381 3.0 8.733 32.0412 5.98 260.9 24 27.0 13.5008 55.6 1.428 2.7 8.732 32.0424 5.98 260.8 22 28.0 13.5010 55.9 1.371 2.3 8.732 32.0421 5.97 260.2 24 29.0 13.5011 55.9 1.387 2.0 8.732 32.0420 5.96 259.7 32 30.0 13.4919 56.0 1.398 1.8 8.731 32.0443 5.93 258.7 28 31.0 13.4853 56.0 1.198 1.6 8.731 32.0463 5.92 258.0 31 32.0 13.4671 56.8 1.100 1.4 8.728 32.0494 5.88 256.3 26 33.0 13.4605 57.0 1.231 1.3 8.728 32.0500 5.83 254.3 22 34.0 13.4501 57.1 1.205 1.1 8.728 32.0516 5.78 251.9 21 35.0 13.4115 57.8 0.851 1.0 8.727 32.0585 5.73 249.7 20 36.0 13.3846 58.5 0.852 0.9 8.726 32.0635 5.69 248.0 23 37.0 13.2981 59.0 0.781 0.8 8.725 32.0814 5.66 246.7 27 38.0 13.1954 59.5 0.623 0.7 8.722 32.0983 5.63 245.2 31 39.0 13.1048 59.8 0.527 0.7 8.715 32.1148 5.58 243.4 35 40.0 13.0365 60.1 0.458 0.6 8.705 32.1312 5.53 241.1 31 41.0 12.9824 60.2 0.408 0.6 8.702 32.1444 5.49 239.4 26 42.0 12.9205 60.3 0.358 0.5 8.697 32.1572 5.47 238.4 23 43.0 12.8354 60.4 0.357 0.5 8.694 32.1725 5.46 237.9 22 44.0 12.7711 60.4 0.344 0.4 8.692 32.1819 5.44 237.3 22 45.0 12.6997 60.4 0.337 0.4 8.683 32.1924 5.41 235.8 25 46.0 12.6491 60.2 0.344 0.3 8.673 32.1995 5.37 234.2 33 47.0 12.5786 60.1 0.355 0.3 8.668 32.2102 5.35 233.1 34 48.0 12.4766 60.0 0.342 0.3 8.665 32.2316 5.33 232.2 26 49.0 12.4196 59.8 0.362 0.3 8.663 32.2437 5.32 231.6 22 50.0 12.3837 59.6 0.329 0.2 8.660 32.2495 5.30 231.1 22 51.0 12.3277 59.3 0.297 0.2 8.658 32.2597 5.29 230.8 24 52.0 12.2775 59.4 0.319 0.2 8.655 32.2696 5.29 230.4 27 53.0 12.2495 59.4 0.342 0.2 8.651 32.2754 5.28 230.2 27 54.0 12.2249 59.1 0.336 0.2 8.648 32.2814 5.28 230.0 30 55.0 12.2180 59.0 0.332 0.1 8.646 32.2833 5.27 229.8 35 56.0 12.2059 59.0 0.324 0.1 8.645 32.2872 5.28 230.0 31 57.0 12.1983 58.9 0.313 0.1 8.645 32.2901 5.29 230.5 32 57.8 12.1902 58.5 0.342 0.1 8.643 32.2948 5.28 230.3 26