*2016/04/08 16:16:03.46 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2015/10/16 21:54:20.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 58 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : AA650B79 NUMBER OF CHANNELS : 10 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 1.426 57.869 2 Temperature:Primary 'deg C (ITS90)' 12.8838 13.2904 3 Transmissivity %/metre 55.5 60.8 4 Fluorescence:URU:Seapoint mg/m^3 0.337 1.235 5 PAR uE/m^2/sec 0.267 735.005 6 pH:SBE:Nominal n/a 8.702 8.744 7 Salinity:T0:C0 PSS-78 31.9834 32.103 8 Oxygen:Dissolved:SBE mL/L 5.566 5.902 9 Oxygen:Dissolved:SBE umol/kg 242.6242 257.3062 10 Number_of_bin_records n/a 6 61 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 6 F ' ' 1 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 7 F ' ' 1 6 -99 ' ' 8 F ' ' 3 7 -99 ' ' 9 F ' ' 4 8 -99 ' ' 7 F ' ' 2 9 -99 ' ' 6 F ' ' 1 10 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2015-61\Pro $END *ADMINISTRATION MISSION : 2015-61 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : World Class Oil Tanker / Cape Scott Environment SCIENTIST : Romaine S. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : North-West Coast Vancouver Island STATION : CS06 EVENT NUMBER : 44 LATITUDE : 51 0.23000 N ! (deg min) LONGITUDE : 128 49.89000 W ! (deg min) ALTIMETER (M) : 9.6 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------------- -------------- ---------- Temperature ' ' 4752 Conductivity ' ' 3396 'Pressure:Digiquartz with TC' ' ' 0585 Temperature:2 ' ' 2449 Conductivity:2 ' ' 2399 Fluorometer:Seapoint ' ' 3685 'Oxygen:SBE 43' ' ' 1119 'Transmissometer:WET Labs C-Star' ' ' 1185DR pH ' ' 0692 PAR/Irradiance:Biospherical/Licor ' ' 4615 Altimeter ' ' ' ' $END $REMARKS SOFTWARE VERSION SEASAVE V 7.23.2 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.4.1 2016/02/26 11:37:46 5179 5179 CLEAN 5.2.1 2016/02/26 11:47:43 5179 5179 SHIFTDAT 3.4 2016/03/08 11:51:08 5179 5179 SHIFTDAT 3.4 2016/03/08 12:08:21 5179 5179 SHIFTDAT 3.4 2016/03/08 15:07:55 5179 5179 DELETE 6.3 2016/03/08 15:18:45 5179 2082 CTDEDIT 5.0.4 2016/04/05 08:17:18 2082 1939 CALIB 11.8.1 2016/04/05 16:31:52 1939 1939 FILTERS 4.3 2016/04/05 16:35:08 1939 1939 BINAVE 4.2 2016/04/05 16:40:35 1939 58 REMOVECH 8.2 2016/04/05 16:58:50 58 58 CHGUNITS 3.1 2016/04/05 16:58:57 58 58 REORDER 1.3.1 2016/04/05 16:59:03 ? ? HDREDIT2 3.0.2 2016/04/08 16:16:03 ? ? $END $REMARKS -CLEAN functions: 2016/02/26 11:47:07 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 90.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 48.49 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2016/04/05 08:17:18 143 records were deleted in this editing session. 35 changes in channel Salinity:T0:C0 -CALIB parameters: 2016/04/05 16:31:52 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2015-61\Processing\doc\2015-61-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 15 Salinity:T0:C0 PSS-78 10 -0.3000000E-02 0.1000000E+01 17 Oxygen:Dissolved:SBE mL/L 10 0.8060000E-01 0.1036300E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2016/04/05 16:58:50 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Altimeter [metres] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: Temperature reference channel: Temp* Salinity reference channel: Sal* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2016/04/08 16:16:03 Applied edit header: P:\Cruise_Data_Processing\2015-61\Processing\doc\2015-61-HDR.TXT Channel 1: Pressure [decibar] Format: F11.2 ==> F7.1 Channel 5: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 8: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 6: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\CTD Data\2015-61\2015-61-0044.hex Software Version Seasave V 7.23.2 Temperature SN = 4752 Conductivity SN = 3396 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Oct 16 2015 21:59:33 NMEA Latitude = 51 00.23 N NMEA Longitude = 128 49.89 W NMEA UTC (Time) = Oct 16 2015 21:54:20 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Mission: 2015-61 Ship: J.P. Tully Station: CS06 Depth: 66 System UTC = Oct 16 2015 21:59:33 # nquan = 18 # nvalues = 5179 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = CStarTr0: Beam Transmission, WET Labs C-Star [%] # name 7 = flSP: Fluorescence, Seapoint # name 8 = sbeox0V: Oxygen raw, SBE 43 [V] # name 9 = par: PAR/Irradiance, Biospherical/Licor # name 10 = ph: pH # name 11 = altM: Altimeter [m] # name 12 = dz/dtM: Descent Rate [m/s] # name 13 = pumps: Pump Status # name 14 = sal00: Salinity, Practical [PSU] # name 15 = sal11: Salinity, Practical, 2 [PSU] # name 16 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 1 # name 17 = flag: flag # span 0 = 1, 5179 # span 1 = 0.596, 58.493 # span 2 = 12.8798, 13.2925 # span 3 = 12.8811, 13.2936 # span 4 = 3.783213, 3.806281 # span 5 = 3.795209, 3.818235 # span 6 = 38.5595, 88.3907 # span 7 = 2.8083e-01, 3.5043e+00 # span 8 = 2.4884, 2.6398 # span 9 = 2.4917e-01, 7.6345e+02 # span 10 = 8.683, 8.755 # span 11 = 8.99, 65.40 # span 12 = -1.322, 1.057 # span 13 = 0, 1 # span 14 = 31.9828, 32.1080 # span 15 = 32.0872, 32.2205 # span 16 = 5.0237, 5.6301 # span 17 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Oct 16 2015 21:54:20 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 4752 # 23-Jan-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35902423e-003 # 6.36413981e-004 # 2.06309769e-005 # 1.71365270e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3396 # 19-Dec-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -9.91941065e+000 # 1.31439274e+000 # 3.00845560e-005 # 6.13621985e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0585 # 30-Dec-13 # -3.951550e+004 # -4.415130e-001 # 1.282560e-002 # 3.560600e-002 # 0.000000e+000 # 3.030045e+001 # -4.415690e-004 # 4.342710e-006 # 1.736800e-009 # 0.99994600 # -2.11246 # 0.000000e+000 # 1.288270e-002 # -8.164490e+000 # # # # # # 2449 # 06-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35517974e-003 # 6.43485967e-004 # 2.33381062e-005 # 2.21338578e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2399 # 17-Jan-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.08277491e+001 # 1.61475240e+000 # 1.24520243e-003 # 1.93505039e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 3685 # # # 2 # 0.000 # # # # # # # # # 1119 # 21-Jan-14 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.4901e-001 # -0.5263 # -1.9196e-003 # 8.5361e-005 # -1.2856e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.0400 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 1185DR # Feb 2014 # 19.6968 # -1.1227 # 0.000 # # # # # # 0692 # Jan 2015 # 4.6327 # 2.5317 # # # # # # 4615 # 16-Mar-2011 # 1.00000000 # 0.00000000 # 3367003367.00000000 # 1.00000000 # -0.40341896 # # # # # # # # 15.000 # 0.000 # # # # # # # datcnv_date = Feb 15 2016 16:09:31, 7.23.2 [datcnv_vars = 14] # datcnv_in = P:\Cruise_Data_Processing\2015-61\RAW\CTD\2015-61-0044.hex P:\Crui se_Data_Processing\2015-61\Processing\doc\2015-61-ctd1.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = yes # wildedit_date = Feb 15 2016 16:15:05, 7.23.2 # wildedit_in = P:\Cruise_Data_Processing\2015-61\Processing\convert\2015-61-004 4.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Feb 16 2016 11:25:34, 7.23.2 # alignctd_in = P:\Cruise_Data_Processing\2015-61\Processing\wildedit\2015-61-00 44.cnv # alignctd_adv = sbeox0V 4.500 # celltm_date = Feb 16 2016 12:15:10, 7.23.2 # celltm_in = P:\Cruise_Data_Processing\2015-61\Processing\align\2015-61-0044.cn v # celltm_alpha = 0.0245, 0.0245 # celltm_tau = 9.5000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Feb 16 2016 12:52:45, 7.23.2 [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2015-61\Processing\celltm\2015-61-0044.c nv P:\Cruise_Data_Processing\2015-61\Processing\doc\2015-61-ctd1.XMLCON # derive_time_window_docdt = seconds: 1 # derive_ox_tau_correction = yes # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some records corrupted by shed wakes; salinity was cleaned. ---------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Fluorescence, transmissivity, PAR and pH data are nominal and unedited except that some records were removed in editing temperature and salinity. The comparison of CTD salinity with bottle salinity showed a lot of variability. The analyst found the salinity analysis precision to be poor, but noted that there were only 4 duplicates available. The bottle salinity values appear to be too high, on average, based on a post-cruise calibration of one set of temperature/conductivity sensors. This is likely due to a combination of small effects: evaporation and adsorption of samples and incomplete flushing of Niskin bottles. The primary salinity for the first configuration was recalibrated based on the post-cruise calibration. No correction was applied to the primary salinity for the second configuration. For details on how the transmissivity calibration parameters were calculated see the document in folder "\cruise_data\documents\transmissivity". Dissolved oxygen was calibrated using the method described in SeaBird Application Note #64-2, June 2012 revision, except that a small offset in the fit was allowed. The Oxygen:Dissolved:SBE data are considered, very roughly, to be: ±0.5 mL/L from 0 to 50db ±0.2 mL/L from 50db to 250db ±0.05 mL/L below 250db WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were collected. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see the report: 2015-61_Processing_Report.doc. ---------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (-0.3E-02 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (0.806E-01 1.0363) $END !--1--- ---2---- --3-- ---4--- --5--- ---6--- ---7---- --8--- --9-- -10- !Pressu Temperat Trans Fluores PAR pH:SBE: Salinity Oxygen Oxyge Numb !re ure: missi cence: Nominal :T0:C0 : n: er_o ! Primary vity URU: Dissol Disso ~bin ! Seapoin ved: lved: _rec ! t SBE SBE ords !------ -------- ----- ------- ------ ------- -------- ------ ----- ---- *END OF HEADER 1.4 13.2860 55.5 0.934 735.0 8.742 31.9836 5.88 256.1 6 2.0 13.2859 56.7 0.832 436.2 8.744 31.9836 5.87 256.0 35 3.0 13.2853 57.3 0.833 173.0 8.743 31.9835 5.88 256.2 61 3.9 13.2852 57.7 0.879 164.9 8.743 31.9835 5.89 256.6 42 5.1 13.2853 57.4 1.045 128.6 8.743 31.9835 5.88 256.6 51 5.9 13.2857 57.5 1.010 105.7 8.743 31.9837 5.89 256.9 45 7.0 13.2868 57.8 0.970 91.9 8.742 31.9835 5.89 256.9 31 8.0 13.2873 57.7 0.980 75.0 8.742 31.9834 5.89 256.7 55 9.0 13.2875 57.7 0.949 62.8 8.742 31.9835 5.90 257.0 38 10.0 13.2878 57.9 0.881 53.6 8.741 31.9834 5.90 257.2 40 11.0 13.2883 57.7 0.872 47.5 8.741 31.9835 5.90 257.2 42 12.1 13.2891 57.8 0.917 38.7 8.741 31.9840 5.89 256.9 45 13.0 13.2898 57.8 1.208 32.9 8.741 31.9848 5.90 257.0 37 14.0 13.2895 57.6 1.127 30.4 8.742 31.9853 5.90 257.2 29 15.0 13.2888 57.7 1.003 27.4 8.742 31.9852 5.90 257.2 25 16.0 13.2886 57.8 1.106 23.7 8.742 31.9853 5.90 257.1 28 17.0 13.2878 58.0 0.946 19.2 8.741 31.9849 5.90 257.1 42 18.0 13.2882 58.0 0.935 16.4 8.741 31.9853 5.90 257.2 56 18.9 13.2885 57.8 1.090 16.1 8.741 31.9854 5.90 257.3 34 20.0 13.2888 58.0 1.115 14.7 8.740 31.9849 5.90 257.0 25 21.0 13.2885 58.0 0.927 12.6 8.741 31.9850 5.89 257.0 28 22.0 13.2885 58.0 1.090 10.7 8.740 31.9849 5.90 257.0 31 23.0 13.2896 58.0 1.031 9.2 8.739 31.9857 5.90 257.0 46 24.0 13.2904 58.1 0.950 8.4 8.739 31.9862 5.89 256.9 45 25.0 13.2900 55.5 1.126 7.7 8.739 31.9861 5.89 257.0 36 26.0 13.2883 56.9 1.080 6.9 8.738 31.9855 5.89 256.9 28 27.0 13.2876 57.4 0.938 6.1 8.738 31.9854 5.90 257.0 24 28.0 13.2882 56.1 1.013 5.4 8.737 31.9855 5.90 257.3 27 29.0 13.2883 57.4 1.036 4.9 8.737 31.9854 5.90 257.1 24 30.0 13.2887 56.4 0.973 4.4 8.737 31.9852 5.90 257.2 35 31.0 13.2894 57.4 0.975 3.9 8.737 31.9852 5.90 257.0 47 32.0 13.2890 57.8 0.987 3.5 8.737 31.9851 5.87 256.0 35 33.0 13.2888 57.9 1.080 3.1 8.737 31.9853 5.86 255.5 24 34.0 13.2835 58.0 1.235 2.8 8.737 31.9856 5.85 255.0 26 35.0 13.2569 58.0 0.853 2.5 8.737 31.9884 5.84 254.4 35 36.0 13.2426 58.9 0.717 2.3 8.736 31.9904 5.83 254.3 37 37.0 13.2295 58.9 0.681 2.0 8.733 31.9917 5.84 254.6 36 38.0 13.2370 58.4 0.811 1.8 8.733 31.9907 5.86 255.5 30 39.0 13.2275 58.7 0.738 1.7 8.732 31.9920 5.87 255.7 24 40.0 13.2568 58.8 0.813 1.5 8.732 31.9885 5.85 255.2 28 41.0 13.2600 58.9 0.838 1.4 8.731 31.9885 5.82 253.7 48 42.0 13.2548 58.5 0.777 1.2 8.729 31.9889 5.78 251.8 35 43.0 13.2167 59.3 0.655 1.1 8.729 31.9931 5.76 251.0 25 44.0 13.1929 59.5 0.682 1.0 8.728 31.9958 5.76 251.2 23 45.0 13.1531 59.8 0.558 0.9 8.725 32.0037 5.75 250.8 29 45.7 13.1400 60.2 0.488 0.8 8.724 32.0064 5.71 249.1 15 47.0 13.1078 60.4 0.510 0.7 8.719 32.0144 5.67 247.3 29 48.0 13.0408 60.7 0.382 0.7 8.716 32.0320 5.67 247.2 24 49.0 13.0375 60.8 0.412 0.6 8.715 32.0326 5.66 246.8 30 50.0 13.0331 60.7 0.396 0.5 8.714 32.0341 5.63 245.5 42 51.0 13.0288 60.6 0.375 0.5 8.711 32.0360 5.60 244.2 30 52.0 13.0055 60.6 0.366 0.5 8.710 32.0461 5.59 243.7 23 53.0 12.9672 60.6 0.337 0.4 8.709 32.0633 5.59 243.7 25 54.0 12.9466 60.2 0.340 0.4 8.707 32.0724 5.58 243.1 33 54.9 12.9351 60.4 0.382 0.3 8.706 32.0786 5.57 242.6 34 56.1 12.9025 60.1 0.404 0.3 8.702 32.0935 5.57 242.8 25 57.0 12.8936 59.4 0.350 0.3 8.702 32.0981 5.59 243.5 28 57.9 12.8838 59.5 0.367 0.3 8.702 32.1030 5.59 243.8 22