*2016/05/09 14:28:11.71 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2015/05/26 16:14:14.000 TIME INCREMENT : 0 0 0 0.125 0 ! (day hr min sec ms) NUMBER OF RECORDS : 45 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : F4A00E32 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 1.39375 44.542 2 Temperature:Primary 'deg C (ITS90)' 10.0163 12.34585 3 Fluorescence:URU:Wetlabs mg/m^3 0.3733636 12.92825 4 pH:SBE:Nominal n/a 7.46625 7.478417 5 Salinity:T0:C0 PSS-78 28.57643 29.6704 6 Oxygen:Dissolved:SBE mL/L 4.391833 6.79525 7 Number_of_bin_records n/a 1 23 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 7 F ' ' 2 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2015-39\Pro $END *ADMINISTRATION MISSION : 2015-39 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Zubkowski T. PLATFORM : Neocaligus *LOCATION GEOGRAPHIC AREA : Strait of Georgia STATION : Cowichan Bay EVENT NUMBER : 6 LATITUDE : 48 44.96000 N ! (deg min) LONGITUDE : 123 36.46000 W ! (deg min) WATER DEPTH : 54 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-25 SERIAL NUMBER : 0334 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2968 Conductivity ' ' 2173 'Pressure:Strain Gauge' ' ' 0464 pH ' ' 0852 'Oxygen:SBE 43' ' ' 0766 'Fluorometer:WET Labs ECO-AFL/FL' ' ' 2215 $END $REMARKS SOFTWARE VERSION 1.59 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.4.1 2016/05/09 12:18:02 2256 2256 CLEAN 5.2.1 2016/05/09 12:18:09 2256 2256 ADTIMCH 4.4 2016/05/09 12:18:15 2256 2256 MERGEHDR 1.3 2016/05/09 12:18:19 2256 2256 SHIFTDAT 3.4 2016/05/09 13:15:36 2256 2256 DELETE 6.3 2016/05/09 13:30:22 2256 591 CLIP 1.3 2016/05/09 13:31:22 591 560 CTDEDIT 5.0.4 2016/05/09 13:34:53 560 541 BINAVE 4.2 2016/05/09 14:17:22 541 45 REMOVECH 8.2 2016/05/09 14:28:06 45 45 HDREDIT2 3.0.2 2016/05/09 14:28:11 ? ? $END $REMARKS -CLEAN functions: 2016/05/09 12:18:09 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in All Channels Set event to last 4 characters of file name -The following ADTIMCH parameters were used. Add 7.00 hours to times in header file section -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= 0.70 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure NOT filtered. Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 5 points) will be deleted. Drop rate applies in the range 10.00 to 34.77 dbars Sample interval (from FILE section of header) = 0.125 seconds. -The following CLIP parameters were used. Clip by Channel Range Clip Channel: Press* Min,Max = 1.000, 500000.000 Time Not Available in File -CTDEDIT v5.0.4 2016/05/09 13:34:53 19 records were deleted in this editing session. 7 changes in channel Salinity:T0:C0 -The following BINAVE parameters were used: Bin channel = Press* Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2016/05/09 14:28:06 The following CHANNEL(S) were removed: Scan_Number Conductivity:Primary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Flag -HEADER EDITS: 2016/05/09 14:28:11 Applied edit header: P:\Cruise_Data_Processing\2015-39\Processing\doc\2015-39-HDR.TXT Channel 1: Pressure [decibar] Name: Pressure:StrainGauge ==> Pressure Format: F10.3 ==> F7.1 Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:URU:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a $END *COMMENTS SBE HEADER Sea-Bird SBE25 Data File: FileName = C:\Users\WP-SBE25\Desktop\CTD data\201505NEO000.hex Software Version 1.59 Temperature SN = 2968 Conductivity SN = 2173 System UpLoad Time = May 29 2015 17:24:24 ds SBE 25 CTD V 4.1a SN 334 05/29/15 10:24:37.668 external pressure sensor, range = 1500 psia, tcval = -264 xtal = 9437184 clk = 32767.693 vmain = 12.6 iop = 190 vlith = 5.4 ncasts = 6 samples = 15989 free = 628984 lwait = 0 msec CTD configuration: number of scans averaged = 1, data stored at 8 scans per second real time data transmitted at 1 scans per second minimum conductivity frequency for pump turn on = 3206 battery type = ALKALINE 3 external voltages sampled stored voltage # 0 = external voltage 0 stored voltage # 1 = external voltage 4 stored voltage # 2 = external voltage 5 S> dh cast 0 05/26 09:14:14 smpls 0 to 2255 nv = 3 avg = 1 stp = switch of S> # nquan = 11 # nvalues = 2256 # units = specified # name 0 = scan: Scan Count # name 1 = prSM: Pressure, Strain Gauge [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = c0S/m: Conductivity [S/m] # name 4 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 5 = sbeox0V: Oxygen raw, SBE 43 [V] # name 6 = ph: pH # name 7 = dz/dtM: Descent Rate [m/s] # name 8 = sal00: Salinity, Practical [PSU] # name 9 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 1 # name 10 = flag: flag # span 0 = 1, 2256 # span 1 = -0.818, 44.773 # span 2 = 10.0088, 15.5538 # span 3 = 0.001627, 3.419204 # span 4 = -0.2860, 17.6981 # span 5 = 0.0000, 3.5763 # span 6 = 7.455, 7.486 # span 7 = -0.830, 0.831 # span 8 = 0.0144, 29.6722 # span 9 = -20.0221, 26.6703 # span 10 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.125 # start_time = May 26 2015 09:14:14 [Instrument's time stamp, header] # bad_flag = -9.990e-29 # # # # # 2968 # 23-Dec-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.30553832e-003 # 6.40162727e-004 # 2.22082708e-005 # 2.03916376e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2173 # 19-Dec-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01661554e+001 # 1.39375700e+000 # -2.62058790e-003 # 2.51825196e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0464 # 23-Dec-14 # 7.968650e+002 # -2.072920e-001 # 2.663071e-007 # 0.00000 # # # # # # 0852 # 31-Dec-14 # 4.6456 # 2.5260 # # # # # # 0766 # 23-Dec-14 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.3003e-001 # -0.5141 # -4.0107e-003 # 2.1232e-004 # -3.2398e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.3000 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2215 # May 2015 # 1.30000000e+001 # # 0.0220 # # # # datcnv_date = May 09 2016 08:48:12, 7.23.2 [datcnv_vars = 8] # datcnv_in = P:\Cruise_Data_Processing\2015-39\RAW\CTD\2015-39-006.hex P:\Cruis e_Data_Processing\2015-39\Processing\doc\2015-39-ctd.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wfilter_date = May 09 2016 09:28:26, 7.23.2 # wfilter_in = P:\Cruise_Data_Processing\2015-39\Processing\convert\2015-39-006. cnv # wfilter_excl_bad_scans = yes # wfilter_action prSM = cosine, 5 # wfilter_action t090C = cosine, 5 # wfilter_action c0S/m = cosine, 5 # alignctd_date = May 09 2016 12:15:26, 7.23.2 # alignctd_in = P:\Cruise_Data_Processing\2015-39\Processing\filter\2015-39-0006 .cnv # alignctd_adv = sbeox0V 2.500 # celltm_date = May 09 2016 12:15:34, 7.23.2 # celltm_in = P:\Cruise_Data_Processing\2015-39\Processing\align\2015-39-0006.cn v # celltm_alpha = 0.0400, 0.0000 # celltm_tau = 8.0000, 0.0000 # celltm_temp_sensor_use_for_cond = primary, # Derive_date = May 09 2016 12:15:42, 7.23.2 [derive_vars = 2] # Derive_in = P:\Cruise_Data_Processing\2015-39\Processing\celltm\2015-39-0006.c nv P:\Cruise_Data_Processing\2015-39\Processing\doc\2015-39-ctd.xmlcon # derive_time_window_docdt = seconds: 1 # derive_ox_tau_correction = yes # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove a few records from the top and bottom of the cast; salinity was cleaned very lightly. ---------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Fluorescence data are nominal and unedited, except that some records were removed in editing temperature and salinity. There was no salinity or dissolved oxygen calibration sampling and no other information available on which to base a recalibration. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Some data were removed in editing temperature and salinity and where the pH sensor had clearly malfunctioned, but the data are otherwise unedited. Calibration is required for each cast to get absolute pH values, although general trends within a cast are likely real. For details on the processing see processing report: 2015-39-proc.doc. ---------------------------------------------------------------------------------- !--1--- ---2---- ---3--- ---4--- ---5---- --6--- -7-- !Pressu Temperat Fluores pH:SBE: Salinity Oxygen Numb !re ure: cence: Nominal :T0:C0 : er_o ! Primary URU: Dissol ~bin ! Wetlabs ved: _rec ! SBE ords !------ -------- ------- ------- -------- ------ ---- *END OF HEADER 1.4 12.3458 12.928 7.466 28.5764 6.79 4 2.0 12.2831 9.671 7.467 28.5828 6.72 23 3.0 12.2737 7.763 7.469 28.5909 6.72 19 4.0 12.2500 7.537 7.467 28.6231 6.76 14 5.0 12.2353 9.120 7.467 28.6400 6.74 16 6.0 12.2301 7.643 7.468 28.6430 6.72 12 7.0 12.2302 8.465 7.468 28.6446 6.71 12 8.0 12.2236 9.517 7.468 28.6471 6.68 13 9.0 12.1397 8.314 7.469 28.6691 6.44 13 10.0 11.8682 7.394 7.469 28.7683 6.17 13 11.0 11.6807 6.062 7.470 28.9036 6.08 12 12.0 11.5410 7.780 7.470 28.9837 5.98 13 13.0 11.4944 7.963 7.470 28.9995 5.86 12 14.0 11.3930 6.498 7.470 29.0184 5.69 12 15.0 11.3486 4.602 7.471 29.0270 5.58 13 16.0 11.2611 4.423 7.471 29.0569 5.52 12 17.0 11.1841 3.481 7.471 29.0982 5.43 13 18.0 11.1101 2.752 7.472 29.1290 5.35 14 19.0 11.0737 2.559 7.472 29.1393 5.33 12 20.0 11.0644 3.225 7.472 29.1448 5.30 12 21.0 11.0517 2.512 7.472 29.1540 5.27 12 22.0 11.0023 2.198 7.472 29.1710 5.20 13 23.0 10.9832 2.103 7.472 29.1758 5.16 13 24.0 10.9530 2.235 7.473 29.1878 5.13 12 25.0 10.9065 1.791 7.472 29.2089 5.08 12 26.0 10.8064 1.481 7.472 29.2267 5.01 11 27.0 10.7506 1.597 7.472 29.2363 4.97 11 28.0 10.7189 1.457 7.472 29.2729 4.92 11 29.0 10.6822 1.144 7.474 29.2988 4.87 11 30.0 10.6305 1.051 7.474 29.3214 4.84 12 31.0 10.5736 0.991 7.474 29.3378 4.81 11 32.0 10.5251 0.883 7.475 29.3578 4.78 11 33.0 10.4520 0.698 7.476 29.3737 4.75 11 34.0 10.4105 0.667 7.475 29.3793 4.74 11 35.0 10.3631 0.590 7.476 29.3848 4.74 12 36.0 10.3246 0.548 7.477 29.3908 4.72 11 37.0 10.2801 0.642 7.476 29.4024 4.69 11 38.0 10.2088 0.590 7.478 29.4294 4.64 12 39.0 10.2781 0.473 7.477 29.5057 4.63 11 40.0 10.2823 0.554 7.477 29.5876 4.55 11 41.0 10.0889 0.716 7.478 29.5992 4.46 12 42.0 10.0178 0.440 7.477 29.6130 4.43 11 43.0 10.0236 0.373 7.478 29.6387 4.40 11 44.0 10.0293 0.428 7.478 29.6618 4.39 12 44.5 10.0163 0.381 7.478 29.6704 4.39 1