*2016/04/20 12:06:04.02 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2015/07/19 17:25:46.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 147 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 6D04DB46 NUMBER OF CHANNELS : 6 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 4.22625 150.0264 2 Temperature:Primary 'deg C (ITS90)' 10.59423 11.16722 3 Fluorescence:URU:Seapoint mg/m^3 0.157 0.4327111 4 pH:SBE:Nominal n/a 7.739 7.830464 5 Salinity:T0:C0 PSS-78 30.2228 30.72932 6 Number_of_bin_records n/a 12 64 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2015-15\Pro $END *ADMINISTRATION MISSION : 2015-15 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Thiess M. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Juan de Fuca Strait / WCVI / Johnstone Strait STATION : JS 03 EVENT NUMBER : 366 LATITUDE : 50 21.96000 N ! (deg min) LONGITUDE : 125 44.11000 W ! (deg min) WATER DEPTH : 194 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------- -------------- ---------- Temperature ' ' 4752 Conductivity ' ' 3396 'Pressure:Digiquartz with TC' ' ' 0585 Temperature:2 ' ' 2449 Conductivity:2 ' ' 2399 'Oxygen:SBE 43' ' ' 1119 Fluorometer:Seapoint ' ' 3685 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.4.1 2016/04/12 14:21:18 10343 10343 CLEAN 5.2.1 2016/04/12 14:22:48 10343 10343 SHIFTDAT 3.4 2016/04/12 16:47:38 10343 10343 SHIFTDAT 3.4 2016/04/12 17:35:04 10343 10343 SHIFTDAT 3.4 2016/04/13 10:24:41 10343 10343 DELETE 6.3 2016/04/13 10:29:31 10343 4869 CTDEDIT 5.0.4 2016/04/19 10:07:09 4869 4621 CALIB 11.8.1 2016/04/20 11:34:47 4621 4621 FILTERS 4.3 2016/04/20 11:35:39 4621 4621 BINAVE 4.2 2016/04/20 11:48:40 4621 147 REMOVECH 8.2 2016/04/20 11:48:43 147 147 HDREDIT2 3.0.2 2016/04/20 12:06:04 ? ? $END $REMARKS -CLEAN functions: 2016/04/12 14:21:26 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 50.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.70 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 140.78 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2016/04/19 10:07:09 248 records were deleted in this editing session. 11 changes in channel Salinity:T0:C0 -CALIB parameters: 2016/04/20 11:34:47 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 12 Salinity:T0:C0 PSS-78 10 -0.2000000E-02 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2016/04/20 11:48:43 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -HEADER EDITS: 2016/04/20 12:06:04 Applied edit header: P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\CTD Data\2015-15\2015-15-0366.hex Software Version Seasave V 7.21d Temperature SN = 4752 Conductivity SN = 3396 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 19 2015 10:29:00 NMEA Latitude = 50 21.96 N NMEA Longitude = 125 44.11 W NMEA UTC (Time) = Jul 19 2015 17:25:46 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ship: W.E. Ricker 2015-15 Station: JS 03 Operator: HM Depth: 194 m System UTC = Jul 19 2015 17:29:00 # nquan = 14 # nvalues = 10343 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flSP: Fluorescence, Seapoint # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = flag: flag # span 0 = 1, 10343 # span 1 = 3.197, 150.780 # span 2 = 10.5890, 11.1817 # span 3 = 10.5900, 11.1876 # span 4 = 3.427106, 3.445109 # span 5 = 3.473171, 3.490849 # span 6 = 4.8840e-02, 6.8376e-01 # span 7 = 0.0000, 0.0000 # span 8 = 7.604, 7.844 # span 9 = -1.154, 1.028 # span 10 = 0, 1 # span 11 = 30.2027, 30.7370 # span 12 = 30.6468, 31.1895 # span 13 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 19 2015 17:25:46 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 4752 # 23-Jan-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35902423e-003 # 6.36413981e-004 # 2.06309769e-005 # 1.71365270e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3396 # 19-Dec-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -9.91941065e+000 # 1.31439274e+000 # 3.00845560e-005 # 6.13621985e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0585 # 30-Dec-13 # -3.951550e+004 # -4.415130e-001 # 1.282560e-002 # 3.560600e-002 # 0.000000e+000 # 3.030045e+001 # -4.415690e-004 # 4.342710e-006 # 1.736800e-009 # 0.99994600 # -2.11246 # 0.000000e+000 # 1.288270e-002 # -8.164490e+000 # # # # # # 2449 # 06-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35517974e-003 # 6.43485967e-004 # 2.33381062e-005 # 2.21338578e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2399 # 17-Jan-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.08277491e+001 # 1.61475240e+000 # 1.24520243e-003 # 1.93505039e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1119 # 21-Jan-14 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.4901e-001 # -0.5263 # -1.9196e-003 # 8.5361e-005 # -1.2856e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.0400 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

#
#
#
# # # # # # # 3685 # # # 2 # 0.000 # # # # # # # # # 0851 # Sept 4th 2014 # 4.6134 # 2.5497 # # # # # #
# datcnv_date = Aug 06 2015 12:16:14, 7.23.2 [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2015-15\RAW\CTD\2015-15-0366.hex P:\Crui se_Data_Processing\2015-15\Processing\doc\2015-15-ctd.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Nov 16 2015 17:18:30, 7.23.2 # wildedit_in = P:\Cruise_Data_Processing\2015-15\Processing\convert\2015-15-036 6.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # celltm_date = Nov 16 2015 17:21:45, 7.23.2 # celltm_in = P:\Cruise_Data_Processing\2015-15\Processing\wildedit\2015-15-0366 .cnv # celltm_alpha = 0.0245, 0.0245 # celltm_tau = 9.5000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Nov 16 2015 17:28:10, 7.23.2 [derive_vars = 2] # Derive_in = P:\Cruise_Data_Processing\2015-15\Processing\celltm\2015-15-0366.c nv P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-ctd.XMLCON # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some records corrupted by shed wakes; salinity was cleaned lightly. ---------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Fluorescence and pH data are nominal and unedited except that some records were removed in editing temperature and salinity. Recalibration of channel Salinity:T0:C0 was based on a post-cruise calibration and a comparison with bottle samples. Stops for bottles were often very short and there was a cruise between this one and the post-cruise calibration, but the salinity is likely good to +/- 0.002. A dissolved oxygen sensor was mounted but no data were acquired. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were collected. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see the report: 2015-15_Processing_Report.doc. ---------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (-0.2E-02 1) $END !--1--- ---2---- ---3--- ---4--- ---5---- -6-- !Pressu Temperat Fluores pH:SBE: Salinity Numb !re ure: cence: Nominal :T0:C0 er_o ! Primary URU: ~bin ! Seapoin _rec ! t ords !------ -------- ------- ------- -------- ---- *END OF HEADER 4.2 11.1588 0.157 7.739 30.2244 35 5.2 11.1599 0.169 7.748 30.2241 12 6.0 11.1646 0.203 7.754 30.2231 39 7.0 11.1657 0.214 7.764 30.2228 39 8.0 11.1672 0.207 7.770 30.2230 37 9.0 11.1552 0.256 7.779 30.2236 49 10.0 11.1501 0.350 7.785 30.2244 31 11.0 11.1452 0.378 7.787 30.2256 33 11.9 11.1107 0.361 7.790 30.2346 29 13.0 11.1071 0.355 7.792 30.2354 28 14.0 11.1062 0.389 7.795 30.2357 26 15.0 11.1196 0.351 7.797 30.2319 28 16.0 11.1263 0.360 7.798 30.2299 24 17.0 11.1212 0.377 7.799 30.2314 24 18.0 11.1223 0.349 7.799 30.2297 25 19.0 11.1256 0.349 7.799 30.2287 26 20.0 11.1223 0.368 7.801 30.2309 26 21.0 11.0959 0.368 7.802 30.2411 26 22.0 11.0407 0.359 7.802 30.2635 26 23.0 11.0209 0.353 7.802 30.2724 26 24.0 11.0200 0.374 7.803 30.2732 25 25.0 11.0146 0.373 7.804 30.2743 25 26.0 10.9930 0.391 7.806 30.2815 27 27.0 10.9935 0.386 7.807 30.2818 25 28.0 10.9772 0.372 7.807 30.2914 26 29.0 10.9507 0.376 7.807 30.3164 27 30.0 10.9485 0.375 7.807 30.3189 26 31.0 10.9348 0.408 7.808 30.3349 25 32.0 10.9239 0.380 7.809 30.3468 26 33.0 10.9214 0.401 7.810 30.3500 26 34.0 10.9205 0.404 7.811 30.3511 25 35.0 10.9193 0.385 7.811 30.3525 26 36.0 10.9181 0.383 7.811 30.3542 26 37.0 10.9175 0.392 7.811 30.3550 26 38.0 10.9177 0.363 7.812 30.3552 26 39.0 10.9182 0.391 7.812 30.3542 27 40.0 10.9184 0.394 7.814 30.3542 26 41.0 10.9183 0.394 7.815 30.3544 26 42.0 10.9170 0.377 7.815 30.3566 27 43.0 10.9160 0.375 7.816 30.3582 25 44.0 10.9163 0.379 7.816 30.3578 26 45.0 10.9152 0.372 7.816 30.3595 26 46.0 10.9145 0.369 7.816 30.3604 25 47.0 10.9144 0.386 7.816 30.3610 26 48.0 10.9146 0.390 7.816 30.3609 26 49.0 10.9143 0.373 7.817 30.3613 26 50.0 10.9147 0.361 7.817 30.3611 26 51.0 10.9151 0.363 7.817 30.3606 27 52.0 10.9148 0.366 7.818 30.3612 25 53.0 10.9155 0.367 7.820 30.3602 26 54.0 10.9161 0.371 7.821 30.3594 25 55.0 10.9163 0.373 7.821 30.3591 26 56.0 10.9166 0.407 7.821 30.3588 26 57.0 10.9173 0.394 7.821 30.3583 26 58.0 10.9167 0.354 7.821 30.3591 26 59.0 10.9167 0.344 7.821 30.3592 26 60.0 10.9166 0.384 7.821 30.3595 26 61.0 10.9140 0.371 7.821 30.3630 27 62.0 10.9116 0.386 7.821 30.3662 26 63.0 10.9112 0.412 7.821 30.3670 26 64.0 10.9105 0.393 7.821 30.3679 27 65.0 10.9101 0.399 7.821 30.3687 28 66.0 10.9098 0.407 7.821 30.3692 27 67.0 10.9093 0.404 7.821 30.3699 26 68.0 10.9091 0.398 7.822 30.3703 28 69.0 10.9087 0.397 7.821 30.3712 27 70.0 10.9083 0.375 7.823 30.3718 27 71.0 10.9076 0.398 7.822 30.3728 27 72.0 10.9060 0.394 7.823 30.3751 28 73.0 10.9034 0.363 7.823 30.3786 26 74.0 10.9001 0.361 7.825 30.3829 27 75.0 10.8992 0.360 7.825 30.3840 28 76.0 10.8961 0.354 7.825 30.3882 27 77.0 10.8958 0.428 7.825 30.3887 27 78.0 10.8965 0.401 7.826 30.3879 27 79.0 10.8931 0.378 7.826 30.3922 28 80.0 10.8894 0.375 7.826 30.3967 32 81.0 10.8933 0.384 7.825 30.3922 56 82.0 10.8909 0.386 7.826 30.3953 62 83.0 10.8656 0.397 7.826 30.4247 64 84.0 10.8581 0.390 7.826 30.4333 63 85.0 10.8532 0.371 7.826 30.4391 61 86.0 10.8532 0.382 7.826 30.4391 55 87.0 10.8555 0.381 7.826 30.4367 45 88.0 10.8560 0.433 7.826 30.4362 45 89.0 10.8595 0.376 7.826 30.4326 46 90.0 10.8518 0.376 7.826 30.4416 44 91.0 10.8500 0.380 7.826 30.4436 45 92.0 10.8503 0.378 7.826 30.4434 42 93.0 10.8451 0.370 7.826 30.4495 40 94.0 10.8443 0.374 7.826 30.4505 35 95.0 10.8368 0.389 7.826 30.4592 34 96.0 10.8131 0.409 7.826 30.4858 31 97.0 10.7965 0.365 7.826 30.5048 34 98.0 10.8032 0.371 7.826 30.4970 34 99.0 10.8035 0.390 7.826 30.4969 34 100.0 10.8270 0.390 7.826 30.4706 34 101.0 10.8326 0.356 7.826 30.4645 32 102.0 10.8239 0.368 7.826 30.4744 33 103.0 10.8244 0.414 7.826 30.4741 34 104.0 10.8212 0.364 7.826 30.4778 33 105.0 10.8220 0.375 7.826 30.4771 34 106.0 10.8253 0.390 7.826 30.4733 33 107.0 10.8278 0.379 7.826 30.4707 34 108.0 10.8203 0.395 7.826 30.4795 33 109.0 10.8232 0.358 7.826 30.4762 30 110.0 10.8225 0.353 7.826 30.4775 27 111.0 10.8201 0.356 7.826 30.4804 26 112.0 10.8151 0.365 7.827 30.4863 27 113.0 10.8130 0.360 7.826 30.4888 27 114.0 10.8094 0.359 7.826 30.4929 25 115.0 10.8097 0.402 7.828 30.4930 26 116.0 10.8085 0.360 7.827 30.4945 29 117.0 10.8024 0.386 7.827 30.5013 28 118.0 10.8047 0.370 7.827 30.4987 27 119.0 10.8054 0.359 7.828 30.4982 26 120.0 10.8056 0.374 7.827 30.4980 27 121.0 10.7954 0.361 7.827 30.5098 27 122.0 10.7952 0.377 7.828 30.5097 27 123.0 10.8014 0.361 7.828 30.5028 28 124.0 10.7929 0.368 7.829 30.5128 27 125.0 10.7859 0.358 7.829 30.5205 22 126.0 10.7836 0.363 7.829 30.5235 28 127.0 10.7826 0.370 7.829 30.5247 27 128.0 10.7819 0.361 7.830 30.5255 28 129.0 10.7812 0.378 7.830 30.5263 27 130.0 10.7803 0.377 7.829 30.5275 27 131.0 10.7796 0.377 7.830 30.5283 27 132.0 10.7798 0.378 7.830 30.5282 25 133.0 10.7810 0.364 7.829 30.5271 27 134.0 10.7789 0.367 7.829 30.5291 25 135.0 10.7765 0.366 7.829 30.5320 26 136.0 10.7706 0.384 7.829 30.5386 28 137.0 10.7691 0.361 7.829 30.5404 28 138.0 10.7689 0.370 7.829 30.5408 27 139.0 10.7616 0.358 7.829 30.5485 28 140.0 10.7525 0.350 7.828 30.5588 28 141.0 10.7138 0.357 7.828 30.6006 27 142.0 10.7189 0.338 7.828 30.5948 28 143.0 10.6619 0.353 7.828 30.6562 40 144.0 10.6484 0.379 7.829 30.6702 47 145.0 10.6392 0.388 7.830 30.6802 54 146.0 10.6308 0.355 7.830 30.6896 53 147.0 10.6140 0.347 7.830 30.7076 49 148.0 10.6132 0.363 7.830 30.7087 56 149.0 10.6051 0.372 7.830 30.7176 57 150.0 10.5942 0.381 7.830 30.7293 60