*2016/04/20 12:06:03.86 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2015/07/18 20:01:33.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 76 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : C72D664F NUMBER OF CHANNELS : 6 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 3.384 77.5886 2 Temperature:Primary 'deg C (ITS90)' 8.73456 11.86545 3 Fluorescence:URU:Seapoint mg/m^3 0.1366 9.103526 4 pH:SBE:Nominal n/a 7.827 8.1592 5 Salinity:T0:C0 PSS-78 30.9769 32.57702 6 Number_of_bin_records n/a 2 38 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2015-15\Pro $END *ADMINISTRATION MISSION : 2015-15 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Thiess M. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Juan de Fuca Strait / WCVI / Johnstone Strait STATION : QCST 05 EVENT NUMBER : 356 LATITUDE : 50 41.04000 N ! (deg min) LONGITUDE : 127 12.83000 W ! (deg min) WATER DEPTH : 85 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------- -------------- ---------- Temperature ' ' 4752 Conductivity ' ' 3396 'Pressure:Digiquartz with TC' ' ' 0585 Temperature:2 ' ' 2449 Conductivity:2 ' ' 2399 'Oxygen:SBE 43' ' ' 1119 Fluorometer:Seapoint ' ' 3685 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.4.1 2016/04/12 14:21:13 5124 5124 CLEAN 5.2.1 2016/04/12 14:22:42 5124 5124 SHIFTDAT 3.4 2016/04/12 16:47:33 5124 5124 SHIFTDAT 3.4 2016/04/12 17:34:59 5124 5124 SHIFTDAT 3.4 2016/04/13 10:24:36 5124 5124 DELETE 6.3 2016/04/13 10:29:26 5124 1895 CTDEDIT 5.0.4 2016/04/19 08:44:58 1895 1856 CALIB 11.8.1 2016/04/20 11:34:44 1856 1856 FILTERS 4.3 2016/04/20 11:35:37 1856 1856 BINAVE 4.2 2016/04/20 11:48:39 1856 76 REMOVECH 8.2 2016/04/20 11:48:43 76 76 HDREDIT2 3.0.2 2016/04/20 12:06:03 ? ? $END $REMARKS -CLEAN functions: 2016/04/12 14:21:26 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 50.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.70 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 67.92 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2016/04/19 08:44:58 39 records were deleted in this editing session. 44 changes in channel Salinity:T0:C0 -CALIB parameters: 2016/04/20 11:34:44 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 12 Salinity:T0:C0 PSS-78 10 -0.2000000E-02 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2016/04/20 11:48:43 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -HEADER EDITS: 2016/04/20 12:06:03 Applied edit header: P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\CTD Data\2015-15\2015-15-0356.hex Software Version Seasave V 7.21d Temperature SN = 4752 Conductivity SN = 3396 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 18 2015 13:04:40 NMEA Latitude = 50 41.04 N NMEA Longitude = 127 12.83 W NMEA UTC (Time) = Jul 18 2015 20:01:33 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ship: W.E. Ricker 2015-15 Station: QCST 05 Operator: HM Depth: 85 m System UTC = Jul 18 2015 20:04:40 # nquan = 14 # nvalues = 5124 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flSP: Fluorescence, Seapoint # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = flag: flag # span 0 = 1, 5124 # span 1 = 0.488, 77.916 # span 2 = 8.7179, 12.0832 # span 3 = 8.7186, 12.0323 # span 4 = 3.462046, 3.591847 # span 5 = 3.498639, 3.626993 # span 6 = 0.0000e+00, 1.0720e+01 # span 7 = 0.0000, 0.0000 # span 8 = 7.817, 8.174 # span 9 = -1.168, 1.194 # span 10 = 0, 1 # span 11 = 30.8090, 32.5875 # span 12 = 31.1754, 32.9702 # span 13 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 18 2015 20:01:33 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 4752 # 23-Jan-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35902423e-003 # 6.36413981e-004 # 2.06309769e-005 # 1.71365270e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3396 # 19-Dec-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -9.91941065e+000 # 1.31439274e+000 # 3.00845560e-005 # 6.13621985e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0585 # 30-Dec-13 # -3.951550e+004 # -4.415130e-001 # 1.282560e-002 # 3.560600e-002 # 0.000000e+000 # 3.030045e+001 # -4.415690e-004 # 4.342710e-006 # 1.736800e-009 # 0.99994600 # -2.11246 # 0.000000e+000 # 1.288270e-002 # -8.164490e+000 # # # # # # 2449 # 06-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35517974e-003 # 6.43485967e-004 # 2.33381062e-005 # 2.21338578e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2399 # 17-Jan-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.08277491e+001 # 1.61475240e+000 # 1.24520243e-003 # 1.93505039e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1119 # 21-Jan-14 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.4901e-001 # -0.5263 # -1.9196e-003 # 8.5361e-005 # -1.2856e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.0400 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # # # # 3685 # # # 2 # 0.000 # # # # # # # # # 0851 # Sept 4th 2014 # 4.6134 # 2.5497 # # # # # # # datcnv_date = Aug 06 2015 12:16:11, 7.23.2 [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2015-15\RAW\CTD\2015-15-0356.hex P:\Crui se_Data_Processing\2015-15\Processing\doc\2015-15-ctd.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Nov 16 2015 17:18:29, 7.23.2 # wildedit_in = P:\Cruise_Data_Processing\2015-15\Processing\convert\2015-15-035 6.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # celltm_date = Nov 16 2015 17:21:44, 7.23.2 # celltm_in = P:\Cruise_Data_Processing\2015-15\Processing\wildedit\2015-15-0356 .cnv # celltm_alpha = 0.0245, 0.0245 # celltm_tau = 9.5000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Nov 16 2015 17:28:08, 7.23.2 [derive_vars = 2] # Derive_in = P:\Cruise_Data_Processing\2015-15\Processing\celltm\2015-15-0356.c nv P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-ctd.XMLCON # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some records corrupted by shed wakes; salinity was cleaned. ---------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Fluorescence and pH data are nominal and unedited except that some records were removed in editing temperature and salinity. Recalibration of channel Salinity:T0:C0 was based on a post-cruise calibration and a comparison with bottle samples. Stops for bottles were often very short and there was a cruise between this one and the post-cruise calibration, but the salinity is likely good to +/- 0.002. A dissolved oxygen sensor was mounted but no data were acquired. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were collected. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see the report: 2015-15_Processing_Report.doc. ---------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (-0.2E-02 1) $END !--1--- ---2---- ---3--- ---4--- ---5---- -6-- !Pressu Temperat Fluores pH:SBE: Salinity Numb !re ure: cence: Nominal :T0:C0 er_o ! Primary URU: ~bin ! Seapoin _rec ! t ords !------ -------- ------- ------- -------- ---- *END OF HEADER 3.4 11.8654 4.842 8.156 30.9769 2 4.0 11.6793 6.919 8.159 30.9793 24 4.9 11.4130 9.104 8.154 30.9956 38 6.0 11.4573 7.817 8.144 31.0217 26 7.0 11.3791 7.596 8.135 31.0374 24 8.0 11.2708 8.471 8.127 31.0319 24 9.0 11.1900 8.860 8.113 31.0350 25 10.0 11.1087 7.142 8.097 31.0462 25 11.0 11.0147 6.449 8.081 31.0715 24 12.0 10.9736 5.903 8.069 31.0838 24 13.0 10.9578 5.118 8.060 31.0881 23 14.0 10.8876 4.871 8.052 31.1138 23 15.0 10.8989 4.816 8.047 31.1904 25 16.0 10.9438 4.514 8.047 31.2134 26 17.0 10.9599 4.530 8.049 31.2200 26 18.0 10.9792 4.566 8.051 31.2323 25 19.0 10.9971 4.599 8.051 31.2974 25 20.0 10.7964 3.577 8.044 31.5611 24 21.0 10.6958 3.682 8.035 31.6139 25 22.0 10.6598 2.675 8.028 31.6243 27 23.0 10.5942 2.427 8.021 31.6533 26 24.0 10.4986 1.911 8.014 31.7269 25 25.0 10.4523 1.547 8.008 31.7723 26 26.0 10.4007 1.471 8.003 31.8316 27 27.0 10.3439 1.388 7.997 31.8685 25 28.0 10.2328 1.079 7.989 31.9221 22 29.0 10.1012 0.785 7.980 31.9835 23 30.0 10.0833 0.660 7.971 31.9972 19 31.0 10.0177 0.539 7.965 32.0245 23 32.0 10.0060 0.453 7.961 32.0313 25 33.0 10.0025 0.463 7.958 32.0355 27 34.0 9.9818 0.483 7.955 32.0374 29 35.0 9.9637 0.461 7.951 32.0376 25 36.0 9.8995 0.489 7.947 32.0650 21 37.0 9.8398 0.374 7.942 32.0928 21 38.0 9.8096 0.370 7.939 32.1115 22 39.0 9.7798 0.360 7.936 32.1240 26 40.0 9.7247 0.298 7.932 32.1522 29 41.0 9.6892 0.265 7.927 32.1664 28 42.0 9.6571 0.277 7.924 32.1828 25 43.0 9.6232 0.362 7.920 32.1989 23 44.0 9.5988 0.296 7.917 32.2100 23 45.0 9.5772 0.277 7.914 32.2187 21 46.0 9.5669 0.283 7.913 32.2233 24 47.0 9.5532 0.274 7.910 32.2297 25 48.0 9.5389 0.276 7.909 32.2363 26 49.0 9.5255 0.268 7.906 32.2425 28 50.0 9.5203 0.221 7.905 32.2444 22 51.0 9.5181 0.207 7.905 32.2458 22 52.0 9.5176 0.208 7.903 32.2464 22 53.0 9.5083 0.248 7.901 32.2521 20 54.0 9.4964 0.240 7.901 32.2576 26 55.0 9.4514 0.247 7.897 32.2777 27 56.0 9.3684 0.226 7.892 32.3141 26 57.0 9.3625 0.199 7.891 32.3158 23 58.0 9.3417 0.199 7.887 32.3243 24 59.0 9.3206 0.180 7.886 32.3331 25 60.0 9.3161 0.171 7.883 32.3347 24 61.0 9.3095 0.182 7.882 32.3373 24 62.0 9.3095 0.172 7.880 32.3361 24 63.0 9.2936 0.168 7.879 32.3412 27 64.0 9.2990 0.175 7.878 32.3380 26 65.0 9.2821 0.186 7.878 32.3407 23 66.0 9.2722 0.178 7.876 32.3446 24 67.0 9.2603 0.179 7.874 32.3485 25 68.0 9.2388 0.156 7.873 32.3581 26 69.0 9.2135 0.198 7.869 32.3681 24 70.0 9.1989 0.169 7.869 32.3755 24 71.0 9.1166 0.158 7.863 32.4137 25 72.0 8.9354 0.166 7.854 32.4933 27 73.0 8.8717 0.160 7.848 32.5193 27 74.0 8.8274 0.151 7.841 32.5368 26 75.0 8.7944 0.141 7.836 32.5500 24 76.0 8.7876 0.143 7.832 32.5535 22 77.0 8.7631 0.147 7.829 32.5642 21 77.6 8.7346 0.137 7.827 32.5770 5