*2016/04/20 12:06:03.63 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2015/07/18 01:24:33.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 72 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 92588002 NUMBER OF CHANNELS : 6 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 4.043091 75.01736 2 Temperature:Primary 'deg C (ITS90)' 8.495217 14.08198 3 Fluorescence:URU:Seapoint mg/m^3 0.1041935 2.651059 4 pH:SBE:Nominal n/a 7.820805 8.267 5 Salinity:T0:C0 PSS-78 30.83826 32.68284 6 Number_of_bin_records n/a 11 48 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2015-15\Pro $END *ADMINISTRATION MISSION : 2015-15 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Thiess M. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Juan de Fuca Strait / WCVI / Johnstone Strait STATION : T 01 EVENT NUMBER : 341 LATITUDE : 51 13.38000 N ! (deg min) LONGITUDE : 128 17.32000 W ! (deg min) WATER DEPTH : 85 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------- -------------- ---------- Temperature ' ' 4752 Conductivity ' ' 3396 'Pressure:Digiquartz with TC' ' ' 0585 Temperature:2 ' ' 2449 Conductivity:2 ' ' 2399 'Oxygen:SBE 43' ' ' 1119 Fluorometer:Seapoint ' ' 3685 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.4.1 2016/04/12 14:21:04 5420 5420 CLEAN 5.2.1 2016/04/12 14:22:33 5420 5420 SHIFTDAT 3.4 2016/04/12 16:47:25 5420 5420 SHIFTDAT 3.4 2016/04/12 17:34:51 5420 5420 SHIFTDAT 3.4 2016/04/13 10:24:28 5420 5420 DELETE 6.3 2016/04/13 10:29:20 5420 1986 CTDEDIT 5.0.4 2016/04/19 08:08:45 1986 1866 CALIB 11.8.1 2016/04/20 11:34:40 1866 1866 FILTERS 4.3 2016/04/20 11:35:33 1866 1866 BINAVE 4.2 2016/04/20 11:48:36 1866 72 REMOVECH 8.2 2016/04/20 11:48:43 72 72 HDREDIT2 3.0.2 2016/04/20 12:06:03 ? ? $END $REMARKS -CLEAN functions: 2016/04/12 14:21:26 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 50.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.70 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 65.64 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2016/04/19 08:08:45 120 records were deleted in this editing session. 41 changes in channel Salinity:T0:C0 -CALIB parameters: 2016/04/20 11:34:40 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 12 Salinity:T0:C0 PSS-78 10 -0.2000000E-02 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2016/04/20 11:48:43 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -HEADER EDITS: 2016/04/20 12:06:03 Applied edit header: P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\CTD Data\2015-15\2015-15-0341.hex Software Version Seasave V 7.21d Temperature SN = 4752 Conductivity SN = 3396 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 17 2015 18:27:35 NMEA Latitude = 51 13.38 N NMEA Longitude = 128 17.32 W NMEA UTC (Time) = Jul 18 2015 01:24:33 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ship: W.E. Ricker 2015-15 Station: T 01 Operator: HM Depth: 85 m System UTC = Jul 18 2015 01:27:35 # nquan = 14 # nvalues = 5420 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flSP: Fluorescence, Seapoint # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = flag: flag # span 0 = 1, 5420 # span 1 = 2.851, 75.643 # span 2 = 8.4673, 14.1006 # span 3 = 8.4719, 14.1016 # span 4 = 3.450652, 3.754528 # span 5 = 3.487173, 3.795935 # span 6 = 7.3260e-02, 3.6264e+00 # span 7 = 0.0000, 0.0000 # span 8 = 7.809, 8.267 # span 9 = -1.651, 1.618 # span 10 = 0, 1 # span 11 = 30.8354, 32.7000 # span 12 = 31.2059, 33.0800 # span 13 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 18 2015 01:24:33 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 4752 # 23-Jan-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35902423e-003 # 6.36413981e-004 # 2.06309769e-005 # 1.71365270e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3396 # 19-Dec-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -9.91941065e+000 # 1.31439274e+000 # 3.00845560e-005 # 6.13621985e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0585 # 30-Dec-13 # -3.951550e+004 # -4.415130e-001 # 1.282560e-002 # 3.560600e-002 # 0.000000e+000 # 3.030045e+001 # -4.415690e-004 # 4.342710e-006 # 1.736800e-009 # 0.99994600 # -2.11246 # 0.000000e+000 # 1.288270e-002 # -8.164490e+000 # # # # # # 2449 # 06-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35517974e-003 # 6.43485967e-004 # 2.33381062e-005 # 2.21338578e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2399 # 17-Jan-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.08277491e+001 # 1.61475240e+000 # 1.24520243e-003 # 1.93505039e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1119 # 21-Jan-14 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.4901e-001 # -0.5263 # -1.9196e-003 # 8.5361e-005 # -1.2856e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.0400 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

#
#
#
# # # # # # # 3685 # # # 2 # 0.000 # # # # # # # # # 0851 # Sept 4th 2014 # 4.6134 # 2.5497 # # # # # #
# datcnv_date = Aug 06 2015 12:16:06, 7.23.2 [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2015-15\RAW\CTD\2015-15-0341.hex P:\Crui se_Data_Processing\2015-15\Processing\doc\2015-15-ctd.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Nov 16 2015 17:18:27, 7.23.2 # wildedit_in = P:\Cruise_Data_Processing\2015-15\Processing\convert\2015-15-034 1.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # celltm_date = Nov 16 2015 17:21:41, 7.23.2 # celltm_in = P:\Cruise_Data_Processing\2015-15\Processing\wildedit\2015-15-0341 .cnv # celltm_alpha = 0.0245, 0.0245 # celltm_tau = 9.5000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Nov 16 2015 17:28:05, 7.23.2 [derive_vars = 2] # Derive_in = P:\Cruise_Data_Processing\2015-15\Processing\celltm\2015-15-0341.c nv P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-ctd.XMLCON # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some records corrupted by shed wakes; salinity was cleaned. ---------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Fluorescence and pH data are nominal and unedited except that some records were removed in editing temperature and salinity. Recalibration of channel Salinity:T0:C0 was based on a post-cruise calibration and a comparison with bottle samples. Stops for bottles were often very short and there was a cruise between this one and the post-cruise calibration, but the salinity is likely good to +/- 0.002. A dissolved oxygen sensor was mounted but no data were acquired. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were collected. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see the report: 2015-15_Processing_Report.doc. ---------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (-0.2E-02 1) $END !--1--- ---2---- ---3--- ---4--- ---5---- -6-- !Pressu Temperat Fluores pH:SBE: Salinity Numb !re ure: cence: Nominal :T0:C0 er_o ! Primary URU: ~bin ! Seapoin _rec ! t ords !------ -------- ------- ------- -------- ---- *END OF HEADER 4.0 14.0820 2.454 8.267 30.8383 11 4.9 14.0793 2.298 8.267 30.8383 25 6.0 14.0723 2.245 8.267 30.8467 20 7.0 14.0683 2.203 8.266 30.8537 25 8.0 14.0680 2.287 8.265 30.8542 31 9.0 14.0674 2.372 8.265 30.8548 35 10.0 14.0662 2.597 8.265 30.8555 27 11.0 14.0514 2.598 8.263 30.8632 21 12.0 14.0046 2.651 8.262 30.8916 17 13.0 13.9267 2.510 8.257 30.9363 20 13.9 13.7912 2.621 8.254 31.0057 20 15.2 13.5317 2.623 8.237 31.1274 13 16.0 13.0596 2.282 8.218 31.3168 24 17.0 12.8145 2.015 8.201 31.4009 23 18.0 12.5840 1.932 8.184 31.4860 24 19.0 12.2411 1.700 8.167 31.5960 23 20.0 12.1159 1.649 8.156 31.6266 23 21.0 12.0830 1.488 8.148 31.6349 26 22.0 12.0003 1.472 8.142 31.6579 32 23.0 11.9791 1.426 8.136 31.6656 28 24.0 11.8676 1.392 8.128 31.7000 28 25.0 11.6744 1.305 8.119 31.7411 27 26.0 11.5177 1.232 8.110 31.7651 23 27.0 11.4097 1.138 8.100 31.7827 22 28.0 11.0644 1.045 8.084 31.8082 20 29.0 10.6878 0.911 8.071 31.8418 22 30.1 10.6107 0.818 8.059 31.8452 28 31.0 10.5981 0.780 8.055 31.8455 43 32.0 10.6035 0.781 8.052 31.8457 25 33.0 10.5967 0.767 8.048 31.8463 21 34.0 10.5222 0.724 8.043 31.8574 24 35.0 10.3620 0.644 8.037 31.8831 31 36.0 10.3029 0.586 8.029 31.9007 26 37.0 10.2619 0.540 8.022 31.9163 19 38.0 10.2162 0.562 8.016 31.9413 19 39.1 10.1641 0.528 8.010 31.9627 29 40.0 10.1382 0.505 8.006 31.9725 46 41.0 10.1204 0.514 8.001 31.9833 26 42.0 10.1229 0.489 7.998 31.9908 25 43.0 10.1051 0.484 7.995 32.0013 22 44.0 10.0636 0.469 7.992 32.0116 18 45.0 10.0150 0.462 7.989 32.0138 18 46.1 9.9849 0.456 7.987 32.0244 23 47.0 9.9067 0.413 7.985 32.0219 38 48.1 9.8224 0.360 7.984 32.0158 23 49.0 9.7938 0.372 7.983 32.0197 23 50.0 9.8288 0.359 7.980 32.0340 23 51.0 9.8701 0.353 7.975 32.0561 20 52.0 9.8347 0.342 7.971 32.0757 21 53.0 9.8104 0.337 7.968 32.0933 25 54.0 9.7122 0.304 7.965 32.0993 46 54.9 9.6793 0.263 7.961 32.1043 28 56.0 9.5249 0.207 7.951 32.1459 17 57.0 9.4050 0.192 7.943 32.1853 15 58.0 9.2937 0.170 7.934 32.2356 16 59.1 9.2512 0.156 7.927 32.2775 25 60.0 9.2589 0.147 7.921 32.2851 48 61.0 9.2563 0.147 7.915 32.2896 32 62.0 9.2458 0.147 7.913 32.2922 27 63.0 9.2276 0.147 7.910 32.3012 25 64.0 9.1906 0.147 7.904 32.3260 24 65.0 9.1713 0.143 7.899 32.3416 24 66.0 9.1194 0.145 7.892 32.3717 29 67.0 8.9854 0.158 7.882 32.4401 31 68.0 8.8314 0.122 7.872 32.5121 22 69.0 8.7928 0.119 7.863 32.5281 21 70.0 8.7623 0.124 7.859 32.5415 24 71.0 8.7135 0.113 7.852 32.5650 42 72.0 8.6434 0.104 7.843 32.6009 27 73.0 8.5324 0.131 7.833 32.6639 29 73.9 8.5063 0.119 7.826 32.6762 27 75.0 8.4952 0.111 7.821 32.6828 41