*2016/04/20 12:06:03.43 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2015/07/17 17:35:43.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 52 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 1E518085 NUMBER OF CHANNELS : 6 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 5.159143 55.90706 2 Temperature:Primary 'deg C (ITS90)' 8.413441 15.2493 3 Fluorescence:URU:Seapoint mg/m^3 0.61E-01 4.061417 4 pH:SBE:Nominal n/a 7.875719 8.278778 5 Salinity:T0:C0 PSS-78 31.53993 32.61785 6 Number_of_bin_records n/a 5 51 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2015-15\Pro $END *ADMINISTRATION MISSION : 2015-15 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Thiess M. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Juan de Fuca Strait / WCVI / Johnstone Strait STATION : T 05/ CS 06 EVENT NUMBER : 329 LATITUDE : 51 0.03000 N ! (deg min) LONGITUDE : 128 50.05000 W ! (deg min) WATER DEPTH : 65 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------- -------------- ---------- Temperature ' ' 4752 Conductivity ' ' 3396 'Pressure:Digiquartz with TC' ' ' 0585 Temperature:2 ' ' 2449 Conductivity:2 ' ' 2399 'Oxygen:SBE 43' ' ' 1119 Fluorometer:Seapoint ' ' 3685 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.4.1 2016/04/12 14:20:57 4537 4537 CLEAN 5.2.1 2016/04/12 14:22:26 4537 4537 SHIFTDAT 3.4 2016/04/12 16:47:19 4537 4537 SHIFTDAT 3.4 2016/04/12 17:34:43 4537 4537 SHIFTDAT 3.4 2016/04/13 10:24:21 4537 4537 DELETE 6.3 2016/04/13 10:29:15 4537 1579 CTDEDIT 5.0.4 2016/04/18 16:30:57 1579 1440 CALIB 11.8.1 2016/04/20 11:34:37 1440 1440 FILTERS 4.3 2016/04/20 11:35:30 1440 1440 BINAVE 4.2 2016/04/20 11:48:35 1440 52 REMOVECH 8.2 2016/04/20 11:48:42 52 52 HDREDIT2 3.0.2 2016/04/20 12:06:03 ? ? $END $REMARKS -CLEAN functions: 2016/04/12 14:21:26 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 50.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.70 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 46.32 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2016/04/18 16:30:57 139 records were deleted in this editing session. 64 changes in channel Salinity:T0:C0 -CALIB parameters: 2016/04/20 11:34:37 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 12 Salinity:T0:C0 PSS-78 10 -0.2000000E-02 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2016/04/20 11:48:42 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -HEADER EDITS: 2016/04/20 12:06:03 Applied edit header: P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\CTD Data\2015-15\2015-15-0329.hex Software Version Seasave V 7.21d Temperature SN = 4752 Conductivity SN = 3396 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 17 2015 10:39:19 NMEA Latitude = 51 00.03 N NMEA Longitude = 128 50.05 W NMEA UTC (Time) = Jul 17 2015 17:35:43 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ship: W.E. Ricker 2015-15 Station: T 05/ CS 06 Operator: HM Depth: 65 m System UTC = Jul 17 2015 17:39:19 # nquan = 14 # nvalues = 4537 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flSP: Fluorescence, Seapoint # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = flag: flag # span 0 = 1, 4537 # span 1 = 3.422, 56.322 # span 2 = 8.4117, 15.2872 # span 3 = 8.4129, 15.2917 # span 4 = 3.437457, 3.935044 # span 5 = 3.470740, 3.974515 # span 6 = 3.6630e-02, 4.3956e+00 # span 7 = 0.0000, 0.0000 # span 8 = 7.861, 8.279 # span 9 = -1.529, 1.591 # span 10 = 0, 1 # span 11 = 31.5053, 32.6219 # span 12 = 31.8411, 32.9724 # span 13 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 17 2015 17:35:43 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 4752 # 23-Jan-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35902423e-003 # 6.36413981e-004 # 2.06309769e-005 # 1.71365270e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3396 # 19-Dec-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -9.91941065e+000 # 1.31439274e+000 # 3.00845560e-005 # 6.13621985e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0585 # 30-Dec-13 # -3.951550e+004 # -4.415130e-001 # 1.282560e-002 # 3.560600e-002 # 0.000000e+000 # 3.030045e+001 # -4.415690e-004 # 4.342710e-006 # 1.736800e-009 # 0.99994600 # -2.11246 # 0.000000e+000 # 1.288270e-002 # -8.164490e+000 # # # # # # 2449 # 06-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35517974e-003 # 6.43485967e-004 # 2.33381062e-005 # 2.21338578e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2399 # 17-Jan-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.08277491e+001 # 1.61475240e+000 # 1.24520243e-003 # 1.93505039e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1119 # 21-Jan-14 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.4901e-001 # -0.5263 # -1.9196e-003 # 8.5361e-005 # -1.2856e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.0400 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

#
#
#
# # # # # # # 3685 # # # 2 # 0.000 # # # # # # # # # 0851 # Sept 4th 2014 # 4.6134 # 2.5497 # # # # # #
# datcnv_date = Aug 06 2015 12:16:02, 7.23.2 [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2015-15\RAW\CTD\2015-15-0329.hex P:\Crui se_Data_Processing\2015-15\Processing\doc\2015-15-ctd.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Nov 16 2015 17:18:25, 7.23.2 # wildedit_in = P:\Cruise_Data_Processing\2015-15\Processing\convert\2015-15-032 9.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # celltm_date = Nov 16 2015 17:21:40, 7.23.2 # celltm_in = P:\Cruise_Data_Processing\2015-15\Processing\wildedit\2015-15-0329 .cnv # celltm_alpha = 0.0245, 0.0245 # celltm_tau = 9.5000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Nov 16 2015 17:28:03, 7.23.2 [derive_vars = 2] # Derive_in = P:\Cruise_Data_Processing\2015-15\Processing\celltm\2015-15-0329.c nv P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-ctd.XMLCON # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some records corrupted by shed wakes; salinity was cleaned and a few salinity points were removed. ---------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Fluorescence and pH data are nominal and unedited except that some records were removed in editing temperature and salinity. Recalibration of channel Salinity:T0:C0 was based on a post-cruise calibration and a comparison with bottle samples. Stops for bottles were often very short and there was a cruise between this one and the post-cruise calibration, but the salinity is likely good to +/- 0.002. A dissolved oxygen sensor was mounted but no data were acquired. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were collected. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see the report: 2015-15_Processing_Report.doc. ---------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (-0.2E-02 1) $END !--1--- ---2---- ---3--- ---4--- ---5---- -6-- !Pressu Temperat Fluores pH:SBE: Salinity Numb !re ure: cence: Nominal :T0:C0 er_o ! Primary URU: ~bin ! Seapoin _rec ! t ords !------ -------- ------- ------- -------- ---- *END OF HEADER 5.2 15.2466 0.808 8.244 31.5400 35 6.0 15.2468 0.805 8.245 31.5399 37 7.0 15.2474 0.799 8.246 31.5404 47 8.0 15.2493 0.899 8.247 31.5411 5 9.1 15.1771 1.472 8.248 31.5438 42 10.1 15.1280 1.823 8.249 31.5459 32 11.0 15.0241 2.066 8.251 31.5525 25 12.0 14.9065 2.445 8.253 31.5602 18 13.0 14.7893 2.674 8.256 31.5660 20 14.1 14.3702 2.791 8.257 31.5948 29 15.0 14.1897 3.260 8.265 31.6075 29 16.0 13.9631 3.492 8.273 31.6221 20 17.0 13.8758 3.576 8.279 31.6275 18 18.0 13.6741 3.713 8.268 31.6443 19 19.1 12.7114 4.061 8.244 31.7225 34 19.9 12.3034 3.863 8.232 31.7457 45 21.0 12.0719 3.897 8.204 31.7601 22 22.0 11.6862 3.131 8.166 31.7965 18 23.0 11.0558 2.198 8.131 31.8760 17 24.0 10.5766 1.280 8.102 31.9658 19 25.0 10.3407 0.995 8.076 32.0350 22 26.1 10.0326 0.748 8.048 32.0800 35 27.0 9.7339 0.587 8.032 32.1057 47 28.0 9.4466 0.358 8.017 32.1486 27 29.0 9.2588 0.332 8.006 32.1843 21 30.0 9.2364 0.224 7.995 32.2205 19 31.0 9.1255 0.145 7.986 32.2632 21 32.0 8.9377 0.118 7.976 32.3143 24 33.0 8.8201 0.092 7.965 32.3609 26 34.0 8.7300 0.072 7.956 32.4130 34 34.9 8.6801 0.081 7.948 32.4446 31 36.0 8.6282 0.073 7.939 32.4751 21 37.0 8.5962 0.066 7.934 32.4957 18 38.0 8.5583 0.061 7.928 32.5198 19 39.1 8.5114 0.064 7.922 32.5500 32 40.0 8.4943 0.064 7.911 32.5638 27 41.0 8.4874 0.067 7.908 32.5701 16 42.0 8.4757 0.068 7.905 32.5807 16 43.0 8.4684 0.067 7.904 32.5867 17 44.1 8.4622 0.064 7.900 32.5910 34 45.0 8.4588 0.063 7.895 32.5936 29 46.0 8.4532 0.069 7.894 32.5961 19 47.0 8.4520 0.062 7.893 32.5977 18 48.0 8.4495 0.061 7.890 32.5991 21 49.0 8.4396 0.064 7.890 32.6035 35 49.9 8.4361 0.068 7.885 32.6054 36 51.0 8.4344 0.073 7.885 32.6066 22 52.0 8.4316 0.062 7.884 32.6088 24 53.0 8.4276 0.061 7.881 32.6106 35 54.0 8.4224 0.069 7.880 32.6128 41 55.0 8.4175 0.062 7.879 32.6156 51 55.9 8.4134 0.061 7.876 32.6179 32