*2016/04/20 12:06:03.38 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2015/07/17 15:58:20.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 53 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : A94EDE1C NUMBER OF CHANNELS : 6 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 4.3918 55.85416 2 Temperature:Primary 'deg C (ITS90)' 9.359687 15.23961 3 Fluorescence:URU:Seapoint mg/m^3 0.3754193 4.785875 4 pH:SBE:Nominal n/a 7.957516 8.231334 5 Salinity:T0:C0 PSS-78 31.49487 32.65106 6 Number_of_bin_records n/a 6 51 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2015-15\Pro $END *ADMINISTRATION MISSION : 2015-15 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Thiess M. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Juan de Fuca Strait / WCVI / Johnstone Strait STATION : T 06 EVENT NUMBER : 326 LATITUDE : 50 55.56000 N ! (deg min) LONGITUDE : 129 0.42000 W ! (deg min) WATER DEPTH : 55 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------- -------------- ---------- Temperature ' ' 4752 Conductivity ' ' 3396 'Pressure:Digiquartz with TC' ' ' 0585 Temperature:2 ' ' 2449 Conductivity:2 ' ' 2399 'Oxygen:SBE 43' ' ' 1119 Fluorometer:Seapoint ' ' 3685 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.4.1 2016/04/12 14:20:56 4619 4619 CLEAN 5.2.1 2016/04/12 14:22:25 4619 4619 SHIFTDAT 3.4 2016/04/12 16:47:18 4619 4619 SHIFTDAT 3.4 2016/04/12 17:34:42 4619 4619 SHIFTDAT 3.4 2016/04/13 10:24:20 4619 4619 DELETE 6.3 2016/04/13 10:29:15 4619 1661 CTDEDIT 5.0.4 2016/04/18 15:22:27 1661 1398 CALIB 11.8.1 2016/04/20 11:34:36 1398 1398 FILTERS 4.3 2016/04/20 11:35:29 1398 1398 BINAVE 4.2 2016/04/20 11:48:35 1398 53 REMOVECH 8.2 2016/04/20 11:48:42 53 53 HDREDIT2 3.0.2 2016/04/20 12:06:03 ? ? $END $REMARKS -CLEAN functions: 2016/04/12 14:21:26 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 50.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.70 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 46.14 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2016/04/18 15:22:27 263 records were deleted in this editing session. 56 changes in channel Salinity:T0:C0 -CALIB parameters: 2016/04/20 11:34:36 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 12 Salinity:T0:C0 PSS-78 10 -0.2000000E-02 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2016/04/20 11:48:42 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -HEADER EDITS: 2016/04/20 12:06:03 Applied edit header: P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\CTD Data\2015-15\2015-15-0326.hex Software Version Seasave V 7.21d Temperature SN = 4752 Conductivity SN = 3396 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 17 2015 09:02:13 NMEA Latitude = 50 55.56 N NMEA Longitude = 129 00.42 W NMEA UTC (Time) = Jul 17 2015 15:58:20 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ship: W.E. Ricker 2015-15 Station: T 06 Operator: HM Depth: 55 m System UTC = Jul 17 2015 16:02:13 # nquan = 14 # nvalues = 4619 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flSP: Fluorescence, Seapoint # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = flag: flag # span 0 = 1, 4619 # span 1 = 3.095, 56.137 # span 2 = 9.2974, 15.2426 # span 3 = 9.3073, 15.2437 # span 4 = 3.520811, 3.926858 # span 5 = 3.554813, 3.965701 # span 6 = 2.6862e-01, 7.2527e+00 # span 7 = 0.0000, 0.0000 # span 8 = 7.947, 8.234 # span 9 = -1.546, 1.515 # span 10 = 0, 1 # span 11 = 31.4773, 32.6761 # span 12 = 31.8138, 33.0166 # span 13 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 17 2015 15:58:20 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 4752 # 23-Jan-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35902423e-003 # 6.36413981e-004 # 2.06309769e-005 # 1.71365270e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3396 # 19-Dec-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -9.91941065e+000 # 1.31439274e+000 # 3.00845560e-005 # 6.13621985e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0585 # 30-Dec-13 # -3.951550e+004 # -4.415130e-001 # 1.282560e-002 # 3.560600e-002 # 0.000000e+000 # 3.030045e+001 # -4.415690e-004 # 4.342710e-006 # 1.736800e-009 # 0.99994600 # -2.11246 # 0.000000e+000 # 1.288270e-002 # -8.164490e+000 # # # # # # 2449 # 06-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35517974e-003 # 6.43485967e-004 # 2.33381062e-005 # 2.21338578e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2399 # 17-Jan-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.08277491e+001 # 1.61475240e+000 # 1.24520243e-003 # 1.93505039e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1119 # 21-Jan-14 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.4901e-001 # -0.5263 # -1.9196e-003 # 8.5361e-005 # -1.2856e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.0400 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

#
#
#
# # # # # # # 3685 # # # 2 # 0.000 # # # # # # # # # 0851 # Sept 4th 2014 # 4.6134 # 2.5497 # # # # # #
# datcnv_date = Aug 06 2015 12:16:01, 7.23.2 [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2015-15\RAW\CTD\2015-15-0326.hex P:\Crui se_Data_Processing\2015-15\Processing\doc\2015-15-ctd.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Nov 16 2015 17:18:24, 7.23.2 # wildedit_in = P:\Cruise_Data_Processing\2015-15\Processing\convert\2015-15-032 6.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # celltm_date = Nov 16 2015 17:21:39, 7.23.2 # celltm_in = P:\Cruise_Data_Processing\2015-15\Processing\wildedit\2015-15-0326 .cnv # celltm_alpha = 0.0245, 0.0245 # celltm_tau = 9.5000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Nov 16 2015 17:28:03, 7.23.2 [derive_vars = 2] # Derive_in = P:\Cruise_Data_Processing\2015-15\Processing\celltm\2015-15-0326.c nv P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-ctd.XMLCON # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove records corrupted by shed wakes; salinity was cleaned. ---------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Fluorescence and pH data are nominal and unedited except that some records were removed in editing temperature and salinity. Recalibration of channel Salinity:T0:C0 was based on a post-cruise calibration and a comparison with bottle samples. Stops for bottles were often very short and there was a cruise between this one and the post-cruise calibration, but the salinity is likely good to +/- 0.002. A dissolved oxygen sensor was mounted but no data were acquired. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were collected. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see the report: 2015-15_Processing_Report.doc. ---------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (-0.2E-02 1) $END !--1--- ---2---- ---3--- ---4--- ---5---- -6-- !Pressu Temperat Fluores pH:SBE: Salinity Numb !re ure: cence: Nominal :T0:C0 er_o ! Primary URU: ~bin ! Seapoin _rec ! t ords !------ -------- ------- ------- -------- ---- *END OF HEADER 4.4 15.2396 0.996 8.229 31.4949 10 5.0 15.2383 0.963 8.229 31.4950 39 6.0 15.2260 1.223 8.229 31.4954 30 7.4 15.1835 1.783 8.230 31.4967 6 8.0 15.1554 1.885 8.230 31.4979 24 9.0 15.0961 2.308 8.231 31.4994 26 10.0 15.0236 2.585 8.231 31.5009 24 11.0 14.8953 2.967 8.231 31.5068 23 12.0 14.7719 3.414 8.229 31.5159 22 13.0 14.6837 3.519 8.229 31.5213 22 14.0 14.5159 3.531 8.226 31.5397 22 15.0 14.1786 4.520 8.220 31.5752 25 16.0 13.7706 4.786 8.214 31.6145 32 17.0 13.6320 4.693 8.210 31.6272 36 18.0 13.5217 4.636 8.205 31.6378 25 19.0 13.1403 4.580 8.189 31.6858 22 20.0 12.3015 3.539 8.168 31.8193 24 21.0 11.7149 2.483 8.147 31.9141 31 22.0 11.6986 2.142 8.129 31.9177 31 23.0 11.6714 2.113 8.118 31.9255 26 24.0 11.6418 2.272 8.111 31.9357 22 25.0 11.6019 2.036 8.104 31.9452 21 26.0 11.4797 1.909 8.097 31.9714 24 27.1 11.1919 1.425 8.089 32.0733 41 27.9 10.8753 1.130 8.076 32.1410 34 29.0 10.8281 1.154 8.065 32.1456 23 30.0 10.8028 1.323 8.060 32.1574 28 31.0 10.8129 1.231 8.057 32.1799 30 32.0 10.8265 1.231 8.056 32.1963 20 33.0 10.8180 1.171 8.052 32.2062 18 34.0 10.7937 1.243 8.052 32.2217 18 35.1 10.7210 1.117 8.048 32.2430 51 35.9 10.6967 1.125 8.044 32.2564 26 37.0 10.6503 1.005 8.042 32.2759 18 38.0 10.6267 1.036 8.039 32.2846 19 39.0 10.6033 0.933 8.038 32.2904 24 40.0 10.5636 1.125 8.037 32.2996 44 41.0 10.4345 0.879 8.034 32.3299 44 42.0 10.2086 0.739 8.022 32.3778 24 43.0 10.1552 0.726 8.016 32.3893 18 44.0 10.0765 0.649 8.012 32.4117 16 45.0 10.0588 0.701 8.011 32.4223 17 46.1 10.0436 0.600 8.007 32.4371 22 47.0 10.0148 0.565 8.006 32.4533 36 48.0 9.9719 0.568 7.999 32.4737 31 48.9 9.9048 0.582 7.996 32.5035 31 49.9 9.8687 0.554 7.989 32.5160 34 51.0 9.7582 0.472 7.984 32.5462 21 52.0 9.6438 0.447 7.979 32.5803 26 53.0 9.5088 0.456 7.971 32.6137 28 54.0 9.4641 0.412 7.962 32.6239 25 55.0 9.3935 0.427 7.960 32.6418 29 55.9 9.3597 0.375 7.958 32.6511 31