*2016/04/20 12:06:03.35 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2015/07/17 13:00:53.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 88 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 3E43D129 NUMBER OF CHANNELS : 6 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 4.092988 91.549 2 Temperature:Primary 'deg C (ITS90)' 8.065871 13.18128 3 Fluorescence:URU:Seapoint mg/m^3 0.73E-01 2.449741 4 pH:SBE:Nominal n/a 7.867 8.130733 5 Salinity:T0:C0 PSS-78 31.92332 33.25833 6 Number_of_bin_records n/a 7 83 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2015-15\Pro $END *ADMINISTRATION MISSION : 2015-15 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Thiess M. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Juan de Fuca Strait / WCVI / Johnstone Strait STATION : T 07 EVENT NUMBER : 323 LATITUDE : 50 49.43000 N ! (deg min) LONGITUDE : 129 13.45000 W ! (deg min) WATER DEPTH : 102 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------- -------------- ---------- Temperature ' ' 4752 Conductivity ' ' 3396 'Pressure:Digiquartz with TC' ' ' 0585 Temperature:2 ' ' 2449 Conductivity:2 ' ' 2399 'Oxygen:SBE 43' ' ' 1119 Fluorometer:Seapoint ' ' 3685 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.4.1 2016/04/12 14:20:55 7046 7046 CLEAN 5.2.1 2016/04/12 14:22:24 7046 7046 SHIFTDAT 3.4 2016/04/12 16:47:17 7046 7046 SHIFTDAT 3.4 2016/04/12 17:34:40 7046 7046 SHIFTDAT 3.4 2016/04/13 10:24:19 7046 7046 DELETE 6.3 2016/04/13 10:29:14 7046 2541 CTDEDIT 5.0.4 2016/04/18 15:15:59 2541 2348 CALIB 11.8.1 2016/04/20 11:34:36 2348 2348 FILTERS 4.3 2016/04/20 11:35:29 2348 2348 BINAVE 4.2 2016/04/20 11:48:35 2348 88 REMOVECH 8.2 2016/04/20 11:48:42 88 88 HDREDIT2 3.0.2 2016/04/20 12:06:03 ? ? $END $REMARKS -CLEAN functions: 2016/04/12 14:21:26 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 50.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.70 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 82.22 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2016/04/18 15:15:59 193 records were deleted in this editing session. 48 changes in channel Salinity:T0:C0 -CALIB parameters: 2016/04/20 11:34:36 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 12 Salinity:T0:C0 PSS-78 10 -0.2000000E-02 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2016/04/20 11:48:42 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -HEADER EDITS: 2016/04/20 12:06:03 Applied edit header: P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\CTD Data\2015-15\2015-15-0323.hex Software Version Seasave V 7.21d Temperature SN = 4752 Conductivity SN = 3396 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 17 2015 06:05:14 NMEA Latitude = 50 49.43 N NMEA Longitude = 129 13.45 W NMEA UTC (Time) = Jul 17 2015 13:00:53 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ship: W.E. Ricker 2015-15 Station: T 07 Operator: HM Depth: 102 m System UTC = Jul 17 2015 13:05:14 # nquan = 14 # nvalues = 7046 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flSP: Fluorescence, Seapoint # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = flag: flag # span 0 = 1, 7046 # span 1 = 3.518, 92.224 # span 2 = 8.0640, 13.2122 # span 3 = 8.0701, 13.2101 # span 4 = 3.468630, 3.791113 # span 5 = 3.502380, 3.828671 # span 6 = 4.8840e-02, 5.3480e+00 # span 7 = 0.0000, 0.0000 # span 8 = 7.862, 8.136 # span 9 = -1.683, 1.721 # span 10 = 0, 1 # span 11 = 31.8987, 33.2624 # span 12 = 32.2546, 33.6151 # span 13 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 17 2015 13:00:53 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 4752 # 23-Jan-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35902423e-003 # 6.36413981e-004 # 2.06309769e-005 # 1.71365270e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3396 # 19-Dec-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -9.91941065e+000 # 1.31439274e+000 # 3.00845560e-005 # 6.13621985e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0585 # 30-Dec-13 # -3.951550e+004 # -4.415130e-001 # 1.282560e-002 # 3.560600e-002 # 0.000000e+000 # 3.030045e+001 # -4.415690e-004 # 4.342710e-006 # 1.736800e-009 # 0.99994600 # -2.11246 # 0.000000e+000 # 1.288270e-002 # -8.164490e+000 # # # # # # 2449 # 06-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35517974e-003 # 6.43485967e-004 # 2.33381062e-005 # 2.21338578e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2399 # 17-Jan-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.08277491e+001 # 1.61475240e+000 # 1.24520243e-003 # 1.93505039e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1119 # 21-Jan-14 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.4901e-001 # -0.5263 # -1.9196e-003 # 8.5361e-005 # -1.2856e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.0400 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

#
#
#
# # # # # # # 3685 # # # 2 # 0.000 # # # # # # # # # 0851 # Sept 4th 2014 # 4.6134 # 2.5497 # # # # # #
# datcnv_date = Aug 06 2015 12:16:00, 7.23.2 [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2015-15\RAW\CTD\2015-15-0323.hex P:\Crui se_Data_Processing\2015-15\Processing\doc\2015-15-ctd.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Nov 16 2015 17:18:24, 7.23.2 # wildedit_in = P:\Cruise_Data_Processing\2015-15\Processing\convert\2015-15-032 3.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # celltm_date = Nov 16 2015 17:21:39, 7.23.2 # celltm_in = P:\Cruise_Data_Processing\2015-15\Processing\wildedit\2015-15-0323 .cnv # celltm_alpha = 0.0245, 0.0245 # celltm_tau = 9.5000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Nov 16 2015 17:28:03, 7.23.2 [derive_vars = 2] # Derive_in = P:\Cruise_Data_Processing\2015-15\Processing\celltm\2015-15-0323.c nv P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-ctd.XMLCON # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove records corrupted by shed wakes; salinity was cleaned. ---------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Fluorescence and pH data are nominal and unedited except that some records were removed in editing temperature and salinity. Recalibration of channel Salinity:T0:C0 was based on a post-cruise calibration and a comparison with bottle samples. Stops for bottles were often very short and there was a cruise between this one and the post-cruise calibration, but the salinity is likely good to +/- 0.002. A dissolved oxygen sensor was mounted but no data were acquired. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were collected. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see the report: 2015-15_Processing_Report.doc. ---------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (-0.2E-02 1) $END !--1--- ---2---- ---3--- ---4--- ---5---- -6-- !Pressu Temperat Fluores pH:SBE: Salinity Numb !re ure: cence: Nominal :T0:C0 er_o ! Primary URU: ~bin ! Seapoin _rec ! t ords !------ -------- ------- ------- -------- ---- *END OF HEADER 4.1 13.1759 2.325 8.124 31.9238 83 5.0 13.1813 2.055 8.126 31.9233 45 7.1 13.1532 2.413 8.131 31.9249 32 7.9 13.1449 2.267 8.131 31.9258 15 9.0 13.1510 1.966 8.131 31.9259 20 10.0 13.0994 2.202 8.127 31.9282 20 11.0 13.0863 2.027 8.127 31.9289 24 12.0 12.9896 2.197 8.124 31.9338 29 13.0 12.9776 2.051 8.122 31.9330 27 14.0 12.9529 2.137 8.119 31.9321 29 15.0 12.9123 2.200 8.118 31.9329 28 16.0 12.8325 2.293 8.114 31.9344 25 17.0 12.7816 2.450 8.113 31.9354 27 18.0 12.6801 2.254 8.108 31.9385 32 19.0 12.5497 2.343 8.104 31.9410 24 20.0 12.4557 2.315 8.097 31.9456 19 21.0 12.1379 2.245 8.086 31.9749 17 22.0 11.8120 2.196 8.076 32.0029 20 23.0 11.6885 2.086 8.071 32.0144 27 24.0 11.4746 1.749 8.062 32.0678 33 25.0 11.1290 1.688 8.055 32.1384 36 26.0 10.9940 1.447 8.051 32.1570 31 27.0 10.8014 1.452 8.043 32.2112 23 28.0 10.5952 1.114 8.035 32.2840 18 29.0 10.4953 1.054 8.030 32.3224 15 30.0 10.4782 1.131 8.026 32.3294 18 31.0 10.4746 0.971 8.024 32.3315 24 32.0 10.4705 1.062 8.021 32.3339 33 33.0 10.4675 0.863 8.020 32.3364 33 34.0 10.4683 1.031 8.018 32.3370 27 35.0 10.4658 0.973 8.016 32.3398 27 36.0 10.4649 0.968 8.015 32.3413 28 37.0 10.4644 0.971 8.015 32.3426 26 38.0 10.4641 0.983 8.015 32.3439 23 39.0 10.4573 1.043 8.011 32.3462 20 40.0 10.4343 0.905 8.011 32.3525 18 41.0 10.3810 0.803 8.007 32.3656 20 42.0 10.3257 0.851 8.007 32.3747 24 43.0 10.2079 0.846 8.002 32.3869 36 44.0 10.1134 0.733 7.993 32.3940 31 45.0 10.0516 0.674 7.984 32.3981 30 46.0 10.0162 0.633 7.975 32.3970 25 47.0 9.9538 0.593 7.968 32.3978 20 48.0 9.8955 0.577 7.963 32.4029 19 49.0 9.8546 0.678 7.960 32.4100 21 50.0 9.8110 0.544 7.956 32.4189 30 51.0 9.7789 0.570 7.952 32.4273 29 52.0 9.7269 0.495 7.948 32.4494 21 53.0 9.6260 0.509 7.943 32.4849 21 54.0 9.5428 0.480 7.939 32.5059 26 55.0 9.4136 0.437 7.933 32.5454 37 56.0 9.3210 0.390 7.927 32.6142 29 57.0 9.3227 0.355 7.925 32.6161 20 58.0 9.3216 0.373 7.922 32.6223 17 59.0 9.3048 0.417 7.921 32.6320 28 60.0 9.2992 0.376 7.920 32.6377 45 60.9 9.2953 0.320 7.918 32.6429 14 62.0 9.2910 0.357 7.917 32.6546 13 63.0 9.2794 0.372 7.916 32.6631 15 64.0 9.2664 0.374 7.916 32.6701 18 65.0 9.2165 0.332 7.916 32.6881 34 65.9 9.2029 0.359 7.911 32.6903 30 67.0 9.1896 0.353 7.911 32.6910 21 68.0 9.1714 0.325 7.909 32.6946 27 69.0 9.1524 0.315 7.907 32.7032 35 70.0 9.1507 0.316 7.909 32.7103 28 71.0 9.1034 0.259 7.909 32.7538 17 72.0 9.0262 0.236 7.909 32.8040 20 73.0 8.9461 0.246 7.909 32.8508 20 74.0 8.8614 0.203 7.907 32.8949 23 75.0 8.8313 0.181 7.907 32.9088 30 76.0 8.7922 0.165 7.904 32.9268 39 77.0 8.7574 0.162 7.903 32.9417 34 78.0 8.7463 0.164 7.901 32.9467 24 79.0 8.7162 0.164 7.898 32.9604 20 80.0 8.6969 0.152 7.898 32.9687 21 81.0 8.6294 0.142 7.898 33.0015 28 82.0 8.6375 0.144 7.896 32.9970 35 82.9 8.6202 0.144 7.894 33.0058 32 84.0 8.5472 0.129 7.894 33.0423 26 85.0 8.5116 0.128 7.892 33.0593 38 86.0 8.4208 0.104 7.886 33.1000 20 87.0 8.3767 0.103 7.883 33.1200 18 88.0 8.2816 0.099 7.881 33.1643 21 88.9 8.1648 0.092 7.877 33.2158 40 90.0 8.1149 0.078 7.872 33.2367 23 91.1 8.0896 0.081 7.869 33.2482 39 91.5 8.0659 0.073 7.867 33.2583 7