*2016/04/20 12:06:03.16 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2015/07/16 21:18:46.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 79 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : EA84400C NUMBER OF CHANNELS : 6 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 3.409625 80.926 2 Temperature:Primary 'deg C (ITS90)' 8.567197 16.4384 3 Fluorescence:URU:Seapoint mg/m^3 0.9012499E-01 5.086261 4 pH:SBE:Nominal n/a 7.931649 8.223766 5 Salinity:T0:C0 PSS-78 31.57866 33.05092 6 Number_of_bin_records n/a 8 57 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2015-15\Pro $END *ADMINISTRATION MISSION : 2015-15 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Thiess M. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Juan de Fuca Strait / WCVI / Johnstone Strait STATION : VI 26 EVENT NUMBER : 314 LATITUDE : 50 35.31000 N ! (deg min) LONGITUDE : 128 22.89000 W ! (deg min) WATER DEPTH : 89 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------- -------------- ---------- Temperature ' ' 4752 Conductivity ' ' 3396 'Pressure:Digiquartz with TC' ' ' 0585 Temperature:2 ' ' 2449 Conductivity:2 ' ' 2399 'Oxygen:SBE 43' ' ' 1119 Fluorometer:Seapoint ' ' 3685 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.4.1 2016/04/12 14:20:50 5260 5260 CLEAN 5.2.1 2016/04/12 14:22:19 5260 5260 SHIFTDAT 3.4 2016/04/12 16:47:10 5260 5260 SHIFTDAT 3.4 2016/04/12 17:34:36 5260 5260 SHIFTDAT 3.4 2016/04/13 10:24:14 5260 5260 DELETE 6.3 2016/04/13 10:29:10 5260 2122 CTDEDIT 5.0.4 2016/04/18 14:52:10 2122 2021 CALIB 11.8.1 2016/04/20 11:34:33 2021 2021 FILTERS 4.3 2016/04/20 11:35:27 2021 2021 BINAVE 4.2 2016/04/20 11:48:33 2021 79 REMOVECH 8.2 2016/04/20 11:48:42 79 79 HDREDIT2 3.0.2 2016/04/20 12:06:03 ? ? $END $REMARKS -CLEAN functions: 2016/04/12 14:21:26 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 50.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.70 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 71.48 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2016/04/18 14:52:10 101 records were deleted in this editing session. 34 changes in channel Salinity:T0:C0 -CALIB parameters: 2016/04/20 11:34:33 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 12 Salinity:T0:C0 PSS-78 10 -0.2000000E-02 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2016/04/20 11:48:42 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -HEADER EDITS: 2016/04/20 12:06:03 Applied edit header: P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\CTD Data\2015-15\2015-15-0314.hex Software Version Seasave V 7.21d Temperature SN = 4752 Conductivity SN = 3396 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 16 2015 14:22:13 NMEA Latitude = 50 35.31 N NMEA Longitude = 128 22.89 W NMEA UTC (Time) = Jul 16 2015 21:18:46 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ship: W.E. Ricker 2015-15 Station: VI 26 Operator: HM Depth: 89 m System UTC = Jul 16 2015 21:22:13 # nquan = 14 # nvalues = 5260 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flSP: Fluorescence, Seapoint # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = flag: flag # span 0 = 1, 5260 # span 1 = 3.301, 81.476 # span 2 = 8.5528, 16.4461 # span 3 = 8.5547, 16.4490 # span 4 = 3.492814, 4.044746 # span 5 = 3.527434, 4.085169 # span 6 = 7.3260e-02, 5.9341e+00 # span 7 = 0.0000, 0.0000 # span 8 = 7.927, 8.225 # span 9 = -1.581, 1.464 # span 10 = 0, 1 # span 11 = 31.4138, 33.0610 # span 12 = 31.8493, 33.4235 # span 13 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 16 2015 21:18:46 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 4752 # 23-Jan-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35902423e-003 # 6.36413981e-004 # 2.06309769e-005 # 1.71365270e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3396 # 19-Dec-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -9.91941065e+000 # 1.31439274e+000 # 3.00845560e-005 # 6.13621985e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0585 # 30-Dec-13 # -3.951550e+004 # -4.415130e-001 # 1.282560e-002 # 3.560600e-002 # 0.000000e+000 # 3.030045e+001 # -4.415690e-004 # 4.342710e-006 # 1.736800e-009 # 0.99994600 # -2.11246 # 0.000000e+000 # 1.288270e-002 # -8.164490e+000 # # # # # # 2449 # 06-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35517974e-003 # 6.43485967e-004 # 2.33381062e-005 # 2.21338578e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2399 # 17-Jan-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.08277491e+001 # 1.61475240e+000 # 1.24520243e-003 # 1.93505039e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1119 # 21-Jan-14 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.4901e-001 # -0.5263 # -1.9196e-003 # 8.5361e-005 # -1.2856e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.0400 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

#
#
#
# # # # # # # 3685 # # # 2 # 0.000 # # # # # # # # # 0851 # Sept 4th 2014 # 4.6134 # 2.5497 # # # # # #
# datcnv_date = Aug 06 2015 12:15:57, 7.23.2 [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2015-15\RAW\CTD\2015-15-0314.hex P:\Crui se_Data_Processing\2015-15\Processing\doc\2015-15-ctd.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Nov 16 2015 17:18:23, 7.23.2 # wildedit_in = P:\Cruise_Data_Processing\2015-15\Processing\convert\2015-15-031 4.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # celltm_date = Nov 16 2015 17:21:38, 7.23.2 # celltm_in = P:\Cruise_Data_Processing\2015-15\Processing\wildedit\2015-15-0314 .cnv # celltm_alpha = 0.0245, 0.0245 # celltm_tau = 9.5000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Nov 16 2015 17:28:01, 7.23.2 [derive_vars = 2] # Derive_in = P:\Cruise_Data_Processing\2015-15\Processing\celltm\2015-15-0314.c nv P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-ctd.XMLCON # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove records corrupted by shed wakes; salinity was cleaned. ---------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Fluorescence and pH data are nominal and unedited except that some records were removed in editing temperature and salinity. Recalibration of channel Salinity:T0:C0 was based on a post-cruise calibration and a comparison with bottle samples. Stops for bottles were often very short and there was a cruise between this one and the post-cruise calibration, but the salinity is likely good to +/- 0.002. A dissolved oxygen sensor was mounted but no data were acquired. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were collected. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see the report: 2015-15_Processing_Report.doc. ---------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (-0.2E-02 1) $END !--1--- ---2---- ---3--- ---4--- ---5---- -6-- !Pressu Temperat Fluores pH:SBE: Salinity Numb !re ure: cence: Nominal :T0:C0 er_o ! Primary URU: ~bin ! Seapoin _rec ! t ords !------ -------- ------- ------- -------- ---- *END OF HEADER 3.4 16.4384 0.090 8.210 31.5787 8 4.1 15.7178 0.094 8.212 31.6107 12 5.0 14.9607 0.119 8.216 31.6145 32 5.9 14.6894 0.127 8.220 31.6169 22 7.0 13.5772 0.175 8.220 31.6569 22 8.0 13.1869 0.235 8.221 31.6686 25 9.0 13.0697 0.287 8.224 31.6695 30 10.0 12.5680 0.449 8.222 31.7173 29 11.0 12.0952 0.611 8.222 31.7762 25 12.0 11.8637 0.661 8.219 31.8652 21 13.0 11.4904 1.144 8.214 31.9574 20 14.0 11.1967 1.781 8.212 32.0040 20 15.0 11.1334 2.339 8.210 32.0248 21 16.0 11.0962 2.856 8.209 32.0340 23 17.0 11.0355 3.276 8.206 32.0437 25 18.0 11.0064 3.762 8.206 32.0484 28 19.0 10.9785 4.129 8.206 32.0543 33 20.0 10.9591 4.359 8.204 32.0568 31 21.0 10.9044 4.413 8.202 32.0596 26 22.0 10.8221 4.548 8.198 32.0665 22 23.0 10.7151 4.710 8.192 32.0770 21 24.0 10.6159 4.880 8.184 32.0828 22 25.0 10.5014 5.086 8.174 32.0942 23 26.0 10.4203 3.844 8.166 32.1324 24 27.0 10.3677 3.062 8.161 32.1737 25 28.0 10.2647 2.514 8.156 32.1905 28 29.0 10.2611 2.160 8.151 32.2246 30 30.0 10.2451 1.931 8.148 32.2449 25 31.0 10.2188 1.568 8.146 32.3129 23 32.0 10.2256 1.411 8.143 32.3345 25 33.0 10.2431 1.315 8.142 32.3489 30 34.0 10.2590 1.339 8.139 32.3626 27 35.0 10.2610 1.318 8.135 32.3775 21 36.0 10.2422 1.878 8.134 32.3896 19 37.0 10.2267 1.319 8.134 32.4085 21 38.0 10.1914 1.174 8.131 32.4577 27 39.0 10.1604 1.166 8.125 32.4932 31 40.0 10.1574 1.191 8.120 32.4992 25 41.0 10.1566 1.703 8.115 32.5052 23 42.0 10.1156 1.907 8.110 32.5215 25 43.0 10.1006 1.666 8.106 32.5252 24 44.0 10.0994 1.749 8.102 32.5284 23 45.0 10.0992 1.765 8.100 32.5299 21 46.0 10.0972 1.874 8.095 32.5332 21 47.0 10.0851 2.267 8.087 32.5512 24 48.0 10.0540 2.430 8.076 32.5930 27 49.0 10.0276 2.511 8.070 32.6165 27 50.0 10.0559 2.442 8.065 32.6291 27 51.0 10.0652 2.668 8.064 32.6361 27 52.0 10.0513 2.722 8.063 32.6347 30 53.0 10.0516 2.719 8.059 32.6488 25 54.0 10.0477 2.663 8.055 32.6618 21 55.0 10.0285 2.557 8.052 32.6673 17 56.0 10.0168 2.412 8.050 32.6753 17 57.0 10.0036 2.567 8.046 32.6856 18 58.0 9.9337 2.374 8.042 32.7015 26 59.0 9.7523 1.871 8.028 32.7353 36 60.0 9.5283 1.179 8.010 32.7665 28 61.0 9.3295 0.725 7.999 32.8283 26 62.0 9.1531 0.551 7.997 32.8665 32 63.0 8.9685 0.358 7.997 32.8810 33 64.0 8.8927 0.312 7.994 32.9013 22 65.0 8.8746 0.258 7.993 32.9095 19 66.0 8.8581 0.214 7.993 32.9137 18 67.0 8.8317 0.235 7.993 32.9202 18 68.0 8.7727 0.173 7.991 32.9340 21 69.0 8.6791 0.150 7.986 32.9753 28 70.0 8.6654 0.142 7.980 32.9866 44 71.0 8.6649 0.129 7.972 32.9920 33 72.0 8.6594 0.123 7.966 32.9986 22 73.0 8.6540 0.116 7.962 33.0028 20 74.0 8.6509 0.116 7.960 33.0054 21 75.0 8.6493 0.126 7.958 33.0067 21 76.0 8.6479 0.123 7.955 33.0079 24 77.0 8.6435 0.133 7.953 33.0106 27 78.1 8.6192 0.122 7.949 33.0227 32 79.0 8.5991 0.113 7.944 33.0327 42 80.0 8.5868 0.109 7.939 33.0396 46 80.9 8.5672 0.135 7.932 33.0509 57