*2016/04/20 12:06:03.08 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2015/07/16 19:43:07.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 110 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 585374CF NUMBER OF CHANNELS : 6 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 3.426304 112.1497 2 Temperature:Primary 'deg C (ITS90)' 7.687542 16.49749 3 Fluorescence:URU:Seapoint mg/m^3 0.61E-01 4.61236 4 pH:SBE:Nominal n/a 7.873576 8.2149 5 Salinity:T0:C0 PSS-78 31.59717 33.42398 6 Number_of_bin_records n/a 15 59 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2015-15\Pro $END *ADMINISTRATION MISSION : 2015-15 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Thiess M. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Juan de Fuca Strait / WCVI / Johnstone Strait STATION : VI 25 EVENT NUMBER : 311 LATITUDE : 50 30.23000 N ! (deg min) LONGITUDE : 128 19.59000 W ! (deg min) WATER DEPTH : 122 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------- -------------- ---------- Temperature ' ' 4752 Conductivity ' ' 3396 'Pressure:Digiquartz with TC' ' ' 0585 Temperature:2 ' ' 2449 Conductivity:2 ' ' 2399 'Oxygen:SBE 43' ' ' 1119 Fluorometer:Seapoint ' ' 3685 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.4.1 2016/04/12 14:20:48 6598 6598 CLEAN 5.2.1 2016/04/12 14:22:17 6598 6598 SHIFTDAT 3.4 2016/04/12 16:47:09 6598 6598 SHIFTDAT 3.4 2016/04/12 17:34:34 6598 6598 SHIFTDAT 3.4 2016/04/13 10:24:13 6598 6598 DELETE 6.3 2016/04/13 10:29:09 6598 2871 CTDEDIT 5.0.4 2016/04/18 12:16:05 2871 2800 CALIB 11.8.1 2016/04/20 11:34:33 2800 2800 FILTERS 4.3 2016/04/20 11:35:26 2800 2800 BINAVE 4.2 2016/04/20 11:48:33 2800 110 REMOVECH 8.2 2016/04/20 11:48:42 110 110 HDREDIT2 3.0.2 2016/04/20 12:06:03 ? ? $END $REMARKS -CLEAN functions: 2016/04/12 14:21:26 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 50.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.70 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 102.47 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2016/04/18 12:16:05 71 records were deleted in this editing session. 98 changes in channel Salinity:T0:C0 -CALIB parameters: 2016/04/20 11:34:33 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 12 Salinity:T0:C0 PSS-78 10 -0.2000000E-02 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2016/04/20 11:48:42 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -HEADER EDITS: 2016/04/20 12:06:03 Applied edit header: P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\CTD Data\2015-15\2015-15-0311.hex Software Version Seasave V 7.21d Temperature SN = 4752 Conductivity SN = 3396 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 16 2015 12:46:16 NMEA Latitude = 50 30.23 N NMEA Longitude = 128 19.59 W NMEA UTC (Time) = Jul 16 2015 19:43:07 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ship: W.E. Ricker 2015-15 Station: VI 25 Operator: HM Depth: 122 m System UTC = Jul 16 2015 19:46:16 # nquan = 14 # nvalues = 6598 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flSP: Fluorescence, Seapoint # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = flag: flag # span 0 = 1, 6598 # span 1 = 3.143, 112.466 # span 2 = 7.6739, 16.5034 # span 3 = 7.6751, 16.5047 # span 4 = 3.450836, 4.057743 # span 5 = 3.485621, 4.100802 # span 6 = 3.6630e-02, 4.8352e+00 # span 7 = 0.0000, 0.0000 # span 8 = 7.863, 8.217 # span 9 = -1.489, 1.606 # span 10 = 0, 1 # span 11 = 31.5606, 33.4333 # span 12 = 31.8834, 33.8080 # span 13 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 16 2015 19:43:07 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 4752 # 23-Jan-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35902423e-003 # 6.36413981e-004 # 2.06309769e-005 # 1.71365270e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3396 # 19-Dec-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -9.91941065e+000 # 1.31439274e+000 # 3.00845560e-005 # 6.13621985e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0585 # 30-Dec-13 # -3.951550e+004 # -4.415130e-001 # 1.282560e-002 # 3.560600e-002 # 0.000000e+000 # 3.030045e+001 # -4.415690e-004 # 4.342710e-006 # 1.736800e-009 # 0.99994600 # -2.11246 # 0.000000e+000 # 1.288270e-002 # -8.164490e+000 # # # # # # 2449 # 06-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35517974e-003 # 6.43485967e-004 # 2.33381062e-005 # 2.21338578e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2399 # 17-Jan-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.08277491e+001 # 1.61475240e+000 # 1.24520243e-003 # 1.93505039e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1119 # 21-Jan-14 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.4901e-001 # -0.5263 # -1.9196e-003 # 8.5361e-005 # -1.2856e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.0400 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

#
#
#
# # # # # # # 3685 # # # 2 # 0.000 # # # # # # # # # 0851 # Sept 4th 2014 # 4.6134 # 2.5497 # # # # # #
# datcnv_date = Aug 06 2015 12:15:56, 7.23.2 [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2015-15\RAW\CTD\2015-15-0311.hex P:\Crui se_Data_Processing\2015-15\Processing\doc\2015-15-ctd.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Nov 16 2015 17:18:22, 7.23.2 # wildedit_in = P:\Cruise_Data_Processing\2015-15\Processing\convert\2015-15-031 1.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # celltm_date = Nov 16 2015 17:21:37, 7.23.2 # celltm_in = P:\Cruise_Data_Processing\2015-15\Processing\wildedit\2015-15-0311 .cnv # celltm_alpha = 0.0245, 0.0245 # celltm_tau = 9.5000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Nov 16 2015 17:28:01, 7.23.2 [derive_vars = 2] # Derive_in = P:\Cruise_Data_Processing\2015-15\Processing\celltm\2015-15-0311.c nv P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-ctd.XMLCON # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove records corrupted by shed wakes; salinity was cleaned. ---------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Fluorescence and pH data are nominal and unedited except that some records were removed in editing temperature and salinity. Recalibration of channel Salinity:T0:C0 was based on a post-cruise calibration and a comparison with bottle samples. Stops for bottles were often very short and there was a cruise between this one and the post-cruise calibration, but the salinity is likely good to +/- 0.002. A dissolved oxygen sensor was mounted but no data were acquired. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were collected. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see the report: 2015-15_Processing_Report.doc. ---------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (-0.2E-02 1) $END !--1--- ---2---- ---3--- ---4--- ---5---- -6-- !Pressu Temperat Fluores pH:SBE: Salinity Numb !re ure: cence: Nominal :T0:C0 er_o ! Primary URU: ~bin ! Seapoin _rec ! t ords !------ -------- ------- ------- -------- ---- *END OF HEADER 3.4 16.4975 0.085 8.186 31.6442 23 3.8 16.4960 0.071 8.186 31.6440 26 5.0 16.4818 0.061 8.187 31.6440 33 6.0 16.4574 0.061 8.188 31.6436 27 7.0 16.4484 0.062 8.189 31.6432 27 8.0 16.4074 0.073 8.191 31.6426 27 9.0 16.3941 0.073 8.193 31.6422 27 10.0 16.3609 0.079 8.194 31.6409 24 11.0 16.2503 0.083 8.194 31.6380 23 12.0 16.0567 0.091 8.197 31.6269 21 13.0 15.9192 0.098 8.200 31.6227 21 14.0 15.8049 0.100 8.202 31.6151 22 15.0 15.5950 0.119 8.205 31.5990 24 16.0 15.2304 0.156 8.210 31.5972 31 17.0 14.4715 0.224 8.211 31.6137 38 18.0 14.2829 0.235 8.213 31.6137 31 19.0 14.0043 0.271 8.214 31.6235 26 20.0 13.6417 0.335 8.214 31.6332 23 21.0 13.4813 0.423 8.215 31.6381 20 22.0 13.3187 0.489 8.213 31.6457 19 23.0 12.9883 0.590 8.213 31.6692 20 24.0 12.7735 0.693 8.212 31.6895 22 25.0 12.5466 0.827 8.210 31.7122 30 26.0 12.3688 0.968 8.212 31.7344 42 27.0 11.9731 1.192 8.210 31.8197 31 28.0 11.5535 1.511 8.209 31.9097 24 29.0 11.5099 1.551 8.209 31.9206 21 30.0 11.4055 1.523 8.209 31.9397 21 31.0 11.2846 1.837 8.207 31.9543 22 32.0 11.0694 2.531 8.204 31.9720 24 33.0 10.7888 3.423 8.196 31.9989 25 34.0 10.5968 4.109 8.185 32.0179 22 35.0 10.5579 4.431 8.176 32.0221 23 36.0 10.5571 4.612 8.170 32.0235 25 37.0 10.5197 4.558 8.165 32.0306 30 38.0 10.3871 3.706 8.158 32.0523 37 39.0 10.3426 3.502 8.154 32.0640 27 40.0 10.3096 3.245 8.151 32.0713 19 41.0 10.2905 3.312 8.151 32.0810 17 42.0 10.2969 3.511 8.149 32.0900 17 43.0 10.3156 3.772 8.148 32.1014 19 44.0 10.2998 3.182 8.147 32.1242 25 45.0 10.3269 2.545 8.148 32.1711 35 46.0 10.3289 2.115 8.148 32.2002 30 47.0 10.1591 1.756 8.144 32.1893 27 48.0 10.1343 1.574 8.143 32.2042 26 49.0 10.2353 1.450 8.143 32.2340 24 50.0 10.3031 1.276 8.145 32.2657 22 51.0 10.2353 1.003 8.143 32.2952 23 52.0 10.1796 0.871 8.140 32.3123 23 53.0 10.1666 0.797 8.137 32.3169 23 54.0 10.0866 0.696 8.132 32.3310 21 55.0 9.9658 0.624 8.124 32.3459 23 56.0 9.8738 0.579 8.118 32.3608 24 57.0 9.8577 0.541 8.114 32.3649 31 58.0 9.8574 0.559 8.111 32.3690 28 59.0 9.8621 0.533 8.110 32.3875 25 60.0 9.8783 0.512 8.108 32.4350 24 61.0 9.8820 0.508 8.107 32.4459 31 62.0 9.8824 0.479 8.109 32.4513 23 63.0 9.9000 0.464 8.111 32.4778 18 64.0 9.9213 0.457 8.112 32.5144 18 65.0 9.8970 0.455 8.112 32.5357 20 66.0 9.7908 0.421 8.108 32.5743 26 67.0 9.6546 0.371 8.105 32.6163 28 68.0 9.5534 0.358 8.097 32.6604 25 69.0 9.5175 0.356 8.092 32.6844 26 70.1 9.3636 0.304 8.086 32.7283 45 70.9 9.2612 0.266 8.077 32.7559 32 72.0 9.2145 0.246 8.070 32.7756 19 73.0 9.1786 0.249 8.067 32.7915 15 74.0 9.1459 0.241 8.064 32.8043 16 75.0 9.1288 0.250 8.063 32.8141 16 76.0 9.1162 0.251 8.063 32.8247 21 77.0 9.0736 0.233 8.061 32.8502 33 78.0 9.0023 0.213 8.058 32.8776 34 79.0 8.9359 0.219 8.054 32.9013 27 80.0 8.8789 0.198 8.050 32.9310 27 81.0 8.8029 0.190 8.047 32.9636 29 82.0 8.7194 0.184 8.043 32.9930 28 83.0 8.6640 0.192 8.038 33.0109 23 84.0 8.5935 0.160 8.032 33.0359 19 85.0 8.5495 0.156 8.030 33.0530 18 86.0 8.5329 0.156 8.025 33.0587 19 87.0 8.5031 0.146 8.020 33.0696 25 88.0 8.4739 0.129 8.014 33.0807 41 89.1 8.4680 0.122 8.005 33.0831 25 90.0 8.4691 0.122 7.996 33.0835 25 91.0 8.4655 0.122 7.988 33.0854 22 92.0 8.4494 0.115 7.982 33.0914 20 93.0 8.4366 0.110 7.977 33.0960 20 94.0 8.4270 0.112 7.974 33.0995 18 95.0 8.4222 0.114 7.970 33.1010 19 96.0 8.4194 0.105 7.969 33.1021 21 97.0 8.4155 0.104 7.966 33.1040 27 98.0 8.3876 0.107 7.964 33.1142 31 99.0 8.3693 0.100 7.959 33.1230 40 100.0 8.3601 0.098 7.950 33.1292 28 101.0 8.3418 0.098 7.937 33.1392 22 102.0 8.3087 0.092 7.927 33.1559 18 103.0 8.2874 0.086 7.920 33.1666 16 104.0 8.2319 0.085 7.913 33.1910 17 105.0 8.1085 0.080 7.907 33.2406 18 106.0 8.0227 0.082 7.902 33.2750 21 107.1 7.9818 0.073 7.898 33.2923 31 108.0 7.9337 0.071 7.893 33.3078 43 109.0 7.8787 0.069 7.888 33.3287 26 110.0 7.8576 0.061 7.884 33.3397 24 111.0 7.7582 0.061 7.880 33.3885 28 112.2 7.6875 0.061 7.874 33.4240 59