*2016/04/20 12:06:02.87 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2015/07/16 13:04:51.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 77 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : CCCFFFB3 NUMBER OF CHANNELS : 6 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 4.135892 79.9942 2 Temperature:Primary 'deg C (ITS90)' 8.137609 15.57255 3 Fluorescence:URU:Seapoint mg/m^3 0.1267973 4.720125 4 pH:SBE:Nominal n/a 7.843419 8.179476 5 Salinity:T0:C0 PSS-78 31.95318 33.25492 6 Number_of_bin_records n/a 17 74 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2015-15\Pro $END *ADMINISTRATION MISSION : 2015-15 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Thiess M. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Juan de Fuca Strait / WCVI / Johnstone Strait STATION : VI 21 EVENT NUMBER : 299 LATITUDE : 50 20.04000 N ! (deg min) LONGITUDE : 128 5.06000 W ! (deg min) WATER DEPTH : 88 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------- -------------- ---------- Temperature ' ' 4752 Conductivity ' ' 3396 'Pressure:Digiquartz with TC' ' ' 0585 Temperature:2 ' ' 2449 Conductivity:2 ' ' 2399 'Oxygen:SBE 43' ' ' 1119 Fluorometer:Seapoint ' ' 3685 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.4.1 2016/04/12 14:20:43 5938 5938 CLEAN 5.2.1 2016/04/12 14:22:11 5938 5938 SHIFTDAT 3.4 2016/04/12 16:46:59 5938 5938 SHIFTDAT 3.4 2016/04/12 17:34:27 5938 5938 SHIFTDAT 3.4 2016/04/13 10:24:05 5938 5938 DELETE 6.3 2016/04/13 10:29:05 5938 2274 CTDEDIT 5.0.4 2016/04/18 11:48:19 2274 2178 CALIB 11.8.1 2016/04/20 11:34:30 2178 2178 FILTERS 4.3 2016/04/20 11:35:23 2178 2178 BINAVE 4.2 2016/04/20 11:48:32 2178 77 REMOVECH 8.2 2016/04/20 11:48:42 77 77 HDREDIT2 3.0.2 2016/04/20 12:06:02 ? ? $END $REMARKS -CLEAN functions: 2016/04/12 14:21:26 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 50.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.70 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 70.55 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2016/04/18 11:48:19 96 records were deleted in this editing session. 38 changes in channel Salinity:T0:C0 -CALIB parameters: 2016/04/20 11:34:30 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 12 Salinity:T0:C0 PSS-78 10 -0.2000000E-02 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2016/04/20 11:48:42 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -HEADER EDITS: 2016/04/20 12:06:02 Applied edit header: P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\CTD Data\2015-15\2015-15-0299.hex Software Version Seasave V 7.21d Temperature SN = 4752 Conductivity SN = 3396 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 16 2015 06:08:35 NMEA Latitude = 50 20.04 N NMEA Longitude = 128 05.06 W NMEA UTC (Time) = Jul 16 2015 13:04:51 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ship: W.E. Ricker 2015-15 Station: VI 21 Operator: HM Depth: 88 m System UTC = Jul 16 2015 13:08:35 # nquan = 14 # nvalues = 5938 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flSP: Fluorescence, Seapoint # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = flag: flag # span 0 = 1, 5938 # span 1 = 3.261, 80.547 # span 2 = 8.0976, 15.5813 # span 3 = 8.0962, 15.5821 # span 4 = 3.472251, 4.009040 # span 5 = 3.504019, 4.047595 # span 6 = 9.7680e-02, 5.0549e+00 # span 7 = 0.0000, 0.0000 # span 8 = 7.833, 8.183 # span 9 = -1.638, 1.577 # span 10 = 0, 1 # span 11 = 31.9002, 33.2743 # span 12 = 32.2182, 33.6133 # span 13 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 16 2015 13:04:51 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 4752 # 23-Jan-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35902423e-003 # 6.36413981e-004 # 2.06309769e-005 # 1.71365270e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3396 # 19-Dec-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -9.91941065e+000 # 1.31439274e+000 # 3.00845560e-005 # 6.13621985e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0585 # 30-Dec-13 # -3.951550e+004 # -4.415130e-001 # 1.282560e-002 # 3.560600e-002 # 0.000000e+000 # 3.030045e+001 # -4.415690e-004 # 4.342710e-006 # 1.736800e-009 # 0.99994600 # -2.11246 # 0.000000e+000 # 1.288270e-002 # -8.164490e+000 # # # # # # 2449 # 06-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35517974e-003 # 6.43485967e-004 # 2.33381062e-005 # 2.21338578e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2399 # 17-Jan-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.08277491e+001 # 1.61475240e+000 # 1.24520243e-003 # 1.93505039e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1119 # 21-Jan-14 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.4901e-001 # -0.5263 # -1.9196e-003 # 8.5361e-005 # -1.2856e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.0400 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

#
#
#
# # # # # # # 3685 # # # 2 # 0.000 # # # # # # # # # 0851 # Sept 4th 2014 # 4.6134 # 2.5497 # # # # # #
# datcnv_date = Aug 06 2015 12:15:53, 7.23.2 [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2015-15\RAW\CTD\2015-15-0299.hex P:\Crui se_Data_Processing\2015-15\Processing\doc\2015-15-ctd.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Nov 16 2015 17:18:21, 7.23.2 # wildedit_in = P:\Cruise_Data_Processing\2015-15\Processing\convert\2015-15-029 9.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # celltm_date = Nov 16 2015 17:21:36, 7.23.2 # celltm_in = P:\Cruise_Data_Processing\2015-15\Processing\wildedit\2015-15-0299 .cnv # celltm_alpha = 0.0245, 0.0245 # celltm_tau = 9.5000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Nov 16 2015 17:27:59, 7.23.2 [derive_vars = 2] # Derive_in = P:\Cruise_Data_Processing\2015-15\Processing\celltm\2015-15-0299.c nv P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-ctd.XMLCON # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove records corrupted by shed wakes; salinity was cleaned. ---------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Fluorescence and pH data are nominal and unedited except that some records were removed in editing temperature and salinity. Recalibration of channel Salinity:T0:C0 was based on a post-cruise calibration and a comparison with bottle samples. Stops for bottles were often very short and there was a cruise between this one and the post-cruise calibration, but the salinity is likely good to +/- 0.002. A dissolved oxygen sensor was mounted but no data were acquired. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were collected. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see the report: 2015-15_Processing_Report.doc. ---------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (-0.2E-02 1) $END !--1--- ---2---- ---3--- ---4--- ---5---- -6-- !Pressu Temperat Fluores pH:SBE: Salinity Numb !re ure: cence: Nominal :T0:C0 er_o ! Primary URU: ~bin ! Seapoin _rec ! t ords !------ -------- ------- ------- -------- ---- *END OF HEADER 4.1 15.5718 0.619 8.155 31.9532 37 4.9 15.5686 0.638 8.157 31.9533 69 6.0 15.5687 0.615 8.159 31.9535 62 6.9 15.5725 0.627 8.159 31.9532 53 8.0 15.5658 0.608 8.159 31.9534 30 9.0 15.5289 0.650 8.160 31.9541 30 10.0 15.3867 0.702 8.163 31.9577 33 11.0 15.1858 0.729 8.167 31.9632 34 12.0 14.5319 0.844 8.168 31.9850 27 13.0 14.1709 0.798 8.167 32.0017 26 14.0 13.9766 0.616 8.168 32.0310 22 15.0 13.5683 0.602 8.169 32.0349 21 16.0 13.3206 0.676 8.171 32.0295 20 17.0 12.8945 0.970 8.172 32.0109 25 18.0 12.4714 1.335 8.172 31.9987 35 19.0 12.1810 1.434 8.174 31.9939 29 20.0 11.6436 1.511 8.178 31.9859 22 21.0 11.4103 2.068 8.179 32.0033 21 22.0 11.0684 3.648 8.176 32.0433 23 23.0 10.7605 4.461 8.169 32.0954 24 24.0 10.7310 4.720 8.160 32.1464 24 25.0 10.5567 4.507 8.148 32.1544 22 26.0 10.4253 3.625 8.139 32.1922 24 27.0 10.4687 2.802 8.134 32.2561 34 28.0 10.5045 2.279 8.135 32.2990 31 29.0 10.5000 2.062 8.137 32.3164 23 30.0 10.5010 1.921 8.139 32.3321 20 31.0 10.5604 1.797 8.142 32.3701 20 32.0 10.5872 1.765 8.146 32.3970 23 33.0 10.5732 1.454 8.147 32.4216 24 34.0 10.5277 1.366 8.147 32.4340 24 35.0 10.4473 1.277 8.143 32.4448 26 36.0 10.3964 1.177 8.140 32.4611 26 37.0 10.3361 1.071 8.136 32.4817 28 38.0 10.2390 0.978 8.130 32.5068 26 39.0 10.1670 0.899 8.121 32.5200 22 40.0 10.0116 0.798 8.109 32.5531 21 41.0 9.8482 0.706 8.100 32.5806 22 42.0 9.7909 0.606 8.094 32.5871 24 43.0 9.7347 0.518 8.089 32.5929 27 44.0 9.6466 0.446 8.082 32.6158 28 45.0 9.5970 0.401 8.076 32.6368 23 46.0 9.5914 0.380 8.073 32.6403 21 47.0 9.5835 0.366 8.070 32.6453 20 48.0 9.5701 0.360 8.066 32.6539 25 49.0 9.5522 0.354 8.066 32.6626 38 50.0 9.5144 0.344 8.063 32.6727 31 51.0 9.3926 0.305 8.055 32.6971 24 52.0 9.2726 0.278 8.046 32.7246 20 53.0 9.2211 0.277 8.036 32.7432 23 54.0 9.2225 0.296 8.028 32.7503 21 55.0 9.2321 0.341 8.017 32.7702 22 56.0 9.2301 0.387 8.008 32.7964 26 57.0 9.2222 0.497 7.997 32.8176 41 58.0 9.2125 0.486 7.984 32.8270 28 59.0 9.1998 0.505 7.974 32.8348 20 60.0 9.1772 0.499 7.966 32.8506 18 61.0 9.0946 0.447 7.957 32.8908 24 62.0 9.0318 0.430 7.950 32.9106 42 63.0 8.9244 0.351 7.934 32.9479 26 64.0 8.7927 0.291 7.923 33.0087 20 65.0 8.7494 0.248 7.916 33.0218 21 66.0 8.7008 0.245 7.909 33.0437 28 67.0 8.6891 0.229 7.904 33.0491 30 68.0 8.6835 0.217 7.898 33.0534 22 69.0 8.6676 0.212 7.892 33.0602 23 70.0 8.5750 0.227 7.885 33.0973 40 71.0 8.5403 0.192 7.878 33.1099 24 72.0 8.5125 0.195 7.874 33.1197 17 73.1 8.4982 0.167 7.872 33.1261 22 74.0 8.4490 0.160 7.868 33.1437 29 74.9 8.3946 0.150 7.859 33.1636 58 76.0 8.3671 0.160 7.857 33.1737 29 77.0 8.3462 0.157 7.857 33.1805 22 78.0 8.3376 0.145 7.857 33.1830 20 79.1 8.3050 0.139 7.857 33.1937 29 80.0 8.1376 0.127 7.843 33.2549 74