*2016/04/20 12:06:02.63 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2015/07/15 17:42:46.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 96 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : E5949E93 NUMBER OF CHANNELS : 6 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 4.911939 99.75546 2 Temperature:Primary 'deg C (ITS90)' 7.314754 14.34283 3 Fluorescence:URU:Seapoint mg/m^3 0.49E-01 7.706217 4 pH:SBE:Nominal n/a 7.803364 8.276444 5 Salinity:T0:C0 PSS-78 31.97059 33.61327 6 Number_of_bin_records n/a 11 49 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2015-15\Pro $END *ADMINISTRATION MISSION : 2015-15 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Thiess M. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Juan de Fuca Strait / WCVI / Johnstone Strait STATION : VI 17 EVENT NUMBER : 287 LATITUDE : 49 57.10000 N ! (deg min) LONGITUDE : 127 40.88000 W ! (deg min) WATER DEPTH : 116 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------- -------------- ---------- Temperature ' ' 4752 Conductivity ' ' 3396 'Pressure:Digiquartz with TC' ' ' 0585 Temperature:2 ' ' 2449 Conductivity:2 ' ' 2399 'Oxygen:SBE 43' ' ' 1119 Fluorometer:Seapoint ' ' 3685 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.4.1 2016/04/12 14:20:36 7445 7445 CLEAN 5.2.1 2016/04/12 14:22:05 7445 7445 SHIFTDAT 3.4 2016/04/12 16:46:53 7445 7445 SHIFTDAT 3.4 2016/04/12 17:34:19 7445 7445 SHIFTDAT 3.4 2016/04/13 10:23:59 7445 7445 DELETE 6.3 2016/04/13 10:28:58 7445 2898 CTDEDIT 5.0.4 2016/04/18 11:13:52 2898 2550 CALIB 11.8.1 2016/04/20 11:34:27 2550 2550 FILTERS 4.3 2016/04/20 11:35:21 2550 2550 BINAVE 4.2 2016/04/20 11:48:30 2550 96 REMOVECH 8.2 2016/04/20 11:48:42 96 96 HDREDIT2 3.0.2 2016/04/20 12:06:02 ? ? $END $REMARKS -CLEAN functions: 2016/04/12 14:21:26 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 50.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.70 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 96.58 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2016/04/18 11:13:52 348 records were deleted in this editing session. 23 changes in channel Salinity:T0:C0 -CALIB parameters: 2016/04/20 11:34:27 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 12 Salinity:T0:C0 PSS-78 10 -0.2000000E-02 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2016/04/20 11:48:42 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -HEADER EDITS: 2016/04/20 12:06:02 Applied edit header: P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\CTD Data\2015-15\2015-15-0287.hex Software Version Seasave V 7.21d Temperature SN = 4752 Conductivity SN = 3396 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 15 2015 10:45:52 NMEA Latitude = 49 57.10 N NMEA Longitude = 127 40.88 W NMEA UTC (Time) = Jul 15 2015 17:42:46 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ship: W.E. Ricker 2015-15 Station: VI 17 Operator: HM Depth: 116 m System UTC = Jul 15 2015 17:45:52 # nquan = 14 # nvalues = 7445 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flSP: Fluorescence, Seapoint # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = flag: flag # span 0 = 1, 7445 # span 1 = 3.443, 106.584 # span 2 = 7.2781, 14.3498 # span 3 = 7.2575, 14.3494 # span 4 = 3.432279, 3.899045 # span 5 = 3.469319, 3.940486 # span 6 = 2.4420e-02, 9.0965e+00 # span 7 = 0.0000, 0.0000 # span 8 = 7.764, 8.279 # span 9 = -1.378, 1.350 # span 10 = 0, 1 # span 11 = 31.2397, 33.6538 # span 12 = 32.3511, 34.0546 # span 13 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 15 2015 17:42:46 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 4752 # 23-Jan-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35902423e-003 # 6.36413981e-004 # 2.06309769e-005 # 1.71365270e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3396 # 19-Dec-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -9.91941065e+000 # 1.31439274e+000 # 3.00845560e-005 # 6.13621985e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0585 # 30-Dec-13 # -3.951550e+004 # -4.415130e-001 # 1.282560e-002 # 3.560600e-002 # 0.000000e+000 # 3.030045e+001 # -4.415690e-004 # 4.342710e-006 # 1.736800e-009 # 0.99994600 # -2.11246 # 0.000000e+000 # 1.288270e-002 # -8.164490e+000 # # # # # # 2449 # 06-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35517974e-003 # 6.43485967e-004 # 2.33381062e-005 # 2.21338578e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2399 # 17-Jan-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.08277491e+001 # 1.61475240e+000 # 1.24520243e-003 # 1.93505039e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1119 # 21-Jan-14 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.4901e-001 # -0.5263 # -1.9196e-003 # 8.5361e-005 # -1.2856e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.0400 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

#
#
#
# # # # # # # 3685 # # # 2 # 0.000 # # # # # # # # # 0851 # Sept 4th 2014 # 4.6134 # 2.5497 # # # # # #
# datcnv_date = Aug 06 2015 12:15:49, 7.23.2 [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2015-15\RAW\CTD\2015-15-0287.hex P:\Crui se_Data_Processing\2015-15\Processing\doc\2015-15-ctd.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Nov 16 2015 17:18:19, 7.23.2 # wildedit_in = P:\Cruise_Data_Processing\2015-15\Processing\convert\2015-15-028 7.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # celltm_date = Nov 16 2015 17:21:34, 7.23.2 # celltm_in = P:\Cruise_Data_Processing\2015-15\Processing\wildedit\2015-15-0287 .cnv # celltm_alpha = 0.0245, 0.0245 # celltm_tau = 9.5000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Nov 16 2015 17:27:57, 7.23.2 [derive_vars = 2] # Derive_in = P:\Cruise_Data_Processing\2015-15\Processing\celltm\2015-15-0287.c nv P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-ctd.XMLCON # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some near-surface records and salinity was cleaned. All records below 100db were removed due to a malfunction in the CTD, likely due to a clogged intake to the primary channels. Data from the whole upcast were also affected. ---------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Fluorescence and pH data are nominal and unedited except that some records were removed in editing temperature and salinity. Recalibration of channel Salinity:T0:C0 was based on a post-cruise calibration and a comparison with bottle samples. Stops for bottles were often very short and there was a cruise between this one and the post-cruise calibration, but the salinity is likely good to +/- 0.002. A dissolved oxygen sensor was mounted but no data were acquired. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were collected. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see the report: 2015-15_Processing_Report.doc. ---------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (-0.2E-02 1) $END !--1--- ---2---- ---3--- ---4--- ---5---- -6-- !Pressu Temperat Fluores pH:SBE: Salinity Numb !re ure: cence: Nominal :T0:C0 er_o ! Primary URU: ~bin ! Seapoin _rec ! t ords !------ -------- ------- ------- -------- ---- *END OF HEADER 4.9 14.3428 1.085 8.274 31.9720 49 6.0 14.3415 1.071 8.276 31.9706 25 7.0 14.2785 1.358 8.276 31.9837 27 8.0 14.0262 2.565 8.266 32.0635 27 9.0 13.4681 4.060 8.250 32.1885 26 10.0 13.2381 4.468 8.239 32.2114 23 11.0 12.9597 5.864 8.225 32.2184 22 12.0 12.4981 7.019 8.205 32.2271 22 13.0 12.0985 7.023 8.176 32.2438 23 14.0 11.9607 7.706 8.147 32.2463 23 15.0 11.5724 6.732 8.116 32.2809 25 16.0 11.4430 6.376 8.093 32.3057 26 17.0 11.1380 5.342 8.081 32.3509 28 18.0 11.1213 4.579 8.073 32.3662 29 19.0 11.0839 4.118 8.069 32.3940 27 20.0 10.9938 3.518 8.065 32.3985 25 21.0 10.9542 3.341 8.059 32.4099 24 22.0 10.9523 3.192 8.049 32.4239 26 23.0 10.9272 3.187 8.041 32.4302 32 24.0 10.9136 2.854 8.036 32.4317 27 25.0 10.9093 2.976 8.032 32.4328 21 26.0 10.9059 3.019 8.030 32.4359 23 27.0 10.8932 2.985 8.027 32.4435 25 28.0 10.8682 3.041 8.023 32.4532 29 29.0 10.7824 2.701 8.019 32.4706 28 30.0 10.7067 2.340 8.021 32.4837 26 31.0 10.6545 2.054 8.029 32.4834 23 32.0 10.6280 1.973 8.034 32.4826 25 33.0 10.6180 1.976 8.039 32.4820 27 34.0 10.5962 1.822 8.043 32.4830 30 35.0 10.5452 1.784 8.046 32.4902 26 36.0 10.4744 1.610 8.048 32.5007 25 37.0 10.4376 1.627 8.046 32.5180 24 38.0 10.3880 1.733 8.038 32.5337 23 39.0 10.2223 1.582 8.027 32.5764 24 40.0 10.0985 1.497 8.013 32.6060 26 41.0 9.9041 1.089 8.007 32.6502 31 42.0 9.7869 0.833 8.004 32.6709 29 43.0 9.6222 0.652 8.001 32.7144 25 44.0 9.5510 0.529 7.995 32.7311 22 45.0 9.4603 0.445 7.990 32.7513 24 46.0 9.3998 0.397 7.984 32.7665 27 47.0 9.3482 0.405 7.979 32.7776 27 48.0 9.2856 0.303 7.973 32.7940 22 49.0 9.2492 0.237 7.969 32.8079 24 50.0 9.2255 0.210 7.964 32.8141 29 51.0 9.1861 0.236 7.960 32.8245 37 52.0 9.1108 0.178 7.952 32.8446 28 53.0 9.0242 0.136 7.943 32.8629 22 54.0 8.8819 0.115 7.932 32.9037 22 55.0 8.7487 0.096 7.923 32.9432 22 56.0 8.7095 0.078 7.916 32.9554 29 57.1 8.6725 0.073 7.912 32.9676 26 58.0 8.6461 0.070 7.908 32.9775 34 59.0 8.6420 0.065 7.908 32.9806 28 60.0 8.6298 0.061 7.904 32.9845 27 61.0 8.6083 0.064 7.902 32.9905 28 62.0 8.5711 0.061 7.897 33.0018 31 63.0 8.5186 0.061 7.890 33.0175 29 64.0 8.4776 0.070 7.883 33.0335 25 65.0 8.4594 0.063 7.880 33.0415 23 66.0 8.4581 0.071 7.876 33.0422 24 67.0 8.4567 0.061 7.874 33.0428 28 68.0 8.4406 0.061 7.871 33.0481 36 69.0 8.4193 0.061 7.869 33.0557 35 70.0 8.4091 0.061 7.864 33.0586 26 71.0 8.3959 0.058 7.858 33.0624 23 72.0 8.3747 0.061 7.852 33.0675 27 73.0 8.3583 0.061 7.848 33.0736 37 74.0 8.3372 0.078 7.844 33.0839 29 75.0 8.2941 0.063 7.842 33.1008 24 76.0 8.2642 0.066 7.839 33.1155 27 77.0 8.2268 0.058 7.838 33.1317 32 78.0 8.2058 0.057 7.836 33.1422 29 79.0 8.1949 0.052 7.834 33.1467 27 80.0 8.1867 0.061 7.834 33.1495 28 81.0 8.1383 0.057 7.831 33.1698 28 82.0 8.0196 0.051 7.831 33.2224 28 83.0 7.9191 0.049 7.834 33.2700 28 84.0 7.8590 0.049 7.835 33.2939 28 85.0 7.8196 0.049 7.839 33.3085 27 86.0 7.7832 0.049 7.843 33.3211 23 87.0 7.7625 0.049 7.847 33.3279 22 88.0 7.7449 0.050 7.849 33.3343 22 89.0 7.7355 0.049 7.850 33.3380 32 90.0 7.6577 0.049 7.852 33.3629 35 91.0 7.5579 0.049 7.850 33.3966 22 92.0 7.5111 0.049 7.847 33.4202 18 93.0 7.4949 0.049 7.845 33.4348 19 94.0 7.4900 0.051 7.842 33.4403 24 95.0 7.4580 0.049 7.840 33.4756 31 96.0 7.4269 0.049 7.833 33.5092 32 97.0 7.4137 0.051 7.825 33.5255 25 98.0 7.3504 0.050 7.814 33.5853 23 99.0 7.3211 0.056 7.807 33.6072 22 99.8 7.3148 0.061 7.803 33.6133 11