*2016/04/20 12:06:02.27 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2015/07/14 19:09:00.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 99 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 35874CAF NUMBER OF CHANNELS : 6 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 3.252167 100.5292 2 Temperature:Primary 'deg C (ITS90)' 7.27808 14.04177 3 Fluorescence:URU:Seapoint mg/m^3 0.49E-01 11.3321 4 pH:SBE:Nominal n/a 7.613 8.35464 5 Salinity:T0:C0 PSS-78 31.52212 33.5756 6 Number_of_bin_records n/a 10 87 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2015-15\Pro $END *ADMINISTRATION MISSION : 2015-15 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Thiess M. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Juan de Fuca Strait / WCVI / Johnstone Strait STATION : VI 10 EVENT NUMBER : 266 LATITUDE : 49 22.82000 N ! (deg min) LONGITUDE : 126 48.99000 W ! (deg min) WATER DEPTH : 113 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------- -------------- ---------- Temperature ' ' 4752 Conductivity ' ' 3396 'Pressure:Digiquartz with TC' ' ' 0585 Temperature:2 ' ' 2449 Conductivity:2 ' ' 2399 'Oxygen:SBE 43' ' ' 1119 Fluorometer:Seapoint ' ' 3685 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.4.1 2016/04/12 14:20:28 5967 5967 CLEAN 5.2.1 2016/04/12 14:21:56 5967 5967 SHIFTDAT 3.4 2016/04/12 16:46:43 5967 5967 SHIFTDAT 3.4 2016/04/12 17:34:11 5967 5967 SHIFTDAT 3.4 2016/04/13 10:23:51 5967 5967 DELETE 6.3 2016/04/13 10:28:52 5967 2519 CTDEDIT 5.0.4 2016/04/18 10:13:35 2519 2499 CALIB 11.8.1 2016/04/20 11:34:23 2499 2499 FILTERS 4.3 2016/04/20 11:35:18 2499 2499 BINAVE 4.2 2016/04/20 11:48:29 2499 99 REMOVECH 8.2 2016/04/20 11:48:41 99 99 HDREDIT2 3.0.2 2016/04/20 12:06:02 ? ? $END $REMARKS -CLEAN functions: 2016/04/12 14:21:26 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 50.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.70 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 90.74 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2016/04/18 10:13:35 20 records were deleted in this editing session. 65 changes in channel Salinity:T0:C0 -CALIB parameters: 2016/04/20 11:34:23 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 12 Salinity:T0:C0 PSS-78 10 -0.2000000E-02 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2016/04/20 11:48:41 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -HEADER EDITS: 2016/04/20 12:06:02 Applied edit header: P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\CTD Data\2015-15\2015-15-0266.hex Software Version Seasave V 7.21d Temperature SN = 4752 Conductivity SN = 3396 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 14 2015 12:12:08 NMEA Latitude = 49 22.82 N NMEA Longitude = 126 48.99 W NMEA UTC (Time) = Jul 14 2015 19:09:00 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ship: W.E. Ricker 2015-15 Station: VI 10 Operator: HM Depth: 113 m System UTC = Jul 14 2015 19:12:08 # nquan = 14 # nvalues = 5967 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flSP: Fluorescence, Seapoint # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = flag: flag # span 0 = 1, 5967 # span 1 = 3.118, 100.736 # span 2 = 7.2776, 14.1967 # span 3 = 7.2776, 14.1994 # span 4 = 3.428000, 3.846369 # span 5 = 3.468566, 3.890491 # span 6 = 3.6630e-02, 1.3040e+01 # span 7 = 0.0000, 0.0000 # span 8 = 7.608, 8.356 # span 9 = -1.435, 1.697 # span 10 = 0, 1 # span 11 = 31.4779, 33.5783 # span 12 = 31.8849, 34.0169 # span 13 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 14 2015 19:09:00 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 4752 # 23-Jan-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35902423e-003 # 6.36413981e-004 # 2.06309769e-005 # 1.71365270e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3396 # 19-Dec-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -9.91941065e+000 # 1.31439274e+000 # 3.00845560e-005 # 6.13621985e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0585 # 30-Dec-13 # -3.951550e+004 # -4.415130e-001 # 1.282560e-002 # 3.560600e-002 # 0.000000e+000 # 3.030045e+001 # -4.415690e-004 # 4.342710e-006 # 1.736800e-009 # 0.99994600 # -2.11246 # 0.000000e+000 # 1.288270e-002 # -8.164490e+000 # # # # # # 2449 # 06-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35517974e-003 # 6.43485967e-004 # 2.33381062e-005 # 2.21338578e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2399 # 17-Jan-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.08277491e+001 # 1.61475240e+000 # 1.24520243e-003 # 1.93505039e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1119 # 21-Jan-14 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.4901e-001 # -0.5263 # -1.9196e-003 # 8.5361e-005 # -1.2856e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.0400 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

#
#
#
# # # # # # # 3685 # # # 2 # 0.000 # # # # # # # # # 0851 # Sept 4th 2014 # 4.6134 # 2.5497 # # # # # #
# datcnv_date = Aug 06 2015 12:15:43, 7.23.2 [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2015-15\RAW\CTD\2015-15-0266.hex P:\Crui se_Data_Processing\2015-15\Processing\doc\2015-15-ctd.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Nov 16 2015 17:18:17, 7.23.2 # wildedit_in = P:\Cruise_Data_Processing\2015-15\Processing\convert\2015-15-026 6.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # celltm_date = Nov 16 2015 17:21:32, 7.23.2 # celltm_in = P:\Cruise_Data_Processing\2015-15\Processing\wildedit\2015-15-0266 .cnv # celltm_alpha = 0.0245, 0.0245 # celltm_tau = 9.5000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Nov 16 2015 17:27:54, 7.23.2 [derive_vars = 2] # Derive_in = P:\Cruise_Data_Processing\2015-15\Processing\celltm\2015-15-0266.c nv P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-ctd.XMLCON # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove a few records corrupted by shed wakes; salinity was cleaned. ---------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Fluorescence and pH data are nominal and unedited except that some records were removed in editing temperature and salinity. Recalibration of channel Salinity:T0:C0 was based on a post-cruise calibration and a comparison with bottle samples. Stops for bottles were often very short and there was a cruise between this one and the post-cruise calibration, but the salinity is likely good to +/- 0.002. A dissolved oxygen sensor was mounted but no data were acquired. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were collected. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see the report: 2015-15_Processing_Report.doc. ---------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (-0.2E-02 1) $END !--1--- ---2---- ---3--- ---4--- ---5---- -6-- !Pressu Temperat Fluores pH:SBE: Salinity Numb !re ure: cence: Nominal :T0:C0 er_o ! Primary URU: ~bin ! Seapoin _rec ! t ords !------ -------- ------- ------- -------- ---- *END OF HEADER 3.3 14.0418 2.243 8.351 31.5531 32 3.8 14.0411 2.194 8.351 31.5508 61 5.0 14.0406 1.922 8.351 31.5510 21 6.0 14.0138 2.505 8.351 31.5478 25 7.0 13.9179 3.492 8.352 31.5356 30 8.0 13.9134 4.129 8.352 31.5339 28 9.0 13.8035 5.080 8.355 31.5231 25 10.0 13.6509 5.526 8.352 31.5221 23 11.0 13.2540 7.688 8.347 31.5525 22 12.0 13.1892 9.301 8.342 31.5720 22 13.0 13.1983 11.117 8.339 31.6258 21 14.0 12.9466 11.272 8.330 31.6833 23 15.0 12.4414 11.332 8.306 31.7207 21 16.0 11.5587 9.559 8.256 31.7718 21 17.0 10.6077 7.824 8.201 31.7142 23 18.0 10.3641 5.763 8.156 31.7310 28 19.0 10.3281 3.421 8.098 31.7917 27 20.0 10.2629 2.447 8.052 31.8202 25 21.0 10.1940 1.870 8.022 31.8258 26 22.0 10.2767 1.506 8.017 31.8695 26 23.0 10.6679 2.024 8.030 32.0019 25 24.0 10.6735 1.891 8.034 32.0492 23 25.0 10.5923 1.485 8.032 32.0472 20 26.0 10.5624 1.149 8.029 32.0447 18 27.0 10.5515 1.215 8.026 32.0489 20 28.0 10.5183 1.765 8.024 32.0732 21 29.0 10.5059 1.150 8.026 32.1842 21 30.0 10.6423 1.174 8.026 32.2703 23 31.0 10.3280 0.774 8.012 32.2610 33 32.0 9.5777 0.415 7.981 32.1903 43 33.0 9.3225 0.233 7.914 32.2197 23 34.0 9.2736 0.221 7.881 32.2773 18 35.0 9.2722 0.191 7.865 32.3232 17 36.0 9.2044 0.217 7.855 32.3514 17 37.0 9.1924 0.201 7.847 32.3787 19 38.0 9.1765 0.168 7.838 32.4184 17 39.0 9.1189 0.222 7.830 32.4630 22 40.0 9.0896 0.155 7.822 32.4812 22 41.0 9.0031 0.131 7.813 32.5140 26 42.0 8.9516 0.139 7.806 32.5456 32 43.0 8.9204 0.102 7.798 32.5557 29 44.0 8.8596 0.095 7.785 32.5653 24 45.0 8.7866 0.088 7.775 32.5809 22 46.0 8.7848 0.116 7.770 32.5844 22 47.0 8.8105 0.090 7.772 32.6024 19 48.0 8.8199 0.110 7.774 32.6344 18 49.0 8.7831 0.104 7.772 32.6563 18 50.0 8.7128 0.099 7.771 32.6688 21 51.0 8.6787 0.095 7.770 32.6786 31 52.0 8.6410 0.086 7.765 32.7003 37 53.0 8.5923 0.090 7.756 32.7193 24 54.0 8.5576 0.112 7.750 32.7376 21 55.0 8.5234 0.085 7.747 32.7498 19 56.0 8.5187 0.109 7.743 32.7543 19 57.0 8.4827 0.097 7.740 32.7721 20 58.0 8.3994 0.078 7.737 32.8128 24 59.0 8.3573 0.069 7.734 32.8346 32 60.0 8.3191 0.059 7.730 32.8562 30 61.0 8.2887 0.073 7.729 32.8801 25 62.0 8.2721 0.065 7.728 32.8953 23 63.0 8.2556 0.072 7.726 32.9079 23 64.0 8.2171 0.072 7.723 32.9308 24 65.0 8.1316 0.063 7.720 32.9884 20 66.0 8.0770 0.072 7.717 33.0216 19 67.0 8.0495 0.061 7.715 33.0371 20 68.0 8.0200 0.061 7.714 33.0546 24 69.0 7.9958 0.061 7.712 33.0698 31 70.0 7.9748 0.066 7.709 33.0832 33 71.0 7.9426 0.061 7.710 33.1073 26 72.0 7.8936 0.061 7.711 33.1505 21 73.0 7.8867 0.058 7.712 33.1581 20 74.0 7.8858 0.049 7.712 33.1594 20 75.0 7.8843 0.049 7.713 33.1614 24 76.0 7.8807 0.054 7.716 33.1675 32 77.0 7.8762 0.052 7.721 33.1760 29 78.0 7.8702 0.056 7.730 33.1934 18 79.0 7.8608 0.049 7.740 33.2278 16 80.0 7.8584 0.049 7.746 33.2463 17 81.0 7.8459 0.049 7.744 33.2636 20 82.1 7.7680 0.054 7.747 33.2924 36 83.0 7.7578 0.050 7.752 33.3147 50 84.0 7.7411 0.057 7.755 33.3223 35 85.0 7.7282 0.049 7.747 33.3360 22 86.0 7.6871 0.050 7.726 33.3498 16 87.0 7.5870 0.277 7.710 33.3835 15 88.0 7.5028 0.120 7.698 33.4166 14 89.0 7.4746 0.094 7.688 33.4322 18 90.0 7.4585 0.073 7.679 33.4393 27 91.0 7.4288 0.073 7.665 33.4572 36 92.0 7.3955 0.063 7.654 33.4793 30 93.0 7.3892 0.061 7.648 33.4841 26 94.0 7.3794 0.061 7.645 33.4917 26 95.0 7.3679 0.067 7.638 33.5000 30 96.0 7.3451 0.062 7.635 33.5165 25 97.0 7.3290 0.065 7.631 33.5295 20 98.0 7.3192 0.061 7.627 33.5373 23 99.0 7.2943 0.064 7.625 33.5586 37 100.0 7.2818 0.101 7.617 33.5725 87 100.5 7.2781 0.121 7.613 33.5756 10