*2016/04/20 12:06:02.21 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2015/07/14 17:11:13.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 119 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 1A11884C NUMBER OF CHANNELS : 6 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 3.38055 120.9311 2 Temperature:Primary 'deg C (ITS90)' 6.813803 12.44559 3 Fluorescence:URU:Seapoint mg/m^3 0.49E-01 10.0353 4 pH:SBE:Nominal n/a 7.556531 8.220799 5 Salinity:T0:C0 PSS-78 31.88007 33.83781 6 Number_of_bin_records n/a 19 59 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2015-15\Pro $END *ADMINISTRATION MISSION : 2015-15 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Thiess M. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Juan de Fuca Strait / WCVI / Johnstone Strait STATION : EP 04 EVENT NUMBER : 263 LATITUDE : 49 13.76000 N ! (deg min) LONGITUDE : 126 46.65000 W ! (deg min) WATER DEPTH : 120 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------- -------------- ---------- Temperature ' ' 4752 Conductivity ' ' 3396 'Pressure:Digiquartz with TC' ' ' 0585 Temperature:2 ' ' 2449 Conductivity:2 ' ' 2399 'Oxygen:SBE 43' ' ' 1119 Fluorometer:Seapoint ' ' 3685 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.4.1 2016/04/12 14:20:26 7907 7907 CLEAN 5.2.1 2016/04/12 14:21:54 7907 7907 SHIFTDAT 3.4 2016/04/12 16:46:41 7907 7907 SHIFTDAT 3.4 2016/04/12 17:34:09 7907 7907 SHIFTDAT 3.4 2016/04/13 10:23:49 7907 7907 DELETE 6.3 2016/04/13 10:28:51 7907 3459 CTDEDIT 5.0.4 2016/04/18 10:00:20 3459 3403 CALIB 11.8.1 2016/04/20 11:34:22 3403 3403 FILTERS 4.3 2016/04/20 11:35:17 3403 3403 BINAVE 4.2 2016/04/20 11:48:28 3403 119 REMOVECH 8.2 2016/04/20 11:48:41 119 119 HDREDIT2 3.0.2 2016/04/20 12:06:02 ? ? $END $REMARKS -CLEAN functions: 2016/04/12 14:21:26 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 50.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.70 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 111.44 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2016/04/18 10:00:20 56 records were deleted in this editing session. 35 changes in channel Salinity:T0:C0 -CALIB parameters: 2016/04/20 11:34:22 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 12 Salinity:T0:C0 PSS-78 10 -0.2000000E-02 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2016/04/20 11:48:41 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -HEADER EDITS: 2016/04/20 12:06:02 Applied edit header: P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\CTD Data\2015-15\2015-15-0263.hex Software Version Seasave V 7.21d Temperature SN = 4752 Conductivity SN = 3396 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 14 2015 10:14:31 NMEA Latitude = 49 13.76 N NMEA Longitude = 126 46.65 W NMEA UTC (Time) = Jul 14 2015 17:11:13 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ship: W.E. Ricker 2015-15 Station: EP 04 Operator: HM Depth: 120 m System UTC = Jul 14 2015 17:14:31 # nquan = 14 # nvalues = 7907 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flSP: Fluorescence, Seapoint # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = flag: flag # span 0 = 1, 7907 # span 1 = 3.200, 121.437 # span 2 = 6.8113, 13.1965 # span 3 = 6.8138, 13.1494 # span 4 = 3.411600, 3.769562 # span 5 = 3.448091, 3.806854 # span 6 = 2.4420e-02, 1.5055e+01 # span 7 = 0.0000, 0.0000 # span 8 = 7.533, 8.235 # span 9 = -1.558, 1.287 # span 10 = 0, 1 # span 11 = 31.7174, 33.8457 # span 12 = 32.0709, 34.2423 # span 13 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 14 2015 17:11:13 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 4752 # 23-Jan-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35902423e-003 # 6.36413981e-004 # 2.06309769e-005 # 1.71365270e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3396 # 19-Dec-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -9.91941065e+000 # 1.31439274e+000 # 3.00845560e-005 # 6.13621985e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0585 # 30-Dec-13 # -3.951550e+004 # -4.415130e-001 # 1.282560e-002 # 3.560600e-002 # 0.000000e+000 # 3.030045e+001 # -4.415690e-004 # 4.342710e-006 # 1.736800e-009 # 0.99994600 # -2.11246 # 0.000000e+000 # 1.288270e-002 # -8.164490e+000 # # # # # # 2449 # 06-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35517974e-003 # 6.43485967e-004 # 2.33381062e-005 # 2.21338578e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2399 # 17-Jan-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.08277491e+001 # 1.61475240e+000 # 1.24520243e-003 # 1.93505039e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1119 # 21-Jan-14 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.4901e-001 # -0.5263 # -1.9196e-003 # 8.5361e-005 # -1.2856e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.0400 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # # # # 3685 # # # 2 # 0.000 # # # # # # # # # 0851 # Sept 4th 2014 # 4.6134 # 2.5497 # # # # # # # datcnv_date = Aug 06 2015 12:15:42, 7.23.2 [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2015-15\RAW\CTD\2015-15-0263.hex P:\Crui se_Data_Processing\2015-15\Processing\doc\2015-15-ctd.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Nov 16 2015 17:18:16, 7.23.2 # wildedit_in = P:\Cruise_Data_Processing\2015-15\Processing\convert\2015-15-026 3.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # celltm_date = Nov 16 2015 17:21:31, 7.23.2 # celltm_in = P:\Cruise_Data_Processing\2015-15\Processing\wildedit\2015-15-0263 .cnv # celltm_alpha = 0.0245, 0.0245 # celltm_tau = 9.5000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Nov 16 2015 17:27:54, 7.23.2 [derive_vars = 2] # Derive_in = P:\Cruise_Data_Processing\2015-15\Processing\celltm\2015-15-0263.c nv P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-ctd.XMLCON # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some near-surface records corrupted by shed wakes; salinity was cleaned. ---------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Fluorescence and pH data are nominal and unedited except that some records were removed in editing temperature and salinity. Recalibration of channel Salinity:T0:C0 was based on a post-cruise calibration and a comparison with bottle samples. Stops for bottles were often very short and there was a cruise between this one and the post-cruise calibration, but the salinity is likely good to +/- 0.002. A dissolved oxygen sensor was mounted but no data were acquired. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were collected. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see the report: 2015-15_Processing_Report.doc. ---------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (-0.2E-02 1) $END !--1--- ---2---- ---3--- ---4--- ---5---- -6-- !Pressu Temperat Fluores pH:SBE: Salinity Numb !re ure: cence: Nominal :T0:C0 er_o ! Primary URU: ~bin ! Seapoin _rec ! t ords !------ -------- ------- ------- -------- ---- *END OF HEADER 3.4 12.4456 6.627 8.221 31.8801 20 4.0 11.8804 7.047 8.198 31.9519 33 5.0 11.3146 8.958 8.161 32.0116 57 6.0 11.2404 10.035 8.123 32.0101 46 7.0 10.7457 9.262 8.078 32.0461 31 8.0 10.3004 8.086 8.034 32.0688 32 9.0 10.0527 5.883 7.990 32.0779 32 10.0 9.8026 4.048 7.949 32.0535 35 11.0 9.6988 3.670 7.922 32.0461 39 12.0 9.6832 3.593 7.904 32.0558 30 13.0 9.6901 2.521 7.895 32.0697 19 14.0 9.7684 2.810 7.899 32.1107 23 15.0 9.9314 2.105 7.906 32.2152 28 16.0 9.9604 1.793 7.912 32.2459 27 17.0 9.9757 1.780 7.914 32.2602 25 18.0 9.9843 1.945 7.917 32.2656 26 19.0 9.9945 1.319 7.917 32.2720 33 20.0 10.0457 1.214 7.921 32.3076 34 21.0 10.1165 1.158 7.923 32.4157 27 22.0 9.9378 1.370 7.917 32.4356 25 23.0 9.8467 1.161 7.908 32.4350 23 24.0 9.7403 1.037 7.896 32.4288 23 25.0 9.5959 0.953 7.886 32.4293 24 26.0 9.6044 0.912 7.881 32.4593 27 27.0 9.7676 0.709 7.885 32.5641 29 28.0 9.7904 0.592 7.883 32.6103 31 29.0 9.5312 0.432 7.870 32.6248 37 30.0 9.3750 0.384 7.855 32.6474 25 31.0 9.3030 0.282 7.845 32.6652 20 32.0 9.2128 0.256 7.837 32.6770 20 33.0 9.0843 0.223 7.830 32.7004 25 34.0 8.9891 0.294 7.820 32.7215 41 34.9 8.9194 0.185 7.805 32.7335 31 36.0 8.8718 0.239 7.795 32.7443 21 37.0 8.8785 0.176 7.793 32.7720 19 38.0 8.8611 0.148 7.789 32.8004 22 39.0 8.8313 0.195 7.789 32.8170 26 40.0 8.7858 0.164 7.785 32.8340 30 41.0 8.7103 0.126 7.782 32.8422 35 42.0 8.6336 0.461 7.772 32.8516 32 43.0 8.5816 0.269 7.761 32.8528 27 44.0 8.5646 0.222 7.749 32.8510 21 45.0 8.4455 0.155 7.737 32.8477 20 46.0 8.3766 0.174 7.727 32.8598 22 47.0 8.3525 0.117 7.720 32.8698 21 48.0 8.3086 0.114 7.715 32.8838 24 49.0 8.2876 0.114 7.710 32.8889 26 50.0 8.2572 0.109 7.704 32.9023 29 51.0 8.2007 0.110 7.696 32.9255 34 52.0 8.0815 0.144 7.686 32.9833 35 53.0 8.0644 0.097 7.673 32.9912 28 54.0 8.0553 0.111 7.663 32.9976 23 55.0 8.0268 0.108 7.659 33.0197 21 56.0 7.9711 0.102 7.655 33.0639 22 57.0 7.9250 0.125 7.653 33.0983 27 58.0 7.8622 0.097 7.649 33.1443 31 59.0 7.8321 0.086 7.647 33.1658 30 60.0 7.8258 0.080 7.645 33.1705 30 61.0 7.8151 0.093 7.644 33.1789 26 62.0 7.7613 0.092 7.644 33.2211 26 63.0 7.7214 0.087 7.645 33.2580 26 64.0 7.7139 0.080 7.648 33.2655 28 65.1 7.7004 0.065 7.650 33.2762 37 66.0 7.6892 0.068 7.650 33.2799 39 67.0 7.6674 0.061 7.646 33.2929 23 68.0 7.6544 0.061 7.647 33.3041 19 69.0 7.6412 0.073 7.655 33.3229 21 70.0 7.6147 0.067 7.669 33.3753 25 71.1 7.5846 0.105 7.680 33.4035 42 71.9 7.5642 0.077 7.685 33.4172 42 73.0 7.5398 0.086 7.691 33.4334 26 74.0 7.5338 0.065 7.693 33.4355 20 75.0 7.5209 0.053 7.695 33.4436 19 76.0 7.5064 0.056 7.698 33.4544 21 77.1 7.4965 0.063 7.698 33.4628 30 78.0 7.4726 0.057 7.701 33.4811 47 79.0 7.4425 0.059 7.701 33.5047 35 80.0 7.4180 0.058 7.701 33.5307 27 81.0 7.4097 0.058 7.702 33.5428 25 82.0 7.4070 0.065 7.702 33.5469 23 83.0 7.3986 0.063 7.698 33.5600 23 84.0 7.3875 0.060 7.694 33.5746 29 85.0 7.3847 0.062 7.692 33.5770 40 86.0 7.3614 0.075 7.682 33.5867 30 87.0 7.3161 0.074 7.667 33.6056 24 88.0 7.3063 0.083 7.658 33.6213 23 89.0 7.3035 0.058 7.654 33.6288 24 90.0 7.3014 0.049 7.651 33.6350 23 91.0 7.3093 0.049 7.654 33.6445 23 92.0 7.3229 0.054 7.656 33.6530 29 93.0 7.3327 0.052 7.660 33.6575 52 93.9 7.3450 0.049 7.669 33.6649 29 95.0 7.3456 0.049 7.674 33.6727 21 96.0 7.3398 0.051 7.676 33.6782 19 97.0 7.3357 0.071 7.677 33.6807 22 98.0 7.3345 0.051 7.678 33.6812 27 99.0 7.3314 0.049 7.675 33.6821 29 100.0 7.3291 0.052 7.674 33.6834 25 101.0 7.3226 0.049 7.671 33.6873 27 102.0 7.3120 0.051 7.670 33.6950 36 103.0 7.3092 0.058 7.667 33.6963 32 104.0 7.3073 0.052 7.665 33.6979 26 105.0 7.3083 0.049 7.665 33.6987 24 106.0 7.3058 0.053 7.665 33.6998 28 107.0 7.2915 0.053 7.663 33.7032 35 108.0 7.2837 0.049 7.660 33.7052 32 109.0 7.2769 0.049 7.657 33.7064 25 110.0 7.2729 0.053 7.656 33.7112 22 111.0 7.2721 0.049 7.656 33.7296 21 112.0 7.2513 0.049 7.655 33.7454 26 113.0 7.2434 0.053 7.655 33.7678 35 114.0 7.2473 0.057 7.656 33.7831 39 115.0 7.2252 0.055 7.655 33.7930 25 116.0 7.1675 0.061 7.648 33.7995 20 117.0 7.0675 0.061 7.631 33.8101 20 118.1 6.9012 0.061 7.609 33.8292 33 118.9 6.8345 0.069 7.587 33.8355 59 120.0 6.8201 0.083 7.568 33.8369 33 120.9 6.8138 0.078 7.557 33.8378 32