*2016/04/20 12:06:02.16 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2015/07/14 15:52:29.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 109 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 5B4E0AE7 NUMBER OF CHANNELS : 6 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 3.424833 111.0917 2 Temperature:Primary 'deg C (ITS90)' 7.016355 12.9584 3 Fluorescence:URU:Seapoint mg/m^3 0.61E-01 9.618505 4 pH:SBE:Nominal n/a 7.508968 8.23946 5 Salinity:T0:C0 PSS-78 31.51064 33.7595 6 Number_of_bin_records n/a 6 89 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2015-15\Pro $END *ADMINISTRATION MISSION : 2015-15 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Thiess M. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Juan de Fuca Strait / WCVI / Johnstone Strait STATION : EP 03 EVENT NUMBER : 260 LATITUDE : 49 16.70000 N ! (deg min) LONGITUDE : 126 42.24000 W ! (deg min) WATER DEPTH : 120 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------- -------------- ---------- Temperature ' ' 4752 Conductivity ' ' 3396 'Pressure:Digiquartz with TC' ' ' 0585 Temperature:2 ' ' 2449 Conductivity:2 ' ' 2399 'Oxygen:SBE 43' ' ' 1119 Fluorometer:Seapoint ' ' 3685 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.4.1 2016/04/12 14:20:24 6887 6887 CLEAN 5.2.1 2016/04/12 14:21:52 6887 6887 SHIFTDAT 3.4 2016/04/12 16:46:40 6887 6887 SHIFTDAT 3.4 2016/04/12 17:34:08 6887 6887 SHIFTDAT 3.4 2016/04/13 10:23:47 6887 6887 DELETE 6.3 2016/04/13 10:28:50 6887 2999 CTDEDIT 5.0.4 2016/04/18 09:56:27 2999 2883 CALIB 11.8.1 2016/04/20 11:34:22 2883 2883 FILTERS 4.3 2016/04/20 11:35:16 2883 2883 BINAVE 4.2 2016/04/20 11:48:28 2883 109 REMOVECH 8.2 2016/04/20 11:48:41 109 109 HDREDIT2 3.0.2 2016/04/20 12:06:02 ? ? $END $REMARKS -CLEAN functions: 2016/04/12 14:21:26 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 50.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.70 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 101.61 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2016/04/18 09:56:27 116 records were deleted in this editing session. 40 changes in channel Salinity:T0:C0 -CALIB parameters: 2016/04/20 11:34:22 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 12 Salinity:T0:C0 PSS-78 10 -0.2000000E-02 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2016/04/20 11:48:41 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -HEADER EDITS: 2016/04/20 12:06:02 Applied edit header: P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\CTD Data\2015-15\2015-15-0260.hex Software Version Seasave V 7.21d Temperature SN = 4752 Conductivity SN = 3396 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 14 2015 08:56:00 NMEA Latitude = 49 16.70 N NMEA Longitude = 126 42.24 W NMEA UTC (Time) = Jul 14 2015 15:52:29 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ship: W.E. Ricker 2015-15 Station: EP 03 Operator: HM Depth: 120 m System UTC = Jul 14 2015 15:56:00 # nquan = 14 # nvalues = 6887 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flSP: Fluorescence, Seapoint # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = flag: flag # span 0 = 1, 6887 # span 1 = 3.180, 111.615 # span 2 = 7.0155, 12.9709 # span 3 = 7.0170, 12.9726 # span 4 = 3.422268, 3.726153 # span 5 = 3.459470, 3.769377 # span 6 = 3.6630e-02, 1.2149e+01 # span 7 = 0.0000, 0.0000 # span 8 = 7.499, 8.248 # span 9 = -1.443, 1.507 # span 10 = 0, 1 # span 11 = 31.3482, 33.7632 # span 12 = 31.8503, 34.1699 # span 13 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 14 2015 15:52:29 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 4752 # 23-Jan-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35902423e-003 # 6.36413981e-004 # 2.06309769e-005 # 1.71365270e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3396 # 19-Dec-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -9.91941065e+000 # 1.31439274e+000 # 3.00845560e-005 # 6.13621985e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0585 # 30-Dec-13 # -3.951550e+004 # -4.415130e-001 # 1.282560e-002 # 3.560600e-002 # 0.000000e+000 # 3.030045e+001 # -4.415690e-004 # 4.342710e-006 # 1.736800e-009 # 0.99994600 # -2.11246 # 0.000000e+000 # 1.288270e-002 # -8.164490e+000 # # # # # # 2449 # 06-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35517974e-003 # 6.43485967e-004 # 2.33381062e-005 # 2.21338578e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2399 # 17-Jan-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.08277491e+001 # 1.61475240e+000 # 1.24520243e-003 # 1.93505039e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1119 # 21-Jan-14 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.4901e-001 # -0.5263 # -1.9196e-003 # 8.5361e-005 # -1.2856e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.0400 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # # # # 3685 # # # 2 # 0.000 # # # # # # # # # 0851 # Sept 4th 2014 # 4.6134 # 2.5497 # # # # # # # datcnv_date = Aug 06 2015 12:15:41, 7.23.2 [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2015-15\RAW\CTD\2015-15-0260.hex P:\Crui se_Data_Processing\2015-15\Processing\doc\2015-15-ctd.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Nov 16 2015 17:18:16, 7.23.2 # wildedit_in = P:\Cruise_Data_Processing\2015-15\Processing\convert\2015-15-026 0.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # celltm_date = Nov 16 2015 17:21:31, 7.23.2 # celltm_in = P:\Cruise_Data_Processing\2015-15\Processing\wildedit\2015-15-0260 .cnv # celltm_alpha = 0.0245, 0.0245 # celltm_tau = 9.5000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Nov 16 2015 17:27:53, 7.23.2 [derive_vars = 2] # Derive_in = P:\Cruise_Data_Processing\2015-15\Processing\celltm\2015-15-0260.c nv P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-ctd.XMLCON # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove records corrupted by shed wakes; salinity was cleaned. ---------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Fluorescence and pH data are nominal and unedited except that some records were removed in editing temperature and salinity. Recalibration of channel Salinity:T0:C0 was based on a post-cruise calibration and a comparison with bottle samples. Stops for bottles were often very short and there was a cruise between this one and the post-cruise calibration, but the salinity is likely good to +/- 0.002. A dissolved oxygen sensor was mounted but no data were acquired. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were collected. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see the report: 2015-15_Processing_Report.doc. ---------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (-0.2E-02 1) $END !--1--- ---2---- ---3--- ---4--- ---5---- -6-- !Pressu Temperat Fluores pH:SBE: Salinity Numb !re ure: cence: Nominal :T0:C0 er_o ! Primary URU: ~bin ! Seapoin _rec ! t ords !------ -------- ------- ------- -------- ---- *END OF HEADER 3.4 12.9584 7.729 8.235 31.5117 6 4.1 12.9526 7.497 8.238 31.5123 69 4.9 12.9335 8.012 8.238 31.5120 53 6.4 12.6023 8.493 8.220 31.5163 19 6.9 12.8726 9.619 8.231 31.5106 89 7.9 12.9237 8.752 8.239 31.5114 37 9.0 11.6948 7.577 8.176 31.5188 22 10.0 10.8386 6.276 8.095 31.5278 33 11.0 10.9745 6.967 8.054 31.5560 38 12.2 11.8678 6.695 8.092 31.5907 18 13.0 11.6609 6.376 8.099 31.6118 30 14.0 11.5283 6.876 8.089 31.6294 30 15.0 10.9052 7.040 8.047 31.6762 27 16.0 10.7583 5.625 8.027 31.6944 21 17.0 10.7518 5.748 8.018 31.7002 19 18.0 10.7513 6.062 8.009 31.7113 27 19.0 10.5475 4.321 7.984 31.7242 29 20.0 10.3476 5.274 7.963 31.7779 23 21.0 10.2639 4.456 7.949 31.8655 21 22.0 10.1939 2.756 7.937 31.8994 20 23.0 9.9274 2.061 7.924 31.9639 22 24.0 9.8762 1.595 7.915 31.9972 23 25.0 9.9166 1.364 7.911 32.0855 24 26.0 9.8901 1.024 7.907 32.1016 30 27.0 9.9016 1.066 7.902 32.1169 32 28.0 9.8216 0.771 7.880 32.1622 25 29.0 9.5464 0.898 7.860 32.1815 19 30.0 9.5278 0.551 7.856 32.2245 20 31.0 9.6519 0.469 7.857 32.2727 20 32.0 9.7000 0.451 7.864 32.2971 23 33.0 9.7938 0.462 7.866 32.3665 25 34.0 9.4255 0.413 7.856 32.3529 26 35.0 9.5456 0.415 7.856 32.4271 26 36.0 9.6158 0.389 7.857 32.4549 26 37.0 9.6555 0.252 7.860 32.4729 25 38.0 9.6455 0.307 7.862 32.5000 25 39.0 9.6213 0.348 7.863 32.5421 23 40.0 9.6045 0.288 7.863 32.5590 22 41.0 9.5778 0.365 7.863 32.5707 22 42.0 9.4950 0.346 7.853 32.5825 25 43.0 9.1620 0.302 7.832 32.6335 25 44.0 9.0402 0.218 7.812 32.6511 24 45.0 9.0265 0.234 7.799 32.6507 24 46.0 9.0060 0.162 7.791 32.6498 23 47.0 8.9972 0.153 7.786 32.6510 23 48.0 8.9885 0.262 7.781 32.6508 25 49.0 8.9592 0.215 7.772 32.6526 37 50.0 8.8665 0.176 7.765 32.6794 28 51.0 8.8087 0.142 7.765 32.7488 21 52.0 8.8168 0.117 7.765 32.7848 18 53.0 8.8114 0.148 7.761 32.7912 18 54.0 8.7660 0.112 7.757 32.8027 20 55.0 8.7554 0.089 7.756 32.8068 26 56.0 8.7738 0.069 7.756 32.8154 34 57.0 8.7153 0.065 7.747 32.8408 36 58.0 8.6101 0.109 7.734 32.8469 25 59.0 8.5090 0.097 7.727 32.8559 21 60.0 8.4603 0.105 7.722 32.8666 21 61.0 8.4458 0.124 7.719 32.8716 24 62.0 8.4306 0.108 7.715 32.8754 27 63.0 8.3472 0.094 7.707 32.9003 34 64.0 8.2049 0.069 7.694 32.9487 33 65.0 8.1557 0.083 7.687 32.9663 22 66.0 8.1281 0.092 7.680 32.9795 18 67.0 8.0746 0.116 7.676 33.0122 19 68.0 8.0236 0.114 7.672 33.0443 23 69.0 8.0003 0.099 7.667 33.0582 29 70.0 7.9931 0.083 7.663 33.0622 26 71.0 7.9916 0.081 7.660 33.0632 24 72.0 7.9904 0.084 7.659 33.0643 30 73.0 7.9877 0.071 7.656 33.0671 31 74.0 7.9802 0.072 7.655 33.0744 25 75.0 7.9647 0.061 7.656 33.0876 23 76.0 7.9343 0.061 7.657 33.1109 25 77.0 7.8927 0.086 7.656 33.1400 30 78.0 7.8563 0.064 7.655 33.1640 29 79.0 7.7952 0.064 7.651 33.2034 22 80.0 7.7365 0.076 7.647 33.2413 21 81.0 7.7115 0.071 7.645 33.2581 24 82.0 7.6492 0.079 7.642 33.3004 33 83.0 7.6099 0.088 7.634 33.3304 27 84.0 7.5205 0.073 7.627 33.3972 22 85.0 7.4650 0.073 7.621 33.4399 21 86.0 7.4253 0.076 7.616 33.4705 25 87.1 7.3798 0.072 7.610 33.5044 36 88.0 7.3554 0.068 7.604 33.5222 43 89.0 7.3214 0.083 7.595 33.5481 29 90.0 7.3051 0.086 7.590 33.5601 22 91.0 7.2797 0.082 7.585 33.5784 21 92.0 7.2634 0.131 7.581 33.5919 21 93.0 7.2388 0.100 7.576 33.6100 20 94.0 7.2088 0.116 7.572 33.6312 20 95.0 7.1703 0.101 7.568 33.6567 23 96.0 7.1123 0.083 7.561 33.6972 31 97.0 7.1020 0.077 7.555 33.7048 43 98.0 7.0923 0.076 7.549 33.7096 39 99.0 7.0872 0.075 7.542 33.7138 32 100.0 7.0773 0.076 7.538 33.7193 22 101.0 7.0724 0.123 7.535 33.7218 17 102.0 7.0692 0.098 7.533 33.7238 16 103.0 7.0610 0.101 7.532 33.7293 17 104.0 7.0522 0.106 7.527 33.7351 19 104.9 7.0397 0.093 7.526 33.7433 24 106.2 7.0302 0.089 7.517 33.7496 24 107.0 7.0293 0.085 7.514 33.7503 25 108.0 7.0243 0.093 7.513 33.7540 20 109.0 7.0217 0.101 7.512 33.7558 19 110.0 7.0180 0.097 7.512 33.7585 21 111.1 7.0164 0.093 7.509 33.7595 31