*2016/04/20 12:06:01.79 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2015/07/11 23:11:18.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 80 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 634BD650 NUMBER OF CHANNELS : 6 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 3.482 81.5547 2 Temperature:Primary 'deg C (ITS90)' 7.02301 13.371 3 Fluorescence:URU:Seapoint mg/m^3 0.8352381E-01 7.734218 4 pH:SBE:Nominal n/a 7.5465 8.341458 5 Salinity:T0:C0 PSS-78 31.67332 33.67764 6 Number_of_bin_records n/a 2 98 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2015-15\Pro $END *ADMINISTRATION MISSION : 2015-15 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Thiess M. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Juan de Fuca Strait / WCVI / Johnstone Strait STATION : VI 06/LC 06 EVENT NUMBER : 239 LATITUDE : 48 36.40000 N ! (deg min) LONGITUDE : 125 54.09000 W ! (deg min) WATER DEPTH : 96 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------- -------------- ---------- Temperature ' ' 4752 Conductivity ' ' 3396 'Pressure:Digiquartz with TC' ' ' 0585 Temperature:2 ' ' 2449 Conductivity:2 ' ' 2399 'Oxygen:SBE 43' ' ' 1119 Fluorometer:Seapoint ' ' 3685 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.4.1 2016/04/12 14:20:11 5548 5548 CLEAN 5.2.1 2016/04/12 14:21:39 5548 5548 SHIFTDAT 3.4 2016/04/12 16:46:26 5548 5548 SHIFTDAT 3.4 2016/04/12 17:33:54 5548 5548 SHIFTDAT 3.4 2016/04/13 10:23:35 5548 5548 DELETE 6.3 2016/04/13 10:28:40 5548 2219 CTDEDIT 5.0.4 2016/04/15 15:39:16 2219 2152 CALIB 11.8.1 2016/04/20 11:34:15 2152 2152 FILTERS 4.3 2016/04/20 11:35:10 2152 2152 BINAVE 4.2 2016/04/20 11:48:25 2152 80 REMOVECH 8.2 2016/04/20 11:48:41 80 80 HDREDIT2 3.0.2 2016/04/20 12:06:01 ? ? $END $REMARKS -CLEAN functions: 2016/04/12 14:21:26 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 50.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.70 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 71.93 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2016/04/15 15:39:16 67 records were deleted in this editing session. 4 changes in channel Salinity:T0:C0 -CALIB parameters: 2016/04/20 11:34:15 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 12 Salinity:T0:C0 PSS-78 10 -0.2000000E-02 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2016/04/20 11:48:41 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -HEADER EDITS: 2016/04/20 12:06:01 Applied edit header: P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\CTD Data\2015-15\2015-15-0239.hex Software Version Seasave V 7.21d Temperature SN = 4752 Conductivity SN = 3396 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 11 2015 16:14:46 NMEA Latitude = 48 36.40 N NMEA Longitude = 125 54.09 W NMEA UTC (Time) = Jul 11 2015 23:11:18 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ship: W.E. Ricker 2015-15 Station: Vi 06/LC 06 Operator: HM Depth: 96 m System UTC = Jul 11 2015 23:14:46 # nquan = 14 # nvalues = 5548 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flSP: Fluorescence, Seapoint # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = flag: flag # span 0 = 1, 5548 # span 1 = 3.238, 81.925 # span 2 = 7.0225, 13.3931 # span 3 = 7.0236, 13.3961 # span 4 = 3.413884, 3.781444 # span 5 = 3.433560, 3.802736 # span 6 = 4.8840e-02, 1.4115e+01 # span 7 = 0.0000, 0.0000 # span 8 = 7.537, 8.347 # span 9 = -1.567, 1.328 # span 10 = 0, 1 # span 11 = 31.6215, 33.6809 # span 12 = 31.8030, 33.8932 # span 13 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 11 2015 23:11:18 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 4752 # 23-Jan-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35902423e-003 # 6.36413981e-004 # 2.06309769e-005 # 1.71365270e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3396 # 19-Dec-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -9.91941065e+000 # 1.31439274e+000 # 3.00845560e-005 # 6.13621985e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0585 # 30-Dec-13 # -3.951550e+004 # -4.415130e-001 # 1.282560e-002 # 3.560600e-002 # 0.000000e+000 # 3.030045e+001 # -4.415690e-004 # 4.342710e-006 # 1.736800e-009 # 0.99994600 # -2.11246 # 0.000000e+000 # 1.288270e-002 # -8.164490e+000 # # # # # # 2449 # 06-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35517974e-003 # 6.43485967e-004 # 2.33381062e-005 # 2.21338578e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2399 # 17-Jan-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.08277491e+001 # 1.61475240e+000 # 1.24520243e-003 # 1.93505039e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1119 # 21-Jan-14 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.4901e-001 # -0.5263 # -1.9196e-003 # 8.5361e-005 # -1.2856e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.0400 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # # # # 3685 # # # 2 # 0.000 # # # # # # # # # 0851 # Sept 4th 2014 # 4.6134 # 2.5497 # # # # # # # datcnv_date = Aug 06 2015 12:15:33, 7.23.2 [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2015-15\RAW\CTD\2015-15-0239.hex P:\Crui se_Data_Processing\2015-15\Processing\doc\2015-15-ctd.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Nov 16 2015 17:18:13, 7.23.2 # wildedit_in = P:\Cruise_Data_Processing\2015-15\Processing\convert\2015-15-023 9.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # celltm_date = Nov 16 2015 17:21:27, 7.23.2 # celltm_in = P:\Cruise_Data_Processing\2015-15\Processing\wildedit\2015-15-0239 .cnv # celltm_alpha = 0.0245, 0.0245 # celltm_tau = 9.5000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Nov 16 2015 17:27:49, 7.23.2 [derive_vars = 2] # Derive_in = P:\Cruise_Data_Processing\2015-15\Processing\celltm\2015-15-0239.c nv P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-ctd.XMLCON # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some records near the bottom of the cast; salinity was cleaned lightly. ---------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Fluorescence and pH data are nominal and unedited except that some records were removed in editing temperature and salinity. Recalibration of channel Salinity:T0:C0 was based on a post-cruise calibration and a comparison with bottle samples. Stops for bottles were often very short and there was a cruise between this one and the post-cruise calibration, but the salinity is likely good to +/- 0.002. A dissolved oxygen sensor was mounted but no data were acquired. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were collected. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see the report: 2015-15_Processing_Report.doc. ---------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (-0.2E-02 1) $END !--1--- ---2---- ---3--- ---4--- ---5---- -6-- !Pressu Temperat Fluores pH:SBE: Salinity Numb !re ure: cence: Nominal :T0:C0 er_o ! Primary URU: ~bin ! Seapoin _rec ! t ords !------ -------- ------- ------- -------- ---- *END OF HEADER 3.5 13.3710 3.535 8.335 31.6744 2 3.9 13.3702 3.255 8.335 31.6739 98 4.9 13.3702 3.200 8.336 31.6733 57 6.0 13.3649 2.720 8.337 31.6741 28 7.0 13.3561 3.399 8.341 31.6754 24 8.0 13.1546 5.482 8.285 31.7467 23 9.0 11.5080 7.734 8.175 32.2650 23 10.0 10.6372 6.588 8.094 32.3932 23 11.0 10.2238 5.842 8.043 32.4222 25 12.0 10.0500 6.003 7.995 32.4526 31 13.0 9.7655 4.294 7.942 32.5051 24 14.0 9.4225 2.752 7.916 32.6079 25 15.0 9.3842 2.313 7.894 32.6741 25 16.0 9.2655 1.944 7.874 32.7253 26 17.0 9.1420 1.374 7.859 32.7767 25 18.0 9.0722 1.050 7.849 32.8050 24 19.0 9.0561 1.001 7.841 32.8106 29 20.0 9.0382 1.052 7.834 32.8186 29 21.0 9.0183 0.739 7.830 32.8270 23 22.0 8.9993 0.568 7.823 32.8357 21 23.0 8.9600 0.570 7.815 32.8524 24 24.0 8.8286 0.578 7.804 32.9021 29 25.0 8.7146 0.361 7.794 32.9389 26 26.0 8.6436 0.311 7.784 32.9562 22 27.0 8.5611 0.325 7.773 32.9758 22 28.0 8.4312 0.203 7.765 33.0031 24 29.0 8.4061 0.164 7.759 33.0127 27 30.0 8.3961 0.229 7.754 33.0189 24 31.0 8.3813 0.233 7.751 33.0263 22 32.0 8.3402 0.113 7.743 33.0390 22 33.0 8.2654 0.394 7.736 33.0440 24 34.0 8.1937 0.451 7.729 33.0566 25 35.0 8.1457 0.218 7.724 33.0838 25 36.0 8.1366 0.170 7.720 33.0988 28 37.0 8.1019 0.157 7.715 33.1094 27 38.0 8.0476 0.129 7.706 33.1148 24 39.0 7.9031 0.101 7.692 33.1270 23 40.0 7.8820 0.137 7.684 33.1398 21 41.0 7.8686 0.273 7.678 33.1492 21 42.0 7.8644 0.138 7.672 33.1515 26 43.0 7.8601 0.107 7.669 33.1546 24 44.0 7.8645 0.084 7.668 33.1757 21 45.0 7.8844 0.098 7.669 33.1995 19 46.0 7.8976 0.089 7.672 33.2144 22 47.0 7.9246 0.184 7.674 33.2322 26 48.0 7.9451 0.218 7.677 33.2478 30 49.0 7.9336 0.138 7.679 33.2578 24 50.0 7.9158 0.096 7.678 33.2603 21 51.0 7.8843 0.094 7.677 33.2563 23 52.0 7.8591 0.099 7.673 33.2583 38 52.9 7.8676 0.121 7.673 33.2749 29 54.0 7.8749 0.088 7.674 33.2900 21 55.0 7.8570 0.094 7.673 33.2974 19 56.0 7.8460 0.085 7.673 33.3032 20 57.0 7.8358 0.803 7.673 33.3062 24 58.0 7.8268 0.304 7.670 33.3075 23 59.0 7.8136 0.211 7.669 33.3101 23 60.0 7.8031 0.201 7.666 33.3128 21 61.0 7.7795 0.148 7.664 33.3213 28 62.0 7.7697 0.129 7.662 33.3260 31 63.0 7.7618 0.136 7.658 33.3293 22 64.0 7.7153 0.121 7.654 33.3488 21 65.0 7.6637 0.127 7.650 33.3713 27 66.0 7.6280 0.115 7.646 33.3863 34 67.0 7.5980 0.132 7.642 33.3996 26 68.0 7.5795 0.137 7.636 33.4072 23 69.0 7.5584 0.169 7.631 33.4153 24 70.0 7.4811 0.214 7.627 33.4508 30 71.0 7.3760 0.276 7.616 33.5004 29 72.0 7.2136 0.465 7.602 33.5807 23 73.0 7.0985 0.224 7.591 33.6372 23 74.0 7.0550 0.208 7.586 33.6584 23 75.0 7.0431 0.289 7.580 33.6640 25 76.0 7.0415 0.312 7.572 33.6649 28 77.1 7.0310 0.420 7.566 33.6709 39 78.0 7.0280 0.444 7.559 33.6729 42 79.0 7.0240 0.523 7.553 33.6758 56 80.0 7.0230 0.678 7.551 33.6770 41 81.0 7.0241 0.542 7.549 33.6767 41 81.6 7.0233 0.591 7.546 33.6776 10