*2016/04/20 12:06:01.42 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2015/07/10 21:46:35.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 124 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : AD26A0C9 NUMBER OF CHANNELS : 6 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 3.398167 125.8689 2 Temperature:Primary 'deg C (ITS90)' 6.862047 11.30039 3 Fluorescence:URU:Seapoint mg/m^3 0.9844444E-01 0.7373846 4 pH:SBE:Nominal n/a 7.533 7.829517 5 Salinity:T0:C0 PSS-78 31.24383 33.77977 6 Number_of_bin_records n/a 12 38 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2015-15\Pro $END *ADMINISTRATION MISSION : 2015-15 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Thiess M. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Juan de Fuca Strait / WCVI / Johnstone Strait STATION : JF02 EVENT NUMBER : 218 LATITUDE : 48 20.19000 N ! (deg min) LONGITUDE : 123 50.98000 W ! (deg min) WATER DEPTH : 134 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------- -------------- ---------- Temperature ' ' 4752 Conductivity ' ' 3396 'Pressure:Digiquartz with TC' ' ' 0585 Temperature:2 ' ' 2449 Conductivity:2 ' ' 2399 'Oxygen:SBE 43' ' ' 1119 Fluorometer:Seapoint ' ' 3685 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.4.1 2016/04/12 14:20:01 7546 7546 CLEAN 5.2.1 2016/04/12 14:21:28 7546 7546 SHIFTDAT 3.4 2016/04/12 16:46:16 7546 7546 SHIFTDAT 3.4 2016/04/12 17:33:42 7546 7546 SHIFTDAT 3.4 2016/04/13 10:23:22 7546 7546 DELETE 6.3 2016/04/13 10:28:32 7546 3173 CTDEDIT 5.0.4 2016/04/14 13:39:58 3173 3142 CALIB 11.8.1 2016/04/20 11:34:10 3142 3142 FILTERS 4.3 2016/04/20 11:35:05 3142 3142 BINAVE 4.2 2016/04/20 11:48:23 3142 124 REMOVECH 8.2 2016/04/20 11:48:40 124 124 HDREDIT2 3.0.2 2016/04/20 12:06:01 ? ? $END $REMARKS -CLEAN functions: 2016/04/12 14:21:26 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 50.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.70 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 116.25 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2016/04/14 13:39:58 31 records were deleted in this editing session. 38 changes in channel Salinity:T0:C0 -CALIB parameters: 2016/04/20 11:34:10 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 12 Salinity:T0:C0 PSS-78 10 -0.2000000E-02 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2016/04/20 11:48:40 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -HEADER EDITS: 2016/04/20 12:06:01 Applied edit header: P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\CTD Data\2015-15\2015-15-0218.hex Software Version Seasave V 7.21d Temperature SN = 4752 Conductivity SN = 3396 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 10 2015 14:49:39 NMEA Latitude = 48 20.19 N NMEA Longitude = 123 50.98 W NMEA UTC (Time) = Jul 10 2015 21:46:35 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ship: W.E. Ricker 2015-15 Station: JF02 Operator: HM Depth: 134 m System UTC = Jul 10 2015 21:49:39 # nquan = 14 # nvalues = 7546 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flSP: Fluorescence, Seapoint # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = flag: flag # span 0 = 1, 7546 # span 1 = 3.100, 126.254 # span 2 = 6.8615, 11.3038 # span 3 = 6.8629, 11.3010 # span 4 = 3.410619, 3.552323 # span 5 = 3.431321, 3.575364 # span 6 = 6.1050e-02, 1.0134e+00 # span 7 = 0.0000, 0.0000 # span 8 = 7.527, 7.830 # span 9 = -1.145, 1.069 # span 10 = 0, 1 # span 11 = 31.2230, 33.7831 # span 12 = 31.4498, 34.0093 # span 13 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 10 2015 21:46:35 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 4752 # 23-Jan-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35902423e-003 # 6.36413981e-004 # 2.06309769e-005 # 1.71365270e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3396 # 19-Dec-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -9.91941065e+000 # 1.31439274e+000 # 3.00845560e-005 # 6.13621985e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0585 # 30-Dec-13 # -3.951550e+004 # -4.415130e-001 # 1.282560e-002 # 3.560600e-002 # 0.000000e+000 # 3.030045e+001 # -4.415690e-004 # 4.342710e-006 # 1.736800e-009 # 0.99994600 # -2.11246 # 0.000000e+000 # 1.288270e-002 # -8.164490e+000 # # # # # # 2449 # 06-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35517974e-003 # 6.43485967e-004 # 2.33381062e-005 # 2.21338578e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2399 # 17-Jan-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.08277491e+001 # 1.61475240e+000 # 1.24520243e-003 # 1.93505039e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1119 # 21-Jan-14 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.4901e-001 # -0.5263 # -1.9196e-003 # 8.5361e-005 # -1.2856e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.0400 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # # # # 3685 # # # 2 # 0.000 # # # # # # # # # 0851 # Sept 4th 2014 # 4.6134 # 2.5497 # # # # # # # datcnv_date = Aug 06 2015 12:15:26, 7.23.2 [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2015-15\RAW\CTD\2015-15-0218.hex P:\Crui se_Data_Processing\2015-15\Processing\doc\2015-15-ctd.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Nov 16 2015 17:18:10, 7.23.2 # wildedit_in = P:\Cruise_Data_Processing\2015-15\Processing\convert\2015-15-021 8.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # celltm_date = Nov 16 2015 17:21:24, 7.23.2 # celltm_in = P:\Cruise_Data_Processing\2015-15\Processing\wildedit\2015-15-0218 .cnv # celltm_alpha = 0.0245, 0.0245 # celltm_tau = 9.5000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Nov 16 2015 17:27:46, 7.23.2 [derive_vars = 2] # Derive_in = P:\Cruise_Data_Processing\2015-15\Processing\celltm\2015-15-0218.c nv P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-ctd.XMLCON # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove a few records near the top of the cast; salinity was cleaned very lightly. ---------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Fluorescence and pH data are nominal and unedited except that some records were removed in editing temperature and salinity. Recalibration of channel Salinity:T0:C0 was based on a post-cruise calibration and a comparison with bottle samples. Stops for bottles were often very short and there was a cruise between this one and the post-cruise calibration, but the salinity is likely good to +/- 0.002. A dissolved oxygen sensor was mounted but no data were acquired. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were collected. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see the report: 2015-15_Processing_Report.doc. ---------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (-0.2E-02 1) $END !--1--- ---2---- ---3--- ---4--- ---5---- -6-- !Pressu Temperat Fluores pH:SBE: Salinity Numb !re ure: cence: Nominal :T0:C0 er_o ! Primary URU: ~bin ! Seapoin _rec ! t ords !------ -------- ------- ------- -------- ---- *END OF HEADER 3.4 11.3004 0.415 7.825 31.2438 12 3.8 11.2707 0.390 7.825 31.2509 27 5.0 11.2720 0.427 7.830 31.2503 29 6.0 11.2150 0.452 7.827 31.2549 24 7.0 11.0689 0.499 7.825 31.2718 25 8.0 10.9670 0.497 7.825 31.2814 25 9.0 11.1296 0.438 7.825 31.2617 25 10.0 11.0720 0.469 7.825 31.2673 24 11.0 11.0104 0.444 7.825 31.2751 26 12.0 10.9908 0.533 7.825 31.2766 25 13.0 11.0132 0.547 7.825 31.2730 23 14.0 11.0037 0.526 7.824 31.2737 24 15.0 10.9097 0.538 7.819 31.2902 23 16.0 10.6077 0.712 7.813 31.3500 24 17.0 10.5709 0.625 7.810 31.3559 25 18.0 10.5458 0.635 7.807 31.3590 25 19.0 10.5322 0.617 7.803 31.3652 25 20.0 10.5028 0.613 7.800 31.3777 23 21.0 10.4952 0.737 7.799 31.3914 26 22.0 10.5124 0.562 7.799 31.4315 26 23.0 10.4849 0.652 7.799 31.4657 25 24.0 10.4691 0.617 7.799 31.4767 25 25.0 10.4565 0.621 7.799 31.4895 24 26.0 10.4320 0.557 7.798 31.5019 24 27.0 10.3993 0.558 7.795 31.5138 25 28.0 10.3492 0.567 7.794 31.5312 24 29.0 10.3229 0.629 7.791 31.5362 25 30.0 10.2673 0.598 7.789 31.5492 26 31.0 10.2301 0.608 7.785 31.5652 25 32.0 10.2205 0.564 7.783 31.5704 26 33.0 10.2154 0.573 7.780 31.5746 25 34.0 10.2103 0.544 7.781 31.5811 25 35.0 10.2033 0.574 7.781 31.5890 24 36.0 10.1734 0.678 7.777 31.6061 22 37.0 10.1257 0.556 7.776 31.6257 24 38.0 10.1064 0.482 7.774 31.6383 25 39.0 10.0603 0.463 7.772 31.6614 24 40.0 10.0278 0.448 7.770 31.6804 24 41.0 10.0069 0.438 7.767 31.6931 25 42.0 9.9419 0.460 7.765 31.7281 25 43.0 9.8945 0.426 7.762 31.7534 25 44.0 9.7926 0.385 7.757 31.8110 24 45.0 9.6887 0.400 7.754 31.8639 24 46.0 9.6392 0.357 7.749 31.8955 23 47.0 9.6276 0.334 7.746 31.9056 24 48.0 9.6140 0.309 7.744 31.9246 24 49.0 9.6008 0.311 7.742 31.9343 25 50.0 9.5818 0.294 7.740 31.9566 25 51.0 9.5509 0.316 7.740 31.9942 26 52.0 9.4760 0.344 7.737 32.0493 26 53.0 9.3476 0.269 7.735 32.1541 25 54.0 9.2240 0.270 7.730 32.2364 24 55.0 8.9772 0.182 7.722 32.3996 24 56.0 8.7991 0.186 7.716 32.5204 25 57.0 8.7113 0.220 7.710 32.5761 24 58.0 8.5044 0.167 7.701 32.7032 25 59.0 8.4655 0.229 7.694 32.7327 24 60.0 8.4591 0.211 7.690 32.7420 24 61.0 8.4438 0.188 7.685 32.7533 25 62.0 8.4050 0.196 7.682 32.7796 25 63.0 8.3892 0.206 7.681 32.7887 26 64.0 8.3642 0.213 7.677 32.8100 25 65.0 8.3496 0.204 7.677 32.8462 25 66.0 8.3698 0.213 7.677 32.8629 25 67.0 8.3940 0.144 7.678 32.8798 26 68.0 8.4062 0.147 7.681 32.8856 25 69.0 8.4220 0.153 7.682 32.8956 25 70.0 8.4277 0.130 7.685 32.9032 27 71.0 8.3620 0.144 7.685 32.9418 25 72.0 8.2506 0.116 7.682 32.9897 26 73.0 8.1762 0.106 7.679 33.0218 26 74.0 8.1439 0.112 7.673 33.0317 25 75.0 8.1285 0.098 7.672 33.0381 27 76.0 8.0949 0.107 7.668 33.0558 26 77.0 8.0733 0.112 7.665 33.0690 26 78.0 8.0454 0.104 7.663 33.0814 24 79.0 7.9931 0.105 7.659 33.1002 25 80.0 7.9151 0.109 7.654 33.1267 26 81.0 7.8648 0.108 7.649 33.1533 26 82.0 7.7828 0.099 7.643 33.2051 25 83.0 7.6788 0.104 7.637 33.2653 26 84.0 7.5307 0.121 7.629 33.3520 26 85.0 7.4923 0.143 7.623 33.3734 26 86.0 7.4759 0.138 7.619 33.3824 26 87.0 7.4762 0.168 7.615 33.3826 25 88.0 7.4710 0.150 7.612 33.3861 25 89.0 7.4546 0.170 7.608 33.3960 27 90.0 7.4507 0.171 7.606 33.3985 25 91.0 7.4153 0.181 7.603 33.4206 24 92.0 7.3852 0.155 7.599 33.4392 25 93.0 7.3579 0.169 7.597 33.4563 25 94.0 7.3319 0.171 7.594 33.4728 26 95.0 7.3062 0.192 7.591 33.4890 25 96.0 7.2540 0.150 7.588 33.5196 25 97.0 7.2341 0.139 7.584 33.5303 26 98.0 7.2223 0.142 7.582 33.5361 24 99.0 7.1990 0.134 7.579 33.5513 22 100.0 7.1510 0.120 7.575 33.5782 24 101.0 7.1450 0.139 7.571 33.5817 26 102.0 7.0908 0.137 7.569 33.6194 26 103.0 7.0705 0.134 7.566 33.6333 25 104.0 7.0511 0.143 7.563 33.6474 25 105.0 7.0293 0.169 7.561 33.6625 25 106.0 7.0111 0.180 7.559 33.6753 25 107.0 6.9926 0.216 7.556 33.6880 26 108.0 6.9472 0.260 7.553 33.7203 26 109.0 6.9155 0.307 7.552 33.7419 23 110.0 6.8954 0.329 7.548 33.7553 26 111.0 6.8923 0.354 7.547 33.7572 25 112.0 6.8824 0.397 7.545 33.7643 26 113.0 6.8751 0.410 7.542 33.7693 26 114.0 6.8738 0.393 7.542 33.7703 24 115.0 6.8734 0.397 7.541 33.7707 26 116.0 6.8719 0.401 7.539 33.7721 26 117.0 6.8678 0.431 7.537 33.7750 27 118.0 6.8658 0.445 7.537 33.7765 27 119.0 6.8639 0.468 7.537 33.7779 27 120.0 6.8629 0.499 7.537 33.7786 26 121.0 6.8624 0.507 7.537 33.7790 26 122.0 6.8625 0.534 7.534 33.7792 27 123.0 6.8623 0.550 7.533 33.7794 28 124.0 6.8621 0.534 7.533 33.7798 38 125.0 6.8620 0.565 7.533 33.7797 38 125.9 6.8623 0.574 7.533 33.7796 27