*2016/04/20 12:06:01.35 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2015/07/10 18:57:34.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 158 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : DCEBF2A0 NUMBER OF CHANNELS : 6 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 4.235308 160.5393 2 Temperature:Primary 'deg C (ITS90)' 7.243 10.69718 3 Fluorescence:URU:Seapoint mg/m^3 0.122 0.6803077 4 pH:SBE:Nominal n/a 7.565 7.724482 5 Salinity:T0:C0 PSS-78 31.20937 33.55796 6 Number_of_bin_records n/a 3 35 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2015-15\Pro $END *ADMINISTRATION MISSION : 2015-15 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Thiess M. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Juan de Fuca Strait / WCVI / Johnstone Strait STATION : JF01 EVENT NUMBER : 215 LATITUDE : 48 17.35000 N ! (deg min) LONGITUDE : 123 36.60000 W ! (deg min) WATER DEPTH : 177 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------- -------------- ---------- Temperature ' ' 4752 Conductivity ' ' 3396 'Pressure:Digiquartz with TC' ' ' 0585 Temperature:2 ' ' 2449 Conductivity:2 ' ' 2399 'Oxygen:SBE 43' ' ' 1119 Fluorometer:Seapoint ' ' 3685 pH ' ' 0851 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.4.1 2016/04/12 14:19:58 9094 9094 CLEAN 5.2.1 2016/04/12 14:21:26 9094 9094 SHIFTDAT 3.4 2016/04/12 16:46:14 9094 9094 SHIFTDAT 3.4 2016/04/12 17:33:38 9094 9094 SHIFTDAT 3.4 2016/04/13 10:23:20 9094 9094 DELETE 6.3 2016/04/13 10:28:31 9094 4074 CTDEDIT 5.0.4 2016/04/14 13:34:20 4074 3980 CALIB 11.8.1 2016/04/20 11:34:09 3980 3980 FILTERS 4.3 2016/04/20 11:35:05 3980 3980 BINAVE 4.2 2016/04/20 11:48:22 3980 158 REMOVECH 8.2 2016/04/20 11:48:40 158 158 HDREDIT2 3.0.2 2016/04/20 12:06:01 ? ? $END $REMARKS -CLEAN functions: 2016/04/12 14:21:26 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 50.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.70 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 151.44 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2016/04/14 13:34:20 94 records were deleted in this editing session. 25 changes in channel Salinity:T0:C0 -CALIB parameters: 2016/04/20 11:34:09 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 12 Salinity:T0:C0 PSS-78 10 -0.2000000E-02 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2016/04/20 11:48:40 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -HEADER EDITS: 2016/04/20 12:06:01 Applied edit header: P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\CTD Data\2015-15\2015-15-0215.hex Software Version Seasave V 7.21d Temperature SN = 4752 Conductivity SN = 3396 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 10 2015 12:00:39 NMEA Latitude = 48 17.35 N NMEA Longitude = 123 36.60 W NMEA UTC (Time) = Jul 10 2015 18:57:34 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ship: W.E. Ricker 2015-15 Station: JF01 Operator: HM Depth: 177 m System UTC = Jul 10 2015 19:00:39 # nquan = 14 # nvalues = 9094 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flSP: Fluorescence, Seapoint # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = flag: flag # span 0 = 1, 9094 # span 1 = 2.763, 161.442 # span 2 = 7.2335, 10.7063 # span 3 = 7.2321, 10.7024 # span 4 = 3.426010, 3.496468 # span 5 = 3.446917, 3.519278 # span 6 = 8.5470e-02, 1.2332e+00 # span 7 = 0.0000, 0.0000 # span 8 = 7.556, 7.752 # span 9 = -1.215, 1.367 # span 10 = 0, 1 # span 11 = 31.2060, 33.5659 # span 12 = 31.4355, 33.7953 # span 13 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 10 2015 18:57:34 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 4752 # 23-Jan-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35902423e-003 # 6.36413981e-004 # 2.06309769e-005 # 1.71365270e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3396 # 19-Dec-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -9.91941065e+000 # 1.31439274e+000 # 3.00845560e-005 # 6.13621985e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0585 # 30-Dec-13 # -3.951550e+004 # -4.415130e-001 # 1.282560e-002 # 3.560600e-002 # 0.000000e+000 # 3.030045e+001 # -4.415690e-004 # 4.342710e-006 # 1.736800e-009 # 0.99994600 # -2.11246 # 0.000000e+000 # 1.288270e-002 # -8.164490e+000 # # # # # # 2449 # 06-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.35517974e-003 # 6.43485967e-004 # 2.33381062e-005 # 2.21338578e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2399 # 17-Jan-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.08277491e+001 # 1.61475240e+000 # 1.24520243e-003 # 1.93505039e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1119 # 21-Jan-14 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.4901e-001 # -0.5263 # -1.9196e-003 # 8.5361e-005 # -1.2856e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.0400 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # # # # 3685 # # # 2 # 0.000 # # # # # # # # # 0851 # Sept 4th 2014 # 4.6134 # 2.5497 # # # # # # # datcnv_date = Aug 06 2015 12:15:25, 7.23.2 [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2015-15\RAW\CTD\2015-15-0215.hex P:\Crui se_Data_Processing\2015-15\Processing\doc\2015-15-ctd.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Nov 16 2015 17:18:09, 7.23.2 # wildedit_in = P:\Cruise_Data_Processing\2015-15\Processing\convert\2015-15-021 5.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # celltm_date = Nov 16 2015 17:21:24, 7.23.2 # celltm_in = P:\Cruise_Data_Processing\2015-15\Processing\wildedit\2015-15-0215 .cnv # celltm_alpha = 0.0245, 0.0245 # celltm_tau = 9.5000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Nov 16 2015 17:27:45, 7.23.2 [derive_vars = 2] # Derive_in = P:\Cruise_Data_Processing\2015-15\Processing\celltm\2015-15-0215.c nv P:\Cruise_Data_Processing\2015-15\Processing\doc\2015-15-ctd.XMLCON # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove a few records near the top and bottom of the cast; salinity was cleaned very lightly. ---------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Fluorescence and pH data are nominal and unedited except that some records were removed in editing temperature and salinity. Recalibration of channel Salinity:T0:C0 was based on a post-cruise calibration and a comparison with bottle samples. Stops for bottles were often very short and there was a cruise between this one and the post-cruise calibration, but the salinity is likely good to +/- 0.002. A dissolved oxygen sensor was mounted but no data were acquired. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were collected. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see the report: 2015-15_Processing_Report.doc. ---------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (-0.2E-02 1) $END !--1--- ---2---- ---3--- ---4--- ---5---- -6-- !Pressu Temperat Fluores pH:SBE: Salinity Numb !re ure: cence: Nominal :T0:C0 er_o ! Primary URU: ~bin ! Seapoin _rec ! t ords !------ -------- ------- ------- -------- ---- *END OF HEADER 4.2 10.6972 0.380 7.714 31.2094 13 4.9 10.6831 0.334 7.715 31.2187 29 6.0 10.6175 0.310 7.717 31.2612 20 7.1 10.5941 0.267 7.716 31.2757 27 8.0 10.3629 0.293 7.714 31.4028 28 9.0 10.3460 0.304 7.714 31.4067 27 10.0 10.3348 0.362 7.714 31.4090 27 11.0 10.3031 0.415 7.714 31.4221 27 12.0 10.3135 0.497 7.715 31.4170 24 13.0 10.3132 0.558 7.718 31.4168 24 14.0 10.3123 0.440 7.719 31.4175 24 15.0 10.3032 0.531 7.719 31.4224 24 16.0 10.2875 0.559 7.721 31.4304 23 17.0 10.2714 0.583 7.724 31.4391 24 18.0 10.2633 0.613 7.724 31.4447 24 19.0 10.2460 0.551 7.724 31.4576 24 20.0 10.2286 0.623 7.724 31.4707 25 21.0 10.2038 0.523 7.724 31.4895 23 22.0 10.1839 0.511 7.724 31.5039 23 23.0 10.1729 0.558 7.724 31.5114 24 24.0 10.1533 0.506 7.724 31.5246 23 25.0 10.1441 0.506 7.724 31.5311 23 26.0 10.1163 0.606 7.724 31.5507 26 27.0 10.1032 0.525 7.724 31.5593 25 28.0 10.0837 0.620 7.724 31.5726 27 29.0 10.0723 0.647 7.724 31.5799 27 30.0 10.0496 0.549 7.723 31.5948 23 31.0 9.9965 0.567 7.720 31.6304 26 32.0 9.9881 0.535 7.720 31.6358 25 33.0 9.9760 0.478 7.720 31.6448 25 34.0 9.9308 0.495 7.720 31.6766 25 35.0 9.9294 0.580 7.715 31.6773 20 36.0 9.9270 0.448 7.717 31.6790 24 37.0 9.9193 0.458 7.715 31.6849 26 38.0 9.9152 0.506 7.716 31.6873 26 39.0 9.9130 0.499 7.715 31.6892 24 40.0 9.9082 0.610 7.715 31.6930 26 41.0 9.9098 0.582 7.715 31.6923 25 42.0 9.9099 0.425 7.715 31.6927 25 43.0 9.9099 0.467 7.715 31.6942 24 44.0 9.9091 0.433 7.715 31.6966 24 45.0 9.9096 0.506 7.715 31.6992 25 46.0 9.9095 0.495 7.715 31.7002 26 47.0 9.9098 0.533 7.716 31.6996 26 48.0 9.9089 0.559 7.715 31.6986 25 49.0 9.9088 0.499 7.716 31.7005 26 50.0 9.9087 0.535 7.715 31.7017 25 51.0 9.9093 0.453 7.716 31.7022 26 52.0 9.9099 0.594 7.715 31.7029 26 53.0 9.9064 0.680 7.716 31.7062 26 54.0 9.8966 0.559 7.716 31.7150 26 55.0 9.8947 0.563 7.716 31.7166 25 56.0 9.9007 0.481 7.716 31.7119 25 57.0 9.8800 0.581 7.716 31.7299 25 58.0 9.8746 0.532 7.716 31.7336 27 59.0 9.7814 0.518 7.715 31.8069 26 60.0 9.6638 0.560 7.712 31.8956 27 61.0 9.5168 0.494 7.707 31.9979 27 62.0 9.3584 0.435 7.701 32.0959 26 63.0 9.1925 0.422 7.695 32.1955 27 64.0 9.1398 0.448 7.690 32.2247 27 65.0 9.0908 0.409 7.686 32.2533 25 66.0 9.0742 0.432 7.684 32.2632 27 67.0 9.0643 0.449 7.681 32.2689 28 68.0 9.0544 0.446 7.680 32.2757 27 69.0 9.0480 0.431 7.679 32.2799 26 70.0 9.0403 0.410 7.676 32.2853 27 71.0 9.0233 0.330 7.675 32.2954 27 72.0 9.0224 0.409 7.675 32.2962 29 73.0 9.0177 0.376 7.674 32.2995 28 74.0 9.0016 0.457 7.671 32.3109 28 75.0 8.9946 0.390 7.671 32.3159 26 76.0 8.9930 0.357 7.670 32.3173 25 77.0 8.9925 0.411 7.670 32.3181 26 78.0 8.9890 0.362 7.670 32.3209 24 79.0 8.9843 0.320 7.670 32.3242 27 80.0 8.9837 0.391 7.670 32.3247 26 81.0 8.9797 0.317 7.669 32.3284 26 82.0 8.9793 0.359 7.668 32.3288 26 83.0 8.9734 0.380 7.668 32.3342 26 84.0 8.9321 0.332 7.666 32.3705 25 85.0 8.8921 0.293 7.666 32.4045 21 86.0 8.8921 0.295 7.666 32.4042 25 87.0 8.8921 0.300 7.666 32.4041 24 88.0 8.8787 0.282 7.665 32.4151 26 89.0 8.8375 0.246 7.663 32.4496 25 90.0 8.8141 0.242 7.662 32.4692 25 91.0 8.7298 0.190 7.662 32.5442 21 92.0 8.7034 0.166 7.662 32.5670 23 93.0 8.6856 0.123 7.659 32.5824 23 94.0 8.6720 0.133 7.658 32.5956 25 95.0 8.6572 0.167 7.657 32.6137 20 96.0 8.6557 0.147 7.657 32.6155 25 97.0 8.6511 0.133 7.657 32.6201 23 98.0 8.6405 0.129 7.657 32.6300 23 99.0 8.6030 0.153 7.657 32.6653 22 100.0 8.5850 0.146 7.656 32.6814 24 101.0 8.5090 0.133 7.655 32.7437 24 102.0 8.4478 0.122 7.653 32.7932 24 103.0 8.3909 0.136 7.652 32.8336 25 104.0 8.3745 0.145 7.648 32.8435 25 105.0 8.3214 0.137 7.648 32.8764 20 106.0 8.2499 0.211 7.644 32.9229 22 107.0 8.1994 0.177 7.643 32.9521 23 108.0 8.1299 0.145 7.638 32.9934 25 109.0 7.9925 0.193 7.632 33.0754 26 110.0 7.8745 0.211 7.626 33.1424 25 111.0 7.8294 0.192 7.621 33.1690 25 112.0 7.8161 0.167 7.618 33.1762 25 113.0 7.8117 0.173 7.616 33.1791 25 114.0 7.8065 0.190 7.612 33.1826 25 115.0 7.7973 0.196 7.612 33.1885 24 116.0 7.7981 0.194 7.610 33.1886 25 117.0 7.7894 0.193 7.608 33.1941 26 118.0 7.7774 0.246 7.607 33.2018 25 119.0 7.7756 0.209 7.607 33.2031 26 120.0 7.7731 0.200 7.605 33.2052 25 121.0 7.7488 0.217 7.603 33.2203 24 122.0 7.7493 0.301 7.602 33.2199 24 123.0 7.7466 0.243 7.602 33.2218 25 124.0 7.7320 0.236 7.600 33.2315 25 125.0 7.7281 0.213 7.598 33.2340 25 126.0 7.7224 0.230 7.598 33.2379 26 127.0 7.7141 0.233 7.597 33.2439 26 128.0 7.7047 0.226 7.597 33.2505 26 129.0 7.6902 0.183 7.595 33.2609 25 130.0 7.6664 0.220 7.593 33.2778 24 131.0 7.6310 0.203 7.593 33.3023 26 132.0 7.6290 0.187 7.593 33.3035 26 133.0 7.6288 0.185 7.591 33.3036 23 134.0 7.6285 0.179 7.589 33.3042 26 135.0 7.6114 0.179 7.588 33.3161 27 136.0 7.6028 0.152 7.588 33.3219 27 137.0 7.5787 0.208 7.587 33.3382 25 138.0 7.5643 0.239 7.585 33.3473 24 139.0 7.5629 0.212 7.584 33.3481 23 140.0 7.5685 0.189 7.584 33.3447 26 141.0 7.5633 0.183 7.584 33.3482 26 142.0 7.5483 0.207 7.584 33.3575 26 143.0 7.5285 0.196 7.582 33.3703 25 144.0 7.5209 0.178 7.580 33.3752 25 145.0 7.5045 0.168 7.579 33.3867 20 146.0 7.4884 0.218 7.579 33.3976 25 147.0 7.4828 0.202 7.579 33.4012 25 148.0 7.4618 0.196 7.577 33.4156 25 149.0 7.4281 0.244 7.575 33.4382 26 150.0 7.4185 0.217 7.574 33.4442 27 151.0 7.4214 0.243 7.574 33.4421 28 152.0 7.4227 0.236 7.573 33.4416 24 153.0 7.3965 0.227 7.572 33.4590 26 154.0 7.3995 0.233 7.571 33.4570 25 155.0 7.3969 0.210 7.570 33.4589 25 156.0 7.3891 0.367 7.570 33.4643 26 157.0 7.3795 0.318 7.570 33.4706 25 158.0 7.3845 0.255 7.570 33.4675 27 159.0 7.3463 0.238 7.568 33.4927 29 160.0 7.3179 0.229 7.566 33.5105 35 160.5 7.2430 0.264 7.565 33.5580 3