*2014/07/21 12:00:46.13 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2014/04/09 21:40:38.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 41 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : DF9FF801 NUMBER OF CHANNELS : 11 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 2 42 2 Temperature:Secondary 'deg C (ITS90)' 7.7776 8.8985 3 Transmissivity %/metre 27.9 54.3 4 Fluorescence:URU:Wetlabs mg/m^3 1.157 8.881 5 PAR uE/m^2/sec 0.19E-01 403.312 6 PAR:Reference uE/m^2/sec 30.07 264.759 7 pH:SBE:Nominal n/a 7.64 8.14 8 Salinity:T1:C1 PSS-78 29.0469 29.8715 9 Oxygen:Dissolved:SBE mL/L 4.404 8.413 10 Oxygen:Dissolved:SBE umol/kg 192.1 367.3 11 Number_of_bin_records n/a 19 301 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 6 F ' ' 1 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 7 F ' ' 1 6 -99 ' ' 7 F ' ' 1 7 -99 ' ' 8 F ' ' 3 8 -99 ' ' 9 F ' ' 4 9 -99 ' ' 7 F ' ' 2 10 -99 ' ' 6 F ' ' 1 11 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2014-27\Pro $END *ADMINISTRATION MISSION : 2014-27 AGENCY : 'WVL, Marine Environment and Habitat Science,' CONTINUED : ' Vancouver, B.C.' COUNTRY : Canada PROJECT : PARR Shellfish Carrying Capacity SCIENTIST : Sutherland T. PLATFORM : Vector *LOCATION GEOGRAPHIC AREA : Strait of Georgia STATION : 5 EVENT NUMBER : 37 LATITUDE : 49 35.83000 N ! (deg min) LONGITUDE : 124 51.55000 W ! (deg min) WATER DEPTH : 41 ALTIMETER (M) : 2 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------------- -------------- ---------- Temperature ' ' 4054 Conductivity ' ' 1766 'Pressure:Digiquartz with TC' ' ' 0585 Temperature:2 ' ' 4700 Conductivity:2 ' ' 3321 'Oxygen:SBE 43' ' ' 1119 'Fluorometer:WET Labs ECO-AFL/FL' ' ' 2216 Altimeter ' ' 1204 'Transmissometer:WET Labs C-Star' ' ' 1396DR pH ' ' 0692 PAR/Irradiance:Biospherical/Licor ' ' 4615 Unavailable ' ' ' ' $END $REMARKS SOFTWARE VERSION SEASAVE V 7.23.1 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.4.1 2014/06/26 17:28:01 12594 12594 CLEAN 5.1 2014/06/26 17:33:54 12594 12594 SHIFTDAT 3.4 2014/06/27 11:24:18 12594 12594 SHIFTDAT 3.4 2014/06/27 11:26:18 12594 12594 SHIFTDAT 3.4 2014/06/27 11:28:15 12594 12594 SHIFTDAT 3.4 2014/06/27 11:30:15 12594 12594 DELETE 6.3 2014/06/27 11:31:59 12594 2066 CTDEDIT 5.0.4 2014/07/10 14:45:52 2066 2003 CALIB 11.8 2014/07/11 09:42:20 2003 2003 FILTERS 4.3 2014/07/11 10:29:26 2003 2003 BINAVE 4.1.1 2014/07/11 10:29:55 2003 41 REMOVECH 8.2 2014/07/11 10:51:52 41 41 CHGUNITS 3.1 2014/07/11 13:10:49 41 41 REORDER 1.3 2014/07/11 13:10:53 ? ? CALIB 11.8 2014/07/21 12:00:02 41 41 HDREDIT2 2.6 2014/07/21 12:00:46 ? ? $END $REMARKS -CLEAN functions: 2014/06/26 17:33:07 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 70.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.70 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.60 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 31.76 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2014/07/10 14:45:52 63 records were deleted in this editing session. No data values were changed. -CALIB parameters: 2014/07/11 09:42:20 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2014-27\Processing\doc\2014-27-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 17 Oxygen:Dissolved:SBE mL/L 10 0.7440000E-01 0.1030000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Wetlabs:ECO-AFL -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2014/07/11 10:51:52 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Status:Pump Altimeter [metres] Salinity:T0:C0 [PSS-78] Descent_Rate [m/s] Flag -CHANGE units: Temperature reference channel: Tem* Salinity reference channel: Sal* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -CALIB parameters: 2014/07/21 12:00:02 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2014-27\Processing\doc\2014-27-recal2.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 8 Salinity:T1:C1 PSS-78 10 -0.4200000E-02 0.1000000E+01 -HEADER EDITS: 2014/07/21 12:00:46 Applied edit header: P:\Cruise_Data_Processing\2014-27\Processing\doc\2014-27-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 5: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 9: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 6: PAR:Reference [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 7: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a Channel 4: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:URU:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\CTD Data\2014-27\2014-27-0037.hex Software Version Seasave V 7.23.1 Temperature SN = 4054 Conductivity SN = 1766 Number of Bytes Per Scan = 40 Number of Voltage Words = 5 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Apr 09 2014 14:42:28 NMEA Latitude = 49 35.83 N NMEA Longitude = 124 51.55 W NMEA UTC (Time) = Apr 09 2014 21:40:38 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 surface PAR voltage added to scan A/D offset = 0 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ship: Vector Station: 5 Depth: 41 System UTC = Apr 09 2014 21:42:28 # nquan = 19 # nvalues = 12594 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = CStarTr0: Beam Transmission, WET Labs C-Star [%] # name 7 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 8 = sbeox0V: Oxygen raw, SBE 43 [V] # name 9 = ph: pH # name 10 = par: PAR/Irradiance, Biospherical/Licor # name 11 = spar: SPAR/Surface Irradiance # name 12 = pumps: Pump Status # name 13 = altM: Altimeter [m] # name 14 = sal00: Salinity, Practical [PSU] # name 15 = sal11: Salinity, Practical, 2 [PSU] # name 16 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 0.5 # name 17 = dz/dtM: Descent Rate [m/s], WS = 0.5 # name 18 = flag: flag # span 0 = 1, 12594 # span 1 = 1.625, 41.762 # span 2 = 7.7653, 9.2918 # span 3 = 7.7668, 9.2787 # span 4 = 3.116083, 3.145786 # span 5 = 3.119944, 3.145389 # span 6 = 68.6754, 86.7112 # span 7 = 0.6668, 22.2542 # span 8 = 1.8315, 3.6239 # span 9 = 7.607, 8.219 # span 10 = 1.2757e-02, 1.5597e+03 # span 11 = 2.7972e+01, 1.2215e+03 # span 12 = 0, 1 # span 13 = 0.00, 100.00 # span 14 = 28.6519, 29.8788 # span 15 = 28.6233, 29.8820 # span 16 = 3.97059, 9.41790 # span 17 = -0.796, 1.074 # span 18 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Apr 09 2014 21:40:38 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 4054 # 31-Dec-13 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.38585377e-003 # 6.43366473e-004 # 2.25191320e-005 # 1.97883875e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1766 # 01-Jan-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.12664129e+000 # 4.87898554e-001 # -5.45044785e-004 # 5.02313229e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0585 # 30-Dec-13 # -3.951550e+004 # -4.415130e-001 # 1.282560e-002 # 3.560600e-002 # 0.000000e+000 # 3.030045e+001 # -4.415690e-004 # 4.342710e-006 # 1.736800e-009 # 0.99994600 # -2.11246 # 0.000000e+000 # 1.288270e-002 # -8.164490e+000 # # # # # # 4700 # 04-Jan-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.34747980e-003 # 6.38304641e-004 # 2.11616937e-005 # 1.81105503e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3321 # 03-Jan-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -9.95375471e+000 # 1.44611380e+000 # 5.60137697e-004 # 3.39531619e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 1119 # 21-Jan-14 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.4901e-001 # -0.5263 # -1.9196e-003 # 8.5361e-005 # -1.2856e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.0400 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # # 1.30000000e+001 # # 0.0415 # # # # # # 1204 # # 15.000 # 0.000 # # # # # # # # # 1396DR # 5 Feb 2014 # 19.0844 # -0.0191 # 0.250 # # # # # # # # # 0692 # 14 Jan 2014 # 4.6282 # 2.5370 # # # # # # 4615 # 16 March 2011 # 1.00000000 # 0.00000000 # 3367003367.00000000 # 1.00000000 # -0.40341896 # # # # # # # # # 16504 # 16-MAR-2011 # 1527.28000000 # 1.00000000 # # # # datcnv_date = Jun 26 2014 09:26:17, 7.22.5 [datcnv_vars = 14] # datcnv_in = P:\Cruise_Data_Processing\2014-27\RAW\CTD\2014-27-0037.hex P:\Crui se_Data_Processing\2014-27\Processing\doc\2014-27-ctd.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Jun 26 2014 11:32:39, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2014-27\Processing\convert\2014-27-003 7.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m spar # wildedit_excl_bad_scans = yes # alignctd_date = Jun 26 2014 11:34:04, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2014-27\Processing\wildedit\2014-27-00 37.cnv # alignctd_adv = sbeox0V 2.500 # celltm_date = Jun 26 2014 11:35:15, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2014-27\Processing\align\2014-27-0037.cn v # celltm_alpha = 0.0200, 0.0245 # celltm_tau = 9.0000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Jun 26 2014 11:38:38, 7.22.5 [derive_vars = 4] # Derive_in = P:\Cruise_Data_Processing\2014-27\Processing\celltm\2014-27-0037.c nv P:\Cruise_Data_Processing\2014-27\Processing\doc\2014-27-ctd.xmlcon # derive_time_window_docdt = seconds: 0.5 # derive_ox_tau_correction = yes # derive_time_window_dzdt = seconds: 0.5 # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove a few surface records and some records corrupted by shed wakes. --------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Transmissivity, Fluorescence, pH, PAR and Reference PAR data are nominal and unedited except that some records were removed in editing temperature and salinity. For details on how the transmissivity calibration parameters were calculated see the document in folder "\cruise_data\documents\transmissivity". The Oxygen:Dissolved:SBE data are considered, very roughly, to be: ±0.5 mL/L from 0 to 10db ±0.4 mL/L from 10 to 50db ±0.1 mL/L from 50 to 200db ±0.06 mL/L below 100db The PAR:Reference channel was removed from casts #1-2 as there was no signal; there are very low signals from other casts, which are suspicious, but they were left in place. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. NOTE: The salinity was recalibrated to bring the Salinity:T1:C1 channel into agreement with Salinity:T0:C0 based on observations during later offshore cruises that found the Salinity:T0:C0 was very close to bottles. For details on the processing see the report: 2014-27_Processing_Report.doc. --------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- -------- ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.744E-01 1.03) Salinity:T1:C1 PSS-78 10 -99 () (-0.42E-02 1) $END !--1--- ---2---- --3-- ---4--- --5--- --6--- ---7--- ---8---- --9--- --10- -11- !Pressu Temperat Trans Fluores PAR PAR: pH:SBE: Salinity Oxygen Oxyge Numb !re ure: missi cence: Refere Nominal :T1:C1 : n: er_o ! Secondar vity URU: nce Dissol Disso ~bin ! y Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ----- ------- ------ ------ ------- -------- ------ ----- ---- *END OF HEADER 2.0 8.8985 27.9 8.009 403.3 34.2 8.140 29.0469 8.41 367.3 25 3.0 8.6936 29.4 7.951 297.4 46.4 8.100 29.2383 8.03 350.4 44 4.0 8.4934 31.3 8.400 183.1 75.2 8.066 29.4237 7.44 324.8 34 5.0 8.4540 33.9 8.423 116.2 47.3 8.055 29.4781 7.17 312.7 29 6.0 8.4418 36.1 8.881 76.3 37.2 8.038 29.5091 7.07 308.3 24 7.0 8.4022 38.2 8.246 51.3 73.5 8.018 29.5182 7.00 305.7 25 8.0 8.3730 38.4 7.647 35.5 79.6 7.987 29.5255 6.85 299.0 25 9.0 8.2628 38.4 6.406 25.2 58.7 7.967 29.5793 6.54 285.3 24 10.0 8.2075 39.0 6.250 18.0 39.8 7.958 29.6097 6.34 276.7 25 11.0 8.2215 40.2 6.310 12.9 44.4 7.948 29.6316 6.33 276.1 19 12.0 8.2104 43.2 5.597 9.4 32.2 7.939 29.6629 6.28 274.2 25 13.0 8.1857 45.0 5.278 7.0 40.3 7.928 29.6772 6.23 271.7 24 14.0 8.1800 46.5 5.184 5.4 40.8 7.915 29.6899 6.16 269.0 25 15.0 8.1536 46.9 4.080 4.3 30.1 7.905 29.7018 6.07 264.9 19 16.0 8.0814 48.0 3.864 3.4 71.6 7.896 29.7262 5.94 259.1 25 17.0 8.0713 49.6 3.619 2.7 79.6 7.887 29.7411 5.87 256.3 25 18.0 8.0624 50.5 3.273 2.2 37.1 7.877 29.7483 5.82 253.9 25 19.0 8.0600 50.9 2.960 1.8 97.2 7.867 29.7603 5.78 252.4 25 20.0 8.0537 51.6 2.389 1.5 86.5 7.858 29.7707 5.76 251.1 25 21.0 8.0425 52.5 2.507 1.2 83.8 7.849 29.7747 5.72 249.4 25 22.0 8.0256 52.9 2.667 1.0 66.0 7.842 29.7806 5.69 248.4 25 23.0 8.0310 53.6 2.386 0.8 86.7 7.835 29.7944 5.67 247.2 25 24.0 8.0240 53.7 1.913 0.7 102.0 7.827 29.8003 5.64 246.0 25 25.0 8.0165 53.5 1.840 0.6 44.4 7.821 29.8008 5.62 245.2 26 26.0 8.0147 53.6 1.847 0.5 54.2 7.814 29.8022 5.59 243.8 25 27.0 8.0140 53.7 1.813 0.4 74.1 7.809 29.8072 5.57 243.1 25 28.0 8.0040 54.2 1.827 0.3 84.4 7.803 29.8127 5.55 242.1 25 29.0 7.9762 54.1 1.549 0.3 63.5 7.793 29.8244 5.48 239.0 25 30.0 7.9358 54.3 1.469 0.2 65.0 7.782 29.8297 5.35 233.4 25 31.0 7.8990 53.2 1.571 0.2 45.8 7.774 29.8302 5.18 226.1 25 32.0 7.8933 48.7 1.371 0.2 38.0 7.767 29.8334 5.19 226.5 26 33.0 7.8910 47.9 1.469 0.1 46.5 7.757 29.8376 5.25 229.2 44 34.0 7.8479 49.3 1.695 0.1 67.7 7.735 29.8399 5.17 225.7 46 35.0 7.8021 51.4 1.309 0.1 58.4 7.705 29.8426 4.94 215.7 109 36.0 7.7944 51.0 1.273 0.1 141.3 7.684 29.8468 4.85 211.5 301 37.0 7.7889 48.0 1.236 0.1 63.5 7.668 29.8550 4.72 205.8 158 38.0 7.7858 45.3 1.223 0.0 50.5 7.663 29.8619 4.62 201.6 125 39.0 7.7838 42.3 1.179 0.0 93.7 7.659 29.8656 4.54 198.1 126 40.0 7.7822 41.8 1.159 0.0 264.8 7.655 29.8667 4.51 196.8 127 41.0 7.7803 41.4 1.182 0.0 173.7 7.651 29.8688 4.47 195.1 128 42.0 7.7776 40.7 1.157 0.0 165.7 7.640 29.8715 4.40 192.1 27