*2014/07/21 12:00:45.78 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2014/04/09 16:15:19.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 40 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : DAFAB07C NUMBER OF CHANNELS : 11 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 3 42 2 Temperature:Secondary 'deg C (ITS90)' 7.8121 8.8555 3 Transmissivity %/metre 38.4 53.2 4 Fluorescence:URU:Wetlabs mg/m^3 1.425 5.689 5 PAR uE/m^2/sec 0.23E-01 395.952 6 PAR:Reference uE/m^2/sec 818.588 948.691 7 pH:SBE:Nominal n/a 7.709 8.043 8 Salinity:T1:C1 PSS-78 29.3325 29.8685 9 Oxygen:Dissolved:SBE mL/L 4.63 7.157 10 Oxygen:Dissolved:SBE umol/kg 202 312.4 11 Number_of_bin_records n/a 12 122 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 6 F ' ' 1 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 7 F ' ' 1 6 -99 ' ' 7 F ' ' 1 7 -99 ' ' 8 F ' ' 3 8 -99 ' ' 9 F ' ' 4 9 -99 ' ' 7 F ' ' 2 10 -99 ' ' 6 F ' ' 1 11 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2014-27\Pro $END *ADMINISTRATION MISSION : 2014-27 AGENCY : 'WVL, Marine Environment and Habitat Science,' CONTINUED : ' Vancouver, B.C.' COUNTRY : Canada PROJECT : PARR Shellfish Carrying Capacity SCIENTIST : Sutherland T. PLATFORM : Vector *LOCATION GEOGRAPHIC AREA : Strait of Georgia STATION : 11 EVENT NUMBER : 25 LATITUDE : 49 32.17000 N ! (deg min) LONGITUDE : 124 50.51000 W ! (deg min) WATER DEPTH : 40 ALTIMETER (M) : 3 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------------- -------------- ---------- Temperature ' ' 4054 Conductivity ' ' 1766 'Pressure:Digiquartz with TC' ' ' 0585 Temperature:2 ' ' 4700 Conductivity:2 ' ' 3321 'Oxygen:SBE 43' ' ' 1119 'Fluorometer:WET Labs ECO-AFL/FL' ' ' 2216 Altimeter ' ' 1204 'Transmissometer:WET Labs C-Star' ' ' 1396DR pH ' ' 0692 PAR/Irradiance:Biospherical/Licor ' ' 4615 Unavailable ' ' ' ' $END $REMARKS SOFTWARE VERSION SEASAVE V 7.23.1 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.4.1 2014/06/26 17:27:49 12120 12120 CLEAN 5.1 2014/06/26 17:33:43 12120 12120 SHIFTDAT 3.4 2014/06/27 11:24:08 12120 12120 SHIFTDAT 3.4 2014/06/27 11:26:07 12120 12120 SHIFTDAT 3.4 2014/06/27 11:28:05 12120 12120 SHIFTDAT 3.4 2014/06/27 11:30:04 12120 12120 DELETE 6.3 2014/06/27 11:31:52 12120 1788 CTDEDIT 5.0.4 2014/07/10 14:23:27 1788 1686 CALIB 11.8 2014/07/11 09:42:17 1686 1686 FILTERS 4.3 2014/07/11 10:29:23 1686 1686 BINAVE 4.1.1 2014/07/11 10:29:53 1686 40 REMOVECH 8.2 2014/07/11 10:51:51 40 40 CHGUNITS 3.1 2014/07/11 13:10:49 40 40 REORDER 1.3 2014/07/11 13:10:53 ? ? CALIB 11.8 2014/07/21 12:00:01 40 40 HDREDIT2 2.6 2014/07/21 12:00:45 ? ? $END $REMARKS -CLEAN functions: 2014/06/26 17:33:07 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 70.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.70 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.60 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 32.06 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2014/07/10 14:23:27 102 records were deleted in this editing session. No data values were changed. -CALIB parameters: 2014/07/11 09:42:17 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2014-27\Processing\doc\2014-27-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 17 Oxygen:Dissolved:SBE mL/L 10 0.7440000E-01 0.1030000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:URU:Wetlabs:ECO-AFL -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2014/07/11 10:51:51 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Status:Pump Altimeter [metres] Salinity:T0:C0 [PSS-78] Descent_Rate [m/s] Flag -CHANGE units: Temperature reference channel: Tem* Salinity reference channel: Sal* 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -CALIB parameters: 2014/07/21 12:00:01 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2014-27\Processing\doc\2014-27-recal2.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 8 Salinity:T1:C1 PSS-78 10 -0.4200000E-02 0.1000000E+01 -HEADER EDITS: 2014/07/21 12:00:45 Applied edit header: P:\Cruise_Data_Processing\2014-27\Processing\doc\2014-27-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 5: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 9: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 6: PAR:Reference [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 7: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a Channel 4: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:URU:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\CTD Data\2014-27\2014-27-0025.hex Software Version Seasave V 7.23.1 Temperature SN = 4054 Conductivity SN = 1766 Number of Bytes Per Scan = 40 Number of Voltage Words = 5 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Apr 09 2014 09:16:23 NMEA Latitude = 49 32.17 N NMEA Longitude = 124 50.51 W NMEA UTC (Time) = Apr 09 2014 16:15:19 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 surface PAR voltage added to scan A/D offset = 0 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ship: Vector Station: 11 Depth: 40 System UTC = Apr 09 2014 16:16:23 # nquan = 19 # nvalues = 12120 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = CStarTr0: Beam Transmission, WET Labs C-Star [%] # name 7 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 8 = sbeox0V: Oxygen raw, SBE 43 [V] # name 9 = ph: pH # name 10 = par: PAR/Irradiance, Biospherical/Licor # name 11 = spar: SPAR/Surface Irradiance # name 12 = pumps: Pump Status # name 13 = altM: Altimeter [m] # name 14 = sal00: Salinity, Practical [PSU] # name 15 = sal11: Salinity, Practical, 2 [PSU] # name 16 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 0.5 # name 17 = dz/dtM: Descent Rate [m/s], WS = 0.5 # name 18 = flag: flag # span 0 = 1, 12120 # span 1 = 1.860, 42.061 # span 2 = 7.8087, 9.2337 # span 3 = 7.8095, 9.2136 # span 4 = 3.125264, 3.172523 # span 5 = 3.125616, 3.173419 # span 6 = 77.6001, 85.8490 # span 7 = -0.5395, 64.4605 # span 8 = 1.9621, 2.9170 # span 9 = 7.678, 8.079 # span 10 = 2.1028e-02, 1.0315e+03 # span 11 = 7.0676e+02, 1.2103e+03 # span 12 = 0, 1 # span 13 = 0.00, 100.00 # span 14 = 28.9036, 29.8710 # span 15 = 28.9481, 29.8758 # span 16 = 4.38015, 7.12302 # span 17 = -0.714, 1.063 # span 18 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Apr 09 2014 16:15:19 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 4054 # 31-Dec-13 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.38585377e-003 # 6.43366473e-004 # 2.25191320e-005 # 1.97883875e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1766 # 01-Jan-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.12664129e+000 # 4.87898554e-001 # -5.45044785e-004 # 5.02313229e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0585 # 30-Dec-13 # -3.951550e+004 # -4.415130e-001 # 1.282560e-002 # 3.560600e-002 # 0.000000e+000 # 3.030045e+001 # -4.415690e-004 # 4.342710e-006 # 1.736800e-009 # 0.99994600 # -2.11246 # 0.000000e+000 # 1.288270e-002 # -8.164490e+000 # # # # # # 4700 # 04-Jan-14 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.34747980e-003 # 6.38304641e-004 # 2.11616937e-005 # 1.81105503e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3321 # 03-Jan-14 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -9.95375471e+000 # 1.44611380e+000 # 5.60137697e-004 # 3.39531619e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 1119 # 21-Jan-14 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.4901e-001 # -0.5263 # -1.9196e-003 # 8.5361e-005 # -1.2856e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.0400 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # # 1.30000000e+001 # # 0.0415 # # # # # # 1204 # # 15.000 # 0.000 # # # # # # # # # 1396DR # 5 Feb 2014 # 19.0844 # -0.0191 # 0.250 # # # # # # # # # 0692 # 14 Jan 2014 # 4.6282 # 2.5370 # # # # # # 4615 # 16 March 2011 # 1.00000000 # 0.00000000 # 3367003367.00000000 # 1.00000000 # -0.40341896 # # # # # # # # # 16504 # 16-MAR-2011 # 1527.28000000 # 1.00000000 # # # # datcnv_date = Jun 26 2014 09:26:11, 7.22.5 [datcnv_vars = 14] # datcnv_in = P:\Cruise_Data_Processing\2014-27\RAW\CTD\2014-27-0025.hex P:\Crui se_Data_Processing\2014-27\Processing\doc\2014-27-ctd.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Jun 26 2014 11:32:36, 7.22.5 # wildedit_in = P:\Cruise_Data_Processing\2014-27\Processing\convert\2014-27-002 5.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m spar # wildedit_excl_bad_scans = yes # alignctd_date = Jun 26 2014 11:34:02, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2014-27\Processing\wildedit\2014-27-00 25.cnv # alignctd_adv = sbeox0V 2.500 # celltm_date = Jun 26 2014 11:35:12, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2014-27\Processing\align\2014-27-0025.cn v # celltm_alpha = 0.0200, 0.0245 # celltm_tau = 9.0000, 9.5000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Jun 26 2014 11:38:35, 7.22.5 [derive_vars = 4] # Derive_in = P:\Cruise_Data_Processing\2014-27\Processing\celltm\2014-27-0025.c nv P:\Cruise_Data_Processing\2014-27\Processing\doc\2014-27-ctd.xmlcon # derive_time_window_docdt = seconds: 0.5 # derive_ox_tau_correction = yes # derive_time_window_dzdt = seconds: 0.5 # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some surface records and some records corrupted by shed wakes. --------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Transmissivity, Fluorescence, pH, PAR and Reference PAR data are nominal and unedited except that some records were removed in editing temperature and salinity. For details on how the transmissivity calibration parameters were calculated see the document in folder "\cruise_data\documents\transmissivity". The Oxygen:Dissolved:SBE data are considered, very roughly, to be: ±0.5 mL/L from 0 to 10db ±0.4 mL/L from 10 to 50db ±0.1 mL/L from 50 to 200db ±0.06 mL/L below 100db The PAR:Reference channel was removed from casts #1-2 as there was no signal; there are very low signals from other casts, which are suspicious, but they were left in place. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. NOTE: The salinity was recalibrated to bring the Salinity:T1:C1 channel into agreement with Salinity:T0:C0 based on observations during later offshore cruises that found the Salinity:T0:C0 was very close to bottles. For details on the processing see the report: 2014-27_Processing_Report.doc. --------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- -------- ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.744E-01 1.03) Salinity:T1:C1 PSS-78 10 -99 () (-0.42E-02 1) $END !--1--- ---2---- --3-- ---4--- --5--- --6--- ---7--- ---8---- --9--- --10- -11- !Pressu Temperat Trans Fluores PAR PAR: pH:SBE: Salinity Oxygen Oxyge Numb !re ure: missi cence: Refere Nominal :T1:C1 : n: er_o ! Secondar vity URU: nce Dissol Disso ~bin ! y Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ----- ------- ------ ------ ------- -------- ------ ----- ---- *END OF HEADER 3.0 8.8555 39.4 5.085 396.0 856.4 8.043 29.3325 7.16 312.4 27 4.0 8.7290 40.2 4.337 329.5 847.8 8.038 29.4144 7.10 309.8 12 5.0 8.5729 40.4 4.902 211.3 836.9 8.034 29.5314 7.02 306.5 37 6.0 8.5255 40.8 5.117 146.0 852.1 8.029 29.5501 6.97 304.0 36 7.0 8.4292 40.3 5.556 102.5 829.3 8.019 29.5762 6.86 299.4 31 8.0 8.3078 40.6 5.689 72.0 818.6 8.002 29.6162 6.65 290.3 29 9.0 8.1853 40.9 4.914 51.0 828.1 7.994 29.6615 6.37 277.8 30 10.0 8.1493 43.0 4.570 36.6 836.7 7.981 29.6692 6.20 270.4 28 11.0 8.1405 45.5 4.451 26.8 849.1 7.968 29.6765 6.15 268.4 26 12.0 8.1763 46.2 3.991 19.9 850.4 7.954 29.6977 6.14 268.0 27 13.0 8.1531 47.5 3.937 14.9 853.7 7.939 29.7047 6.09 265.7 28 14.0 8.1378 47.8 3.766 11.4 870.9 7.929 29.7150 6.09 265.7 26 15.0 8.1633 46.4 3.584 8.8 872.0 7.923 29.7268 6.14 268.0 25 16.0 8.1626 45.0 3.628 6.8 870.6 7.918 29.7440 6.10 266.2 25 17.0 8.1217 45.5 3.441 5.3 878.3 7.912 29.7537 6.01 262.2 25 18.0 8.1267 48.3 3.202 4.1 879.9 7.906 29.7670 5.98 261.0 24 19.0 8.1305 49.3 2.858 3.2 867.9 7.900 29.7760 5.96 259.9 26 20.0 8.1206 49.8 2.904 2.6 826.9 7.895 29.7788 5.91 257.6 25 21.0 8.0889 49.8 2.468 2.1 845.9 7.890 29.7786 5.83 254.5 25 22.0 8.0684 50.1 2.423 1.7 846.8 7.882 29.7802 5.75 250.9 25 23.0 8.0290 50.5 2.372 1.4 851.6 7.877 29.7847 5.67 247.5 25 24.0 8.0293 50.8 2.353 1.1 850.9 7.870 29.8029 5.63 245.7 25 25.0 8.0193 50.8 2.307 0.9 881.2 7.862 29.8153 5.58 243.3 24 26.0 7.9802 52.5 2.560 0.7 887.5 7.854 29.8206 5.51 240.4 25 27.0 7.9711 52.7 2.180 0.6 879.8 7.845 29.8223 5.47 238.8 26 28.0 7.9613 52.9 1.842 0.5 879.6 7.836 29.8248 5.43 237.0 24 29.0 7.9305 53.2 1.776 0.4 869.8 7.827 29.8328 5.33 232.7 25 30.0 7.8868 52.9 1.987 0.3 879.8 7.818 29.8406 5.19 226.6 26 31.0 7.8620 50.9 1.996 0.3 893.8 7.808 29.8438 5.08 221.6 25 32.0 7.8572 48.1 1.852 0.2 891.5 7.795 29.8451 5.02 219.0 25 33.0 7.8556 46.8 1.522 0.2 890.0 7.785 29.8460 5.00 217.9 25 34.0 7.8552 46.7 1.425 0.2 902.3 7.772 29.8464 4.97 216.8 32 35.0 7.8552 44.5 1.633 0.1 866.2 7.759 29.8472 4.93 215.1 66 36.0 7.8549 42.9 1.486 0.1 861.1 7.747 29.8486 4.89 213.3 122 37.0 7.8514 42.4 1.556 0.1 870.2 7.737 29.8502 4.85 211.6 117 38.0 7.8483 42.4 1.543 0.1 848.6 7.730 29.8521 4.84 211.2 119 39.0 7.8400 42.4 1.722 0.0 879.7 7.724 29.8564 4.79 209.2 118 40.0 7.8320 40.4 1.746 0.0 899.3 7.719 29.8602 4.71 205.5 116 41.0 7.8184 38.8 1.718 0.0 948.7 7.714 29.8659 4.66 203.3 120 42.0 7.8121 38.4 1.489 0.0 947.5 7.709 29.8685 4.63 202.0 60