*2014/11/20 09:46:36.15 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2014/04/08 18:21:47.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 6 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : 5FCEC28E NUMBER OF CHANNELS : 26 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Bottle:Firing_Sequence n/a 1 6 2 Bottle_Number n/a 1 6 3 Pressure decibar 2.369 43.791 4 Temperature:Secondary 'deg C (ITS90)' 7.9615 8.3552 5 Transmissivity %/metre 41.9 59.4 6 Fluorescence:URU:Wetlabs mg/m^3 0.579 3.892 7 PAR uE/m^2/sec 0.34 187.261 8 PAR:Reference uE/m^2/sec 2104.777 2250.153 9 pH:SBE:Nominal n/a 7.744 7.965 10 Salinity:T1:C1 PSS-78 29.6836 30.1223 11 Oxygen:Dissolved:SBE mL/L 4.907 6.718 12 Oxygen:Dissolved:SBE umol/kg 214 293.2 13 Number_of_bin_records n/a 241 241 14 Sample_Number n/a 22 27 15 Temperature:Draw 'deg C (ITS90)' 10.8 12.4 16 Salinity:Bottle PSS-78 30.121 30.121 17 Flag:Salinity:Bottle n/a 18 Oxygen:Dissolved mL/L 4.947 6.727 19 Oxygen:Dissolved umol/kg 215.9 293.7 20 Flag:Oxygen:Dissolved n/a 21 Nitrate_plus_Nitrite umol/L 24.1 30.7 22 Flag:Nitrate_plus_Nitrite n/a 23 Silicate umol/L 45.9 61.1 24 Flag:Silicate n/a 25 Phosphate umol/L 2.06 2.58 26 Flag:Phosphate n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 3 I I 0 2 -99 ' ' 3 I I 0 3 -99 ' ' 7 F ' ' 1 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 6 F ' ' 1 6 -99 ' ' 8 F ' ' 3 7 -99 ' ' 7 F ' ' 1 8 -99 ' ' 7 F ' ' 1 9 -99 ' ' 8 F ' ' 3 10 -99 ' ' 9 F ' ' 4 11 -99 ' ' 7 F ' ' 2 12 -99 ' ' 6 F ' ' 1 13 ' ' ' ' 5 I I 0 14 -99 ' ' 5 I I 0 15 -99 ' ' 6 F R4 1 16 -99 ' ' 9 F R4 4 17 0 ' ' 3 NQ C ' ' 18 -99 ' ' 8 F R4 3 19 -99 ' ' 6 F ' ' 1 20 0 ' ' 3 NQ C ' ' 21 -99 ' ' 6 F R4 1 22 0 ' ' 3 NQ C ' ' 23 -99 ' ' 6 F R4 1 24 0 ' ' 3 NQ C ' ' 25 -99 ' ' 7 F R4 2 26 0 ' ' 3 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was collected but not analyzed. Sample lost. 2 = Acceptable Measurement 3 = Questionable Measurement (Probably Good) 4 = Poor Measurement (Probably Bad) 5 = Measurement Not Reported (Bad) 6 = Mean of replicate measurements 7 = Manual chromatographic peak measurement 8 = Irregular digital chromatographic peak integration 9 = Sample was planned for this measurement from this bottle but was not collected -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2014-27 AGENCY : 'WVL, Marine Environment and Habitat Science,' CONTINUED : ' Vancouver, B.C.' COUNTRY : Canada PROJECT : Strait of Georgia SCIENTIST : Sutherland T. PLATFORM : Vector *LOCATION GEOGRAPHIC AREA : Strait of Georgia STATION : 22 EVENT NUMBER : 7 LATITUDE : 49 28.28000 N ! (deg min) LONGITUDE : 124 41.67000 W ! (deg min) WATER DEPTH : 42 ALTIMETER (M) : 1.95 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------------------- -------------- ---------- Temperature ' ' 4054 Conductivity ' ' 1766 'Pressure:Digiquartz with TC' ' ' 0585 Temperature:2 ' ' 4700 Conductivity:2 ' ' 3321 'Oxygen:SBE 43' ' ' 1119 'Fluorometer:WET Labs ECO-AFL/FL' ' ' 2216 Altimeter ' ' 1204 'Transmissometer:WET Labs C-Star' ' ' 1396DR pH ' ' 0692 PAR/Irradiance:Biospherical/Licor ' ' 4615 Unavailable ' ' ' ' $END $REMARKS SOFTWARE VERSION SEASAVE V 7.23.1 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------ ------ ---------- -------- --------- --------- SBE_IOS 3.4.1 2014/06/26 10:39:59 1446 1446 CLEAN 5.1 2014/06/26 10:41:26 ? ? ADDSAMP 3.6 2014/06/26 11:14:21 1446 1446 BINAVE 4.1.1 2014/06/27 10:51:45 1446 6 MERGE 3.5 2014/06/27 10:52:00 6 6 CLEAN 5.1 2014/06/27 10:52:07 6 6 CALIB 11.8 2014/07/11 09:23:49 6 6 SORT 3.6 2014/07/11 09:55:19 6 6 REMOVECH 8.2 2014/07/11 12:49:15 6 6 CHGUNITS 3.1 2014/07/11 12:50:29 6 6 CHGUNITS 3.1 2014/07/11 12:50:44 6 6 REORDER 1.3 2014/07/11 12:52:49 ? ? CALIB 11.8 2014/07/21 11:41:31 6 6 HDREDIT2 2.6 2014/07/21 11:46:47 ? ? CHANGE_FLAGS 2.0 2014/11/20 09:46:36 6 6 $END $REMARKS -CLEAN functions: 2014/06/26 10:41:25 20 Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: P:\Cruise_Data_Processing\2014-27\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2014/06/27 10:52:00 Merge Channel: Bottle_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Event_Number, Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Phaeo-Pigment:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Temperature:Draw, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Ammonium, Flag:Ammonium, pH, Flag:pH, Dimethyl_Sulphide, Flag:Dimethyl_Sulphide Primary file : P:\Cruise_Data_Processing\2014-27\Processing\hydro\2014-27-0007.samavg Secondary file: P:\Cruise_Data_Processing\2014-27\Processing\hydro\2014-27-0007.mrgcln1s -SORT parameters: 2014/06/26 11:19:40 Sorted in ascending order of channel Bottle_Number -CLEAN functions: 2014/06/27 10:52:06 20 Reset #RECS, MIN & MAX values in header. Insert Pad Values in Channel: Fluorescence:URU:Wetlabs:ECO-AFL [mg/m^3] where channel Fluorescence:URU:Wetlabs:ECO-AFL [mg/m^3] is in the range -100 0 data records in pad range. Remove Sea-Bird comments from the header. Remove remark heading: "Comments from secondary" -CALIB parameters: 2014/07/11 09:23:49 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2014-27\Processing\doc\2014-27-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 16 Oxygen:Dissolved:SBE mL/L 10 0.7440000E-01 0.1030000E+01 -SORT parameters: 2014/07/11 09:55:19 Sorted in ascending order of channel Pressure* -REMOVECH 2014/07/11 12:49:15 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Salinity:T0:C0 [PSS-78] Descent_Rate [m/s] Altimeter [metres] Status:Pump Flag -CHANGE units: Temperature reference channel: Temperature:S* Salinity reference channel: Sal* 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg -CHANGE units: Temperature reference channel: Temperature:D* Salinity reference channel: Sal* 'Oxygen:Dissolved' changed from mL/L to umol/kg -CALIB parameters: 2014/07/21 11:41:31 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2014-27\Processing\doc\2014-27-recal2.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 10 Salinity:T1:C1 PSS-78 10 -0.4200000E-02 0.1000000E+01 -HEADER EDITS: 2014/07/21 11:46:47 Applied edit header: P:\Cruise_Data_Processing\2014-27\Processing\doc\HYDRO\2014-27-bot-hdr.txt Channel 1: Bottle:Firing_Sequence [n/a] Name: Bottle_Number ==> Bottle:Firing_Sequence Channel 2: Bottle_Number [n/a] Name: Bottle:Position ==> Bottle_Number Channel 3: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 7: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 11: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 15: Temperature:Draw [deg C (ITS90)] Units: ==> deg C (ITS90) Format: F7.2 ==> F6.1 Channel 16: Salinity:Bottle [PSS-78] Units: ==> PSS-78 Channel 17: Flag:Salinity:Bottle [n/a] Units: ==> n/a Channel 18: Oxygen:Dissolved [mL/L] Units: ==> mL/L Channel 20: Flag:Oxygen:Dissolved [n/a] Units: ==> n/a Channel 21: Nitrate_plus_Nitrite [umol/L] Units: ==> umol/L Channel 22: Flag:Nitrate_plus_Nitrite [n/a] Units: ==> n/a Channel 23: Silicate [umol/L] Units: ==> umol/L Channel 24: Flag:Silicate [n/a] Units: ==> n/a Channel 25: Phosphate [umol/L] Units: ==> umol/L Channel 26: Flag:Phosphate [n/a] Units: ==> n/a Channel 8: PAR:Reference [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 9: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a Channel 6: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:URU:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs $END *COMMENTS Sample_Number 22: OXY-2: Titration noisy rendering the endpoint ambiguous. Replicates omitted from precision calculation Analysis methods: ----------------- Oxygen samples were analyzed at sea on an automated Winkler titration system (Brinkmann Dosimat model 665 for titrations, Dosimat model 865 for dispensing standards and a PC950 Colorimeter controlled by AutoOxy software V3.4) with modifications based on Carpenter (1965) and adhering to WOCE protocols (Culberson 1991). For details including a duplicate analysis, see document QF2014-27OXY*.xls. Salinity samples were collected in 200 mL type ll glass bottles with reusable silicone inserts supplied by Xiamen Cuten Accessories Industry Limited and screw caps supplied by Ocean Scientific International Limited. They were analyzed in a temperature-controlled lab on a Guildline 8400B Salinometer (S/N 68572) standardized with IAPSO standard seawater 4 to 9 days after collection. For details see document QF2014-27SAL*.xls. Nutrient samples were collected in plastic tubes and quick frozen in aluminum blocks stored in -20 freezer. All analysis was performed on frozen samples at IOS. They were analyzed using an Astoria analyzer following methods described in Barwell-Clarke and Whitney (1996). For raw data, precision and duplicate details see spreadsheet QF2014-27nuts*.xls. References: 1. Barwell-Clarke, J. and Whitney, F. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. 2. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 3. Culberson, C.H. 1991. Dissolved oxygen. WOCE Hydrographic Programme Operations and Methods (July 1991). 15pp. * For PDF versions of these papers see folder \\Cruise_Data\DOCUMENTS\Analysis Reference Papers --------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Transmissivity, Fluorescence, pH, PAR and PAR:Reference data are nominal and unedited except that some records were removed in editing temperature and salinity. For details on how the transmissivity calibration parameters were calculated see the document in folder "\cruise_data\documents\transmissivity". Dissolved oxygen was calibrated using the method described in SeaBird Application Note #64-2, June 2012 revision, except that a small offset in the fit was allowed. For this cruise the results of 2014-06 were applied. The PAR:Reference channel was removed from casts #1-3 as there was no signal; there are very low signals from other casts, which are suspicious, but they were left in place. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were available at the time of processing. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. NOTE: The salinity was recalibrated to bring the Salinity:T1:C1 channel into agreement with Salinity:T0:C0, based on observations during later offshore cruises that found the Salinity:T0:C0 was very close to bottles. For details on the processing see the report: 2014-27_Processing_Report.doc. --------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- -------- ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.744E-01 1.03) Salinity:T1:C1 PSS-78 10 -99 () (-0.42E-02 1) $END !1- 2- --3--- ---4---- --5-- ---6--- --7--- --8--- ---9--- ---10--- --11-- --12- -13- -14- --15- ---16--- 17 ---18-- --19- 20 --21- 22 --23- 24 --25-- 26 !Bo Bo Pressu Temperat Trans Fluores PAR PAR: pH:SBE: Salinity Oxygen Oxyge Numb Samp Tempe Salinity Fl Oxygen: Oxyge Fl Nitra Fl Silic Fl Phosph Fl !tt tt re ure: missi cence: Refere Nominal :T1:C1 : n: er_o le_ ratur :Bottle ag Dissolv n: ag te_ ag ate ag ate ag !~u ~u Secondar vity URU: nce Dissol Disso ~bin Numb e: ~o ed Disso ~o plus_ ~t ~i ~p !en mb y Wetlabs ved: lved: _rec er Draw tt lved lv Nitri ri ca ha !ce er SBE SBE ords le ed te te te te !-- -- ------ -------- ----- ------- ------ ------ ------- -------- ------ ----- ---- ---- ----- -------- -- ------- ----- -- ----- -- ----- -- ------ -- *END OF HEADER 6 6 2.4 8.3464 42.1 1.977 187.3 2149.0 7.965 29.6836 6.71 292.9 241 27 10.8 -99.0000 0 6.727 293.7 0 24.1 0 45.9 0 2.08 0 5 5 5.0 8.3552 41.9 2.382 77.9 2124.3 7.964 29.6855 6.72 293.2 241 26 11.1 -99.0000 0 6.725 293.6 0 24.3 0 46.1 0 2.06 0 4 4 10.0 8.3310 42.5 3.892 40.0 2104.8 7.960 29.6898 6.69 292.1 241 25 11.2 -99.0000 0 6.623 289.1 0 24.5 0 46.3 0 2.07 0 3 3 39.8 7.9615 59.4 0.579 0.6 2137.2 7.744 30.1167 4.93 215.0 241 24 11.3 -99.0000 0 4.956 216.3 0 30.7 6 60.4 6 2.57 6 2 2 41.9 7.9623 59.3 0.628 0.4 2250.2 7.744 30.1175 4.92 214.8 241 23 11.8 30.1210 0 4.948 216.0 0 30.7 0 60.5 0 2.58 0 1 1 43.8 7.9623 59.0 0.615 0.3 2231.9 7.744 30.1223 4.91 214.0 241 22 12.4 -99.0000 0 4.947 215.9 46 30.7 0 61.1 0 2.57 0