*2015/04/27 16:26:11.96 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2014/10/01 19:02:37.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 98 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : FDBD8D81 NUMBER OF CHANNELS : 8 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 3 100 2 Temperature:Primary 'deg C (ITS90)' 9.7651 11.7502 3 Fluorescence:URU:Wetlabs mg/m^3 0.228 3.663 4 pH:SBE:Nominal n/a 8.59 8.8 5 Salinity:T0:C0 PSS-78 28.1933 30.9095 6 Oxygen:Dissolved:SBE mL/L 3.112 4.675 7 Oxygen:Dissolved:SBE umol/kg 135.7586 204.3376 8 Number_of_bin_records n/a 1 66 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2014-26\Pro $END *ADMINISTRATION MISSION : 2014-26 AGENCY : 'PBS, Marine Ecosystems and Aquaculture Division,' CONTINUED : ' Nanaimo, B.C.' COUNTRY : Canada PROJECT : Strait of Georgia Juvenile Salmon SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia STATION : SET 55 EVENT NUMBER : 88 LATITUDE : 49 10.04000 N ! (deg min) LONGITUDE : 123 18.62000 W ! (deg min) WATER DEPTH : 109 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0550 $TABLE: SENSORS ! Name Abs Depth Serial No ! --------------------------------- -------------- ---------- Temperature ' ' 2710 Conductivity ' ' 2128 'Pressure:Digiquartz with TC' ' ' 0550 Temperature:2 ' ' 2374 Conductivity:2 ' ' 3396 'Oxygen:SBE 43' ' ' 1176 'Fluorometer:WET Labs ECO-AFL/FL' ' ' 2215 pH ' ' 0852 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.22.4 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.4.1 2015/04/21 16:32:42 6616 6616 CLEAN 5.2.1 2015/04/21 16:38:42 6616 6616 SHIFTDAT 3.4 2015/04/21 16:59:04 6616 6616 SHIFTDAT 3.4 2015/04/21 17:01:02 6616 6616 SHIFTDAT 3.4 2015/04/21 17:11:55 6616 6616 SHIFTDAT 3.4 2015/04/21 17:14:11 6616 6616 DELETE 6.3 2015/04/21 17:15:54 6616 2596 CTDEDIT 5.0.4 2015/04/24 09:36:39 2596 2551 CALIB 11.8.1 2015/04/27 13:56:10 2551 2551 BINAVE 4.2 2015/04/27 13:58:51 2551 98 REMOVECH 8.2 2015/04/27 14:12:10 98 98 CHGUNITS 3.1 2015/04/27 14:13:03 98 98 REORDER 1.3.1 2015/04/27 14:13:10 ? ? HDREDIT2 3.0.2 2015/04/27 16:26:11 ? ? $END $REMARKS -CLEAN functions: 2015/04/21 16:37:52 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure Insert Pad Values in Channel: Fluorescence:URU:Wetlabs:ECO-AFL [mg/m^3] where channel Fluorescence:URU:Wetlabs:ECO-AFL [mg/m^3] is in the range -1000 217 data records in pad range. Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:URU:Wetlabs:ECO-AFL [mg/m^3 # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.70 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary [S/m] # of Records to Advance (-ve for Delay): At REC# 0 Shift= -1.30 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE [pH Units] # of Records to Advance (-ve for Delay): At REC# 0 Shift= 55.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 89.92 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT v5.0.4 2015/04/24 09:36:39 45 records were deleted in this editing session. No data values were changed. -CALIB parameters: 2015/04/27 13:56:10 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2014-26\Processing\doc\2014-26-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 12 Salinity:T0:C0 PSS-78 10 0.2000000E-02 0.1000000E+01 14 Oxygen:Dissolved:SBE mL/L 10 0.1420000E-01 0.1050200E+01 -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Bin value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2015/04/27 14:12:10 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: Temperature reference channel: Temperature:Primary Salinity reference channel: Salinity:T0:C0 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2015/04/27 16:26:11 Applied edit header: P:\Cruise_Data_Processing\2014-26\Processing\doc\2014-26-HDR.TXT Channel 1: Pressure [decibar] Format: F10.3 ==> F7.1 Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:URU:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2014-26\2014-26-0088.hex Software Version Seasave V 7.22.4 Temperature SN = 2710 Conductivity SN = 2128 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Oct 02 2014 12:05:18 NMEA Latitude = 49 10.04 N NMEA Longitude = 123 18.62 W NMEA UTC (Time) = Oct 01 2014 19:02:37 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> W.E. Ricker 2014-26 Station: Set 55 Bottom Depth(m): 109m System UTC = Oct 02 2014 11:05:18 # nquan = 15 # nvalues = 6616 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 0.5 # name 14 = flag: flag # span 0 = 1, 6616 # span 1 = -1.588, 99.919 # span 2 = 9.7599, 14.3447 # span 3 = 9.7600, 14.4069 # span 4 = 0.138290, 3.427801 # span 5 = 0.110452, 3.427351 # span 6 = -0.0183, 7.4262 # span 7 = 1.2613, 2.1062 # span 8 = 8.562, 9.397 # span 9 = -1.583, 2.160 # span 10 = 0, 1 # span 11 = 0.9065, 30.9085 # span 12 = 0.7164, 30.9045 # span 13 = 2.88653, 7.02638 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Oct 01 2014 19:02:37 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2710 # 31-Jan-13 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36715380e-003 # 6.46576903e-004 # 2.33953737e-005 # 2.19507139e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Jan-13 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.02028018e+001 # 1.46419864e+000 # -3.32636380e-003 # 3.25151678e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0550 # 25-Mar-13 # -4.232943e+004 # 1.065076e-001 # 1.464900e-002 # 3.694200e-002 # 0.000000e+000 # 3.041883e+001 # -3.536199e-004 # 4.388420e-006 # 2.583800e-009 # 0.99988778 # -0.12341 # 0.000000e+000 # 1.286170e-002 # -9.445820e+000 # # # # # # 2374 # 31-Jan-13 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.34913123e-003 # 6.45506956e-004 # 2.32986392e-005 # 2.17320090e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3396 # 30-Jan-13 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -9.92108035e+000 # 1.31524483e+000 # -2.66264865e-004 # 8.33352189e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 1176 # 05-Mar-13 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 6.2702e-001 # -0.5178 # -3.7667e-003 # 1.4548e-004 # -2.8367e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.7500e-002 # 2.2100 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2215 # # 1.30000000e+001 # # 0.0185 # # # # # # 0852 # 21-apr-11 # 4.6009 # 2.5060 # # # # # # # # # # # # # datcnv_date = Apr 21 2015 15:11:49, 7.22.5 [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2014-26\RAW\CTD\2014-26-0088.hex P:\Crui se_Data_Processing\2014-26\Processing\doc\2014-26-ctd.XMLCON # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # alignctd_date = Apr 21 2015 15:51:16, 7.22.5 # alignctd_in = P:\Cruise_Data_Processing\2014-26\Processing\convert\2014-26-008 8.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Apr 21 2015 15:52:55, 7.22.5 # celltm_in = P:\Cruise_Data_Processing\2014-26\Processing\align\2014-26-0088.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Apr 21 2015 15:56:26, 7.22.5 [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2014-26\Processing\celltm\2014-26-0088.c nv P:\Cruise_Data_Processing\2014-26\Processing\doc\2014-26-ctd.XMLCON # derive_time_window_docdt = seconds: 0.5 # derive_ox_tau_correction = yes # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some records near the top and bottom of the cast. ---------------------------------------------------------------------------------- Data Processing Notes: ---------------------- Fluorescence and pH data are nominal and unedited except that some records were removed in editing temperature and salinity. Dissolved oxygen was calibrated using the results of cruise 2014-01 when the same sensor was used. There was no calibration sampling from this cruise. Recalibration of the salinity channel was based on a report from the factory on drift in the temperature and conductivity sensors as of 23 December 2014 and 3 March 2015, respectively. That report shows the primary salinity had drifted low by about 0.002. This was the 7th of 8 cruises between the factory checks so it was estimated that about the CTD salinity was reading low by about 0.002. For casts that have no data above 10m due to acquisition starting late, upcast files were created with names with the format 2014-26-9***.ctd; the upcast data are considered to be of lower quality due to the CTD package entraining some deeper water through which the sensors must past. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were collected. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see the report: 2014-26_Processing_Report.doc. ---------------------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- -------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (0.2E-02 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (0.142E-01 1.0502) $END !--1--- ---2---- ---3--- ---4--- ---5---- --6--- --7-- -8-- !Pressu Temperat Fluores pH:SBE: Salinity Oxygen Oxyge Numb !re ure: cence: Nominal :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- ------- -------- ------ ----- ---- *END OF HEADER 3.0 11.6249 3.109 8.796 28.1933 4.67 204.3 1 4.0 11.6694 3.408 8.800 28.2020 4.30 187.8 22 5.0 11.7502 3.663 8.799 28.5016 3.65 159.5 25 6.0 11.0351 2.665 8.765 29.0774 3.49 152.6 27 7.0 10.6856 1.380 8.720 29.2110 3.47 151.5 26 8.0 10.5135 0.881 8.678 29.2574 3.50 153.0 25 9.0 10.2929 0.714 8.643 29.3716 3.54 154.4 26 10.0 10.1237 0.608 8.621 29.4538 3.56 155.5 26 11.0 10.0339 0.513 8.608 29.5286 3.59 156.8 26 12.0 9.9894 0.430 8.599 29.5807 3.60 157.1 24 13.0 9.9262 0.403 8.595 29.6241 3.59 156.5 24 14.0 9.8926 0.420 8.591 29.6496 3.56 155.6 26 15.0 9.8533 0.343 8.590 29.6601 3.56 155.6 25 16.0 9.8240 0.309 8.591 29.7162 3.56 155.6 26 17.0 9.8151 0.275 8.591 29.7570 3.57 155.6 25 18.0 9.8064 0.264 8.595 29.7758 3.57 156.0 26 19.0 9.7908 0.266 8.598 29.8080 3.57 156.0 25 20.0 9.7651 0.275 8.601 29.8637 3.55 155.0 25 21.0 9.7678 0.253 8.605 29.8943 3.53 154.0 26 22.0 9.7962 0.261 8.606 29.9364 3.51 153.3 25 23.0 9.8150 0.283 8.607 29.9581 3.46 150.9 24 24.0 9.8420 0.248 8.609 30.0138 3.41 148.9 26 25.0 9.9294 0.250 8.612 30.1019 3.35 146.0 25 26.0 10.0008 0.252 8.613 30.1480 3.33 145.5 25 27.0 10.0618 0.255 8.614 30.1954 3.34 145.7 25 28.0 10.0609 0.249 8.617 30.2152 3.34 145.6 26 29.0 10.0937 0.241 8.619 30.2515 3.34 145.5 24 30.0 10.1452 0.228 8.621 30.2690 3.34 145.9 25 31.0 10.1764 0.248 8.623 30.2778 3.24 141.5 24 32.0 10.2001 0.240 8.621 30.2850 3.15 137.3 23 33.0 10.3242 0.231 8.621 30.3359 3.12 136.2 24 34.0 10.4181 0.250 8.624 30.3854 3.12 136.0 24 35.0 10.4174 0.272 8.626 30.3965 3.13 136.4 24 36.0 10.4159 0.251 8.628 30.4039 3.14 136.9 24 37.0 10.4080 0.249 8.630 30.4103 3.14 137.0 24 38.0 10.3938 0.249 8.631 30.4193 3.15 137.6 24 39.0 10.3876 0.244 8.629 30.4612 3.13 136.5 25 40.0 10.3906 0.238 8.630 30.4657 3.11 135.8 24 41.0 10.4115 0.232 8.629 30.4862 3.12 136.0 26 42.0 10.4211 0.252 8.628 30.4987 3.14 136.8 25 43.0 10.4135 0.252 8.629 30.5010 3.17 138.1 25 44.0 10.4107 0.258 8.630 30.5111 3.17 138.5 25 45.0 10.4093 0.266 8.630 30.5279 3.18 138.8 25 46.0 10.4130 0.263 8.632 30.5409 3.19 139.2 26 47.0 10.4159 0.271 8.634 30.5571 3.20 139.5 26 48.0 10.4198 0.266 8.635 30.5707 3.20 139.4 26 49.0 10.4222 0.262 8.635 30.5787 3.19 139.1 26 50.0 10.4235 0.262 8.637 30.5854 3.20 139.6 27 51.0 10.4289 0.277 8.639 30.6020 3.19 139.3 26 52.0 10.4322 0.268 8.640 30.6103 3.19 139.4 26 53.0 10.4325 0.265 8.639 30.6161 3.20 139.7 27 54.0 10.4350 0.271 8.639 30.6222 3.21 139.9 27 55.0 10.4399 0.280 8.639 30.6356 3.20 139.4 25 56.0 10.4445 0.272 8.640 30.6481 3.20 139.4 26 57.0 10.4462 0.268 8.639 30.6624 3.21 140.1 26 58.0 10.4440 0.272 8.641 30.6729 3.23 140.8 25 59.0 10.4359 0.268 8.644 30.6873 3.25 141.8 26 60.0 10.4198 0.266 8.644 30.6997 3.24 141.2 27 61.0 10.4167 0.273 8.645 30.7044 3.24 141.5 26 62.0 10.4112 0.289 8.643 30.7053 3.23 140.9 25 63.0 10.4081 0.300 8.643 30.7049 3.22 140.3 25 64.0 10.4051 0.297 8.644 30.7066 3.21 140.2 27 65.0 10.4021 0.281 8.642 30.7103 3.24 141.3 26 66.0 10.3974 0.291 8.642 30.7158 3.23 141.1 25 67.0 10.3897 0.291 8.642 30.7234 3.26 142.1 25 68.0 10.3867 0.308 8.644 30.7277 3.26 142.4 26 69.0 10.3822 0.297 8.644 30.7347 3.26 142.3 26 70.0 10.3774 0.292 8.645 30.7405 3.27 142.6 26 71.0 10.3679 0.306 8.645 30.7473 3.26 142.2 26 72.0 10.3593 0.298 8.645 30.7575 3.26 142.1 27 73.0 10.3565 0.295 8.645 30.7618 3.26 142.0 25 74.0 10.3186 0.305 8.645 30.7983 3.27 142.4 26 75.0 10.3068 0.314 8.645 30.8090 3.26 142.3 26 76.0 10.3012 0.322 8.645 30.8144 3.26 142.2 27 77.0 10.2867 0.308 8.645 30.8281 3.25 141.9 26 78.0 10.2785 0.311 8.645 30.8357 3.27 142.8 27 79.0 10.2676 0.332 8.645 30.8455 3.27 142.6 28 80.0 10.2669 0.326 8.644 30.8462 3.26 142.0 28 81.0 10.2670 0.330 8.644 30.8464 3.27 142.7 27 82.0 10.2582 0.311 8.645 30.8544 3.27 142.6 26 83.0 10.2484 0.333 8.645 30.8635 3.27 142.7 28 84.0 10.2396 0.358 8.645 30.8722 3.27 142.6 28 85.0 10.2219 0.329 8.644 30.8904 3.27 142.8 28 86.0 10.2166 0.338 8.643 30.8961 3.27 142.7 27 87.0 10.2120 0.329 8.643 30.9016 3.27 142.7 27 88.0 10.2106 0.348 8.642 30.9033 3.26 142.1 27 89.0 10.2111 0.334 8.642 30.9032 3.26 142.3 29 90.0 10.2115 0.342 8.641 30.9036 3.26 142.2 28 91.0 10.2123 0.369 8.641 30.9029 3.26 142.1 26 92.0 10.2114 0.376 8.641 30.9042 3.25 141.6 28 93.0 10.2117 0.375 8.641 30.9042 3.27 142.5 28 94.0 10.2106 0.372 8.641 30.9054 3.26 142.1 27 95.0 10.2114 0.397 8.640 30.9047 3.25 141.9 27 96.0 10.2130 0.374 8.640 30.9028 3.26 142.0 27 97.0 10.2133 0.376 8.639 30.9028 3.26 142.3 66 98.0 10.2120 0.361 8.638 30.9047 3.25 141.8 32 99.0 10.2101 0.372 8.636 30.9072 3.26 142.3 47 100.0 10.2082 0.374 8.636 30.9095 3.26 142.1 6