*2015/07/27 09:23:08.90 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2014/06/05 13:39:27.000 TIME INCREMENT : 0 0 0 0.125 0 ! (day hr min sec ms) NUMBER OF RECORDS : 103 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 7E9AE956 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- ----------------------- --------------- -------------- -------------- 1 Pressure decibar 1.286 103.004 2 Temperature:Primary 'deg C (ITS90)' 9.9564 10.0207 3 pH:SBE:Nominal n/a 8.609 8.661 4 Salinity:T0:C0 PSS-78 29.4964 29.5446 5 Oxygen:Dissolved:SBE mL/L 5.3928 5.452721 6 Oxygen:Dissolved:SBE umol/kg 235.4 238.075 7 Number_of_bin_records n/a 7 18 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2014-24\Pro $END *ADMINISTRATION MISSION : 2014-24 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : Strait of Georgia Juvenile Salmon SCIENTIST : Neville C. PLATFORM : Viking Storm *LOCATION GEOGRAPHIC AREA : Strait of Georiga STATION : Set 24 EVENT NUMBER : 39 LATITUDE : 50 18.30000 N ! (deg min) LONGITUDE : 125 18.60000 W ! (deg min) WATER DEPTH : 114 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-25 SERIAL NUMBER : 0404 $TABLE: SENSORS ! Name Abs Depth Serial No ! ----------------------- -------------- ---------- Temperature ' ' 4484 Conductivity ' ' 3184 'Pressure:Strain Gauge' ' ' 0573 pH ' ' 0852 'Oxygen:SBE 43' ' ' 0047 $END $REMARKS SOFTWARE VERSION 1.59 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.4.1 2015/07/10 12:56:52 3622 3622 CLEAN 5.2.1 2015/07/10 12:57:15 3622 3622 MERGEHDR 1.3 2015/07/24 10:23:23 3622 3622 ADTIMCH 4.4 2015/07/24 10:48:10 3622 3622 SHIFTDAT 3.4 2015/07/24 13:13:51 3622 3622 DELETE 6.3 2015/07/24 13:30:43 3622 1396 CTDEDIT 5.0.4 2015/07/24 15:10:40 1396 1365 BINAVE 4.2 2015/07/26 15:13:54 1365 103 REMOVECH 8.2 2015/07/26 15:43:44 103 103 CHGUNITS 3.1 2015/07/26 15:46:53 103 103 REORDER 1.3.1 2015/07/27 08:50:35 ? ? CALIB 11.8.1 2015/07/27 08:51:01 103 103 HDREDIT2 3.0.2 2015/07/27 09:23:08 ? ? $END $REMARKS -CLEAN functions: 2015/07/10 12:57:10 20 Reset #RECS, MIN & MAX values in header. Interpolation by Record Number, in Pressure:StrainGauge Set event to last 4 characters of file name -The following ADTIMCH parameters were used. Add 7.00 hours to times in header file section -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= 0.50 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure NOT filtered. Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 5 points) will be deleted. Drop rate applies in the range 10.00 to 93.38 dbars Sample interval (from FILE section of header) = 0.125 seconds. -CTDEDIT v5.0.4 2015/07/24 15:10:40 31 records were deleted in this editing session. 12 changes in channel Salinity:T0:C0 -The following BINAVE parameters were used: Bin channel = Pressure:StrainGauge Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2015/07/26 15:43:44 The following CHANNEL(S) were removed: Scan_Number Conductivity:Primary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Flag -CHANGE units: Temperature reference channel: Temperature:Primary Salinity reference channel: Salinity:T0:C0 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -CALIB parameters: 2015/07/27 08:51:01 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2014-24\Processing\doc\2014-24-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 4 Salinity:T0:C0 PSS-78 10 0.7000000E-02 0.1000000E+01 5 Oxygen:Dissolved:SBE [mL/L] mL/L 10 0.0000000E+00 0.1070000E+01 6 Oxygen:Dissolved:SBE [umol/kg umol/kg 10 0.0000000E+00 0.1070000E+01 -HEADER EDITS: 2015/07/27 09:23:08 Applied edit header: P:\Cruise_Data_Processing\2014-24\Processing\doc\2014-24-HDR.TXT Channel 1: Pressure [decibar] Name: Pressure:StrainGauge ==> Pressure Format: F10.3 ==> F7.1 Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 3: pH:SBE:Nominal [n/a] Name: pH:SBE ==> pH:SBE:Nominal Units: pH Units ==> n/a $END *COMMENTS SBE HEADER Sea-Bird SBE25 Data File: FileName = C:\Users\WaterProperties-16\Desktop\Neville 2014-08\2014-24-0039000 .hex Software Version 1.59 Temperature SN = 4484 Conductivity SN = 3184 System UpLoad Time = Jun 05 2014 21:17:00 2014-24 -Set 24 Neville - SOG Juvenile Salmon 114 m ds SBE 25 CTD V 4.1c SN 0404 06/05/14 21:13:20.772 external pressure sensor, range = 1450 psia, tcval = -32 xtal = 9437232 clk = 32768.206 vmain = 11.7 iop = 174 vlith = 5.4 ncasts = 5 samples = 26835 free = 735406 lwait = 0 msec CTD configuration: number of scans averaged = 1, data stored at 8 scans per second real time data transmitted at 1 scans per second minimum conductivity frequency for pump turn on = 3000 pump delay = 45 seconds battery type = ALKALINE 2 external voltages sampled stored voltage # 0 = external voltage 4 stored voltage # 1 = external voltage 5 S> dh cast 0 06/05 06:39:27 smpls 0 to 3621 nv = 2 avg = 1 stp = switch of S> # nquan = 10 # nvalues = 3622 # units = specified # name 0 = scan: Scan Count # name 1 = prSM: Pressure, Strain Gauge [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = c0S/m: Conductivity [S/m] # name 4 = sbeox0V: Oxygen raw, SBE 43 [V] # name 5 = ph: pH # name 6 = dz/dtM: Descent Rate [m/s] # name 7 = sal00: Salinity, Practical [PSU] # name 8 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 1 # name 9 = flag: flag # span 0 = 1, 3622 # span 1 = -0.047, 103.384 # span 2 = 9.7410, 11.0116 # span 3 = 0.002397, 3.279197 # span 4 = 0.0000, 2.6325 # span 5 = -2.704, 8.661 # span 6 = -0.855, 0.809 # span 7 = 0.0180, 29.6163 # span 8 = -26.7643, 20.8575 # span 9 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.125 # start_time = Jun 05 2014 06:39:27 [Instrument's time stamp, header] # bad_flag = -9.990e-29 # # # # # 4484 # 27-Mar-12 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.39927478e-003 # 6.40237498e-004 # 2.13708788e-005 # 1.80396545e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3184 # 21-Mar-12 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.02203365e+001 # 1.42981964e+000 # -2.27200653e-004 # 9.38032659e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0573 # 01-Mar-12 # 9.200504e+002 # -2.513562e-001 # -2.051144e-008 # 0.20000 # # # # # # 0852 # 21-apr-11 # 4.6009 # 2.5060 # # # # # # 0047 # 21-Apr-12 # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 5.2834e-001 # -0.6088 # -1.0307e-002 # 1.9950e-004 # -1.9680e-006 # 2.5826e+000 # 1.92634e-004 # -4.64803e-002 # 3.6000e-002 # 1.1800 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # datcnv_date = Jul 09 2015 16:11:16, 7.23.2 [datcnv_vars = 7] # datcnv_in = P:\Cruise_Data_Processing\2014-24\RAW\CTD\2014-24-0039.hex P:\Crui se_Data_Processing\2014-24\Processing\doc\2014-24-ctd.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wfilter_date = Jul 09 2015 17:27:15, 7.23.2 # wfilter_in = P:\Cruise_Data_Processing\2014-24\Processing\convert\2014-24-0039 .cnv # wfilter_excl_bad_scans = yes # wfilter_action prSM = cosine, 5 # wfilter_action t090C = cosine, 5 # wfilter_action c0S/m = cosine, 5 # alignctd_date = Jul 10 2015 10:09:09, 7.23.2 # alignctd_in = P:\Cruise_Data_Processing\2014-24\Processing\wfilter\2014-24-003 9.cnv # alignctd_adv = sbeox0V 2.500 # celltm_date = Jul 10 2015 11:37:52, 7.23.2 # celltm_in = P:\Cruise_Data_Processing\2014-24\Processing\align\2014-24-0039.cn v # celltm_alpha = 0.0400, 0.0000 # celltm_tau = 8.0000, 0.0000 # celltm_temp_sensor_use_for_cond = primary, # Derive_date = Jul 10 2015 12:51:48, 7.23.2 [derive_vars = 2] # Derive_in = P:\Cruise_Data_Processing\2014-24\Processing\celltm\2014-24-0039.c nv P:\Cruise_Data_Processing\2014-24\Processing\doc\2014-24-ctd.xmlcon # derive_time_window_docdt = seconds: 1 # derive_ox_tau_correction = yes # file_type = ascii END* Remarks from CTDEDIT: CTDEDIT was used to remove some records from the surface; salinity was cleaned lightly. Data Processing Notes: ---------------------- There was no salinity calibration sampling. Recalibration was based on a post-cruise calibration and an assumption that drift occurred gradually. Oxygen:Dissolved:SBE and pH:SBE data are nominal. The only editing applied directly was to remove some obviously bad pH and DO data. Other data were removed when whole records were removed in editing temperature and salinity. Oxygen:Dissolved:SBE data were recalibrated using the results of 3 earlier cruises when the same sensor was used and there was calibration sampling. WARNING: The pH:SBE:Nominal data should be used with caution; no field calibration data were collected. Calibration is required for each cast to get absolute values, although general trends within a cast are likely real. For details on the processing see processing report: 2014-24-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS !Name Units Fmla Pad Coefficients !-------------------------------- --------- ---- ------ ------------ Salinity:T0:C0 PSS-78 10 -99 () (0.7E-02 1) 'Oxygen:Dissolved:SBE [mL/L]' mL/L 10 -99 () (0 1.07) 'Oxygen:Dissolved:SBE [umol/kg]' umol/kg 10 -99 () (0 1.07) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat pH:SBE: Salinity Oxygen Oxyge Numb !re ure: Nominal :T0:C0 : n: er_o ! Primary Dissol Disso ~bin ! ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 1.3 10.0190 8.661 29.4964 5.44 237.4 7 2.0 10.0179 8.661 29.4966 5.41 236.3 12 3.0 10.0180 8.660 29.4970 5.44 237.3 12 4.0 10.0194 8.658 29.4970 5.43 237.2 13 5.0 10.0180 8.657 29.4968 5.45 237.8 13 6.0 10.0180 8.657 29.4967 5.44 237.3 13 7.0 10.0194 8.657 29.4980 5.42 236.5 13 8.0 10.0196 8.656 29.4985 5.45 237.9 12 9.0 10.0207 8.656 29.4984 5.43 237.1 11 10.0 10.0201 8.656 29.4984 5.43 237.2 12 11.0 10.0195 8.656 29.4974 5.42 236.8 12 12.0 10.0188 8.656 29.4969 5.42 236.8 12 13.0 10.0186 8.656 29.4973 5.44 237.5 12 14.0 10.0188 8.656 29.4976 5.45 238.0 12 15.0 10.0191 8.655 29.4978 5.44 237.3 13 16.0 10.0195 8.654 29.4985 5.41 235.9 12 17.0 10.0196 8.655 29.4984 5.42 236.6 13 18.0 10.0195 8.654 29.4988 5.39 235.4 12 19.0 10.0192 8.655 29.4992 5.43 237.0 12 20.0 10.0183 8.655 29.5000 5.44 237.3 13 21.0 10.0167 8.654 29.5017 5.44 237.3 13 22.0 10.0145 8.655 29.5037 5.44 237.4 13 23.0 10.0159 8.654 29.5024 5.44 237.6 11 24.0 10.0159 8.653 29.5025 5.43 237.2 13 25.0 10.0174 8.653 29.5014 5.43 237.2 13 26.0 10.0178 8.652 29.5013 5.42 236.8 12 27.0 10.0186 8.651 29.5009 5.43 236.9 12 28.0 10.0182 8.651 29.5014 5.45 237.8 14 29.0 10.0174 8.648 29.5020 5.45 237.9 12 30.0 10.0157 8.647 29.5033 5.43 237.0 12 31.0 10.0133 8.644 29.5052 5.41 236.0 13 32.0 10.0107 8.639 29.5072 5.43 237.1 12 33.0 10.0094 8.634 29.5084 5.43 237.2 12 34.0 10.0066 8.629 29.5105 5.44 237.4 13 35.0 10.0060 8.623 29.5110 5.43 237.0 12 36.0 10.0053 8.618 29.5115 5.42 236.6 13 37.0 10.0034 8.613 29.5127 5.42 236.8 13 38.0 10.0003 8.611 29.5149 5.44 237.3 12 39.0 10.0030 8.609 29.5131 5.43 237.2 13 40.0 10.0027 8.609 29.5136 5.43 237.0 13 41.0 10.0044 8.609 29.5122 5.42 236.8 13 42.0 10.0049 8.611 29.5120 5.43 236.9 12 43.0 10.0071 8.610 29.5106 5.42 236.7 12 44.0 10.0050 8.613 29.5122 5.43 237.0 14 45.0 10.0027 8.614 29.5138 5.42 236.7 13 46.1 10.0011 8.614 29.5149 5.42 236.8 14 47.0 10.0039 8.615 29.5131 5.41 236.0 12 48.0 10.0034 8.615 29.5136 5.42 236.6 13 49.0 10.0022 8.617 29.5143 5.43 237.0 14 50.0 10.0003 8.617 29.5158 5.44 237.3 14 51.0 9.9962 8.618 29.5187 5.43 237.1 13 52.0 9.9946 8.618 29.5197 5.42 236.5 14 53.0 9.9972 8.618 29.5179 5.44 237.4 14 54.0 10.0004 8.618 29.5161 5.43 237.0 14 55.0 10.0002 8.618 29.5165 5.42 236.7 15 56.0 10.0005 8.620 29.5163 5.43 237.0 13 57.0 9.9988 8.620 29.5175 5.42 236.7 14 58.0 9.9946 8.621 29.5204 5.42 236.6 14 59.0 9.9946 8.622 29.5203 5.43 237.0 13 60.0 9.9938 8.622 29.5210 5.44 237.4 14 61.0 9.9935 8.622 29.5215 5.43 237.1 15 62.0 9.9929 8.622 29.5220 5.43 237.1 13 63.0 9.9930 8.622 29.5220 5.43 237.0 14 64.0 9.9943 8.622 29.5212 5.44 237.3 14 65.0 9.9944 8.623 29.5212 5.43 237.1 13 66.0 9.9946 8.623 29.5211 5.43 237.1 13 67.0 9.9944 8.621 29.5214 5.42 236.5 14 68.0 9.9943 8.621 29.5214 5.43 236.9 14 69.0 9.9942 8.620 29.5214 5.43 237.0 13 70.0 9.9932 8.620 29.5222 5.43 236.9 13 71.0 9.9911 8.619 29.5242 5.42 236.5 14 72.0 9.9902 8.619 29.5249 5.42 236.7 14 73.0 9.9908 8.619 29.5244 5.42 236.5 13 74.0 9.9933 8.618 29.5230 5.42 236.6 13 75.0 9.9918 8.619 29.5241 5.43 236.9 15 76.0 9.9905 8.618 29.5250 5.42 236.6 13 76.9 9.9892 8.618 29.5263 5.43 236.9 15 78.0 9.9881 8.618 29.5273 5.44 237.5 13 79.0 9.9863 8.618 29.5284 5.43 237.2 14 80.0 9.9851 8.618 29.5293 5.44 237.3 13 81.0 9.9822 8.618 29.5313 5.44 237.4 13 82.0 9.9803 8.617 29.5327 5.43 237.1 14 83.0 9.9749 8.618 29.5357 5.43 237.1 13 84.0 9.9704 8.617 29.5373 5.45 237.8 14 85.0 9.9694 8.616 29.5376 5.44 237.4 13 86.0 9.9652 8.616 29.5390 5.43 237.2 15 87.0 9.9650 8.615 29.5393 5.42 236.8 14 88.0 9.9654 8.615 29.5390 5.45 237.6 15 89.0 9.9652 8.614 29.5391 5.44 237.6 14 90.0 9.9641 8.614 29.5398 5.43 237.2 14 91.0 9.9667 8.614 29.5384 5.45 237.8 15 92.0 9.9633 8.614 29.5403 5.44 237.6 14 93.0 9.9641 8.614 29.5402 5.43 237.1 15 94.0 9.9662 8.614 29.5389 5.42 236.8 15 95.0 9.9670 8.614 29.5386 5.43 237.2 15 96.0 9.9564 8.613 29.5446 5.44 237.4 15 97.0 9.9631 8.614 29.5410 5.42 236.7 13 98.0 9.9632 8.612 29.5411 5.43 237.2 15 99.0 9.9653 8.613 29.5399 5.44 237.3 14 100.0 9.9651 8.613 29.5400 5.45 238.1 14 101.0 9.9670 8.612 29.5392 5.44 237.4 16 102.0 9.9654 8.614 29.5401 5.44 237.3 13 103.0 9.9605 8.612 29.5428 5.42 236.6 18